Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G217100 Populus trichocarpa HOM05D006517 ORTHO05D007886 3.9e-149 531.6 295 100.0
Potri.018G047000 Populus trichocarpa HOM05D006517 ORTHO05D007886 5.5e-127 458.0 295 77.3
Sabra06G0167400 Salix brachista HOM05D006517 ORTHO05D007886 4.5e-113 411.8 302 71.5
Manes.03G055100 Manihot esculenta HOM05D006517 ORTHO05D007886 2.3e-109 399.4 291 68.4
CiPaw.03G198900 Carya illinoinensis HOM05D006517 ORTHO05D007886 2.8e-102 375.9 295 64.4
QL11p003516 Quercus lobata HOM05D006517 ORTHO05D007886 1.1e-101 374.0 280 67.1
Thecc.09G067300 Theobroma cacao HOM05D006517 ORTHO05D007886 4.0e-101 372.1 282 70.9
GSVIVG01000273001 Vitis vinifera HOM05D006517 ORTHO05D007886 5.2e-101 371.7 286 63.3
Duzib168G1027 Durio zibethinus HOM05D006517 ORTHO05D007886 2.0e-100 369.8 282 66.7
Atru.chr7.1806 Acer truncatum HOM05D006517 ORTHO05D007886 2.6e-100 369.4 281 65.5
Cfa010680 Carpinus fangiana HOM05D006517 ORTHO05D007886 1.7e-99 366.7 280 65.0
Gohir.D08G268100 Gossypium hirsutum HOM05D006517 ORTHO05D007886 2.9e-99 365.9 283 64.0
Gorai.004G285800 Gossypium raimondii HOM05D006517 ORTHO05D007886 2.9e-99 365.9 283 64.0
Duzib150G1397 Durio zibethinus HOM05D006517 ORTHO05D007886 3.7e-99 365.5 288 64.9
Medtr4g124370 Medicago truncatula HOM05D006517 ORTHO05D007886 7.0e-98 361.3 285 63.5
COL.COLO4_21178 Corchorus olitorius HOM05D006517 ORTHO05D007886 3.5e-97 359.0 282 64.2
Lalb_Chr13g0299091 Lupinus albus HOM05D006517 ORTHO05D007886 7.8e-97 357.8 287 63.1
Glyma.13G116000 Glycine max HOM05D006517 ORTHO05D007886 1.7e-96 356.7 287 63.8
Gohir.A08G246900 Gossypium hirsutum HOM05D006517 ORTHO05D007886 3.9e-96 355.5 283 62.5
Prupe.7G189300 Prunus persica HOM05D006517 ORTHO05D007886 3.9e-96 355.5 280 64.3
Ciclev10009053m.g Citrus clementina HOM05D006517 ORTHO05D007886 1.1e-95 354.0 282 71.6
TAR383G1010 Trochodendron aralioides HOM05D006517 ORTHO05D007886 1.5e-95 353.6 289 59.9
Eucgr.C00754 Eucalyptus grandis HOM05D006517 ORTHO05D007886 5.6e-95 351.7 280 63.2
MD15G1225700 Malus domestica HOM05D006517 ORTHO05D007886 9.5e-95 350.9 281 71.9
THA.LOC104804445 Tarenaya hassleriana HOM05D006517 ORTHO05D007886 2.8e-94 349.4 282 61.7
Ca_21351_v3 Cicer arietinum L. HOM05D006517 ORTHO05D007886 4.7e-94 348.6 290 62.4
CSS0016512 Camellia sinensis var. sinensis HOM05D006517 ORTHO05D007886 8.1e-94 347.8 287 60.3
CANSAT56G3804 Cannabis sativa HOM05D006517 ORTHO05D007886 5.2e-93 345.1 281 74.0
Glyma.17G043800 Glycine max HOM05D006517 ORTHO05D007886 5.2e-93 345.1 287 62.7
Lj4g0027818 Lotus japonicus HOM05D006517 ORTHO05D007886 6.8e-93 344.7 292 60.3
RcHm_v2.0_Chr2g0096541 Rosa chinensis HOM05D006517 ORTHO05D007886 3.4e-92 342.4 280 62.9
CANSAT56G0784 Cannabis sativa HOM05D006517 ORTHO05D007886 5.8e-92 341.7 281 73.3
TPR.G12541 Trifolium pratense HOM05D006517 ORTHO05D007886 2.9e-91 339.3 285 61.8
PGR124G0001 Punica granatum HOM05D006517 ORTHO05D007886 3.7e-91 339.0 283 62.2
PGR142G0057 Punica granatum HOM05D006517 ORTHO05D007886 3.7e-91 339.0 283 62.2
Dinv42443 Davidia involucrata HOM05D006517 ORTHO05D007886 1.3e-88 330.5 280 59.6
Oeu000272.2 Olea europaea HOM05D006517 ORTHO05D007886 5.1e-88 328.6 282 58.9
Nitab4.5_0000987g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 2.8e-86 322.8 284 57.0
Migut.J00866 Erythranthe guttata HOM05D006517 ORTHO05D007886 3.6e-86 322.4 281 59.1
Phvul.003G125800 Phaseolus vulgaris HOM05D006517 ORTHO05D007886 3.6e-86 322.4 286 59.4
PSO675G5415 Papaver somniferum HOM05D006517 ORTHO05D007886 6.2e-86 321.6 280 63.6
PSO541G2149 Papaver somniferum HOM05D006517 ORTHO05D007886 1.1e-85 320.9 280 63.9
MD02G1105800 Malus domestica HOM05D006517 ORTHO05D007886 6.8e-85 318.2 280 68.6
FAN23G1398 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.2e-84 317.4 280 63.6
ClCG03G014700 Citrullus lanatus HOM05D006517 ORTHO05D007886 1.5e-84 317.0 278 56.8
Lsat_1_v5_gn_8_118080 Lactuca sativa HOM05D006517 ORTHO05D007886 7.6e-84 314.7 280 56.1
CsaV3_1G041470 Cucumis sativus L. HOM05D006517 ORTHO05D007886 1.7e-83 313.5 280 55.4
ATR0006G021 Amborella trichopoda HOM05D006517 ORTHO05D007886 1.1e-82 310.8 287 56.4
unitig_26.g9120 Utricularia gibba HOM05D006517 ORTHO05D007886 5.4e-82 308.5 291 55.3
CAN.G55.2 Capsicum annuum HOM05D006517 ORTHO05D007886 7.1e-82 308.1 287 54.7
FvH4_1g09680 Fragaria vesca HOM05D006517 ORTHO05D007886 9.2e-82 307.8 280 62.9
FAN26G1998 Fragaria x ananassa HOM05D006517 ORTHO05D007886 9.2e-82 307.8 280 62.9
HanXRQChr09g0258421 Helianthus annuus HOM05D006517 ORTHO05D007886 4.6e-81 305.4 282 55.3
Sc18g0002960 Simmondsia chinensis HOM05D006517 ORTHO05D007886 1.3e-80 303.9 280 56.8
MELO3C015558.2 Cucumis melo HOM05D006517 ORTHO05D007886 2.3e-80 303.1 281 56.6
Sed0014627 Sechium edule HOM05D006517 ORTHO05D007886 3.0e-80 302.8 289 54.3
Aqoxy7G00916 Aquilegia oxysepala HOM05D006517 ORTHO05D007886 6.6e-80 301.6 289 61.9
Nitab4.5_0005239g0010 Nicotiana tabacum HOM05D006517 ORTHO05D007886 6.6e-80 301.6 284 62.3
Duzib187G0844 Durio zibethinus HOM05D006517 ORTHO05D007886 1.1e-79 300.8 282 57.8
MBI13_g05966_MAGBIO Magnolia biondii HOM05D006517 ORTHO05D007886 1.1e-79 300.8 287 57.5
CDE05G1274 Ceratophyllum demersum HOM05D006517 ORTHO05D007886 1.9e-79 300.1 285 54.7
arahy.Tifrunner.gnm1.ann1.2S6U7G Arachis hypogaea HOM05D006517 ORTHO05D007886 2.8e-78 296.2 264 59.5
EL10Ac8g18944 Beta vulgaris HOM05D006517 ORTHO05D007886 2.8e-78 296.2 281 53.4
VMungo1215G1783 Vigna mungo HOM05D006517 ORTHO05D007886 8.1e-78 294.7 288 66.3
Hund08920 Selenicereus undatus HOM05D006517 ORTHO05D007886 3.4e-76 289.3 283 54.8
Zm00001eb327610 Zea mays HOM05D006517 ORTHO05D007886 6.4e-75 285.0 288 53.1
AUR62025324 Chenopodium quinoa HOM05D006517 ORTHO05D007886 1.1e-74 284.3 284 51.1
SGA_v2.0_scaffold318G48507 Striga asiatica HOM05D006517 ORTHO05D007886 9.3e-74 281.2 298 49.7
ECA232G0292 Erigeron canadensis HOM05D001622 ORTHO05D002989 2.5e-71 273.1 263 55.9
Psat4g020160 Pisum sativum HOM05D006517 ORTHO05D007886 8.1e-70 268.1 239 59.0
FAN26G3113 Fragaria x ananassa HOM05D006517 ORTHO05D007886 1.8e-69 266.9 280 58.2
Oeu000950.1 Olea europaea HOM05D006517 ORTHO05D007886 2.4e-69 266.5 246 56.1
Os07g0618600 Oryza sativa ssp. japonica HOM05D006517 ORTHO05D007886 3.1e-69 266.2 290 60.3
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 4.0e-69 265.8 253 56.1
Nn8g38504 Nelumbo nucifera HOM05D006517 ORTHO05D007886 3.8e-67 259.2 284 48.9
arahy.Tifrunner.gnm1.ann1.0410DC Arachis hypogaea HOM05D006517 ORTHO05D007886 3.5e-65 252.7 243 56.4
Actinidia39602 Actinidia chinensis HOM05D006517 ORTHO05D007886 7.9e-65 251.5 239 54.4
Mapoly0086s0040 Marchantia polymorpha HOM05D006517 ORTHO05D007886 2.3e-64 250.0 288 46.5
Actinidia39601 Actinidia chinensis HOM05D006517 ORTHO05D007886 3.0e-64 249.6 235 54.5
SMO117G0175 Selaginella moellendorffii HOM05D006517 ORTHO05D007886 1.6e-62 243.8 302 50.7
SalBow6G1494 Salvia bowleyana HOM05D006517 ORTHO05D007886 6.2e-62 241.9 256 52.3
SGA_v2.0_scaffold31G12706 Striga asiatica HOM05D006517 ORTHO05D007886 2.2e-59 233.4 237 51.9
FAN23G2301 Fragaria x ananassa HOM05D006517 ORTHO05D007886 5.5e-58 228.8 280 53.6
FAN28G2617 Fragaria x ananassa HOM05D006517 ORTHO05D007886 2.7e-57 226.5 280 47.5
AUR62028338 Chenopodium quinoa HOM05D000417 ORTHO05D007886 1.8e-56 223.8 275 45.5
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 6.2e-54 215.3 234 49.1
DCAR_010521 Daucus carota HOM05D006517 ORTHO05D007886 6.5e-51 205.3 294 44.9
Aa31LG5G9580 Aethionema arabicum HOM05D006517 ORTHO05D007886 6.7e-48 195.3 208 49.5
Cpa.g.sc82.30 Carica papaya HOM05D006517 ORTHO05D007886 2.5e-47 193.4 116 79.3
Sp4g06310 Schrenkiella parvula HOM05D006517 ORTHO05D007886 5.7e-47 192.2 202 53.0
HPP92_002241 Vanilla planifolia HOM05D000872 ORTHO05D000777 2.2e-46 190.3 247 53.0
AL4G18760 Arabidopsis lyrata HOM05D006517 ORTHO05D007886 8.2e-46 188.3 203 52.2
Pp3c18_11010 Physcomitrium patens HOM05D006517 ORTHO05D007886 2.4e-45 186.8 287 46.7
Carub.0004s0605 Capsella rubella HOM05D006517 ORTHO05D007886 3.1e-45 186.4 203 51.7
CBR_g36802 Chara braunii HOM05D006517 ORTHO05D007886 4.1e-45 186.0 288 36.1
C04p55990 Brassica napus HOM05D006517 ORTHO05D007886 9.0e-45 184.9 171 57.3
BolC4t27132H Brassica oleracea HOM05D006517 ORTHO05D007886 9.0e-45 184.9 171 57.3
AT2G26210 Arabidopsis thaliana HOM05D006517 ORTHO05D007886 2.0e-44 183.7 203 50.2
Rhsim05G0081000 Rhododendron simsii HOM05D006517 ORTHO05D007886 4.5e-44 182.6 265 41.9
BraA04t17607Z Brassica rapa HOM05D006517 ORTHO05D007886 1.3e-43 181.0 171 55.6
CARHR115040 Cardamine hirsuta HOM05D006517 ORTHO05D007886 3.8e-43 179.5 202 50.5
A04p20280 Brassica napus HOM05D006517 ORTHO05D007886 1.4e-42 177.6 171 55.0
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 2.5e-39 166.8 207 43.5
Cc09_g04390 Coffea canephora HOM05D006517 ORTHO05D007886 2.5e-39 166.8 128 60.2
BcaNung07167 Brassica carinata HOM05D006517 ORTHO05D007886 4.3e-39 166.0 170 64.1
Solyc06g031680.2 Solanum lycopersicum HOM05D006517 ORTHO05D007886 5.7e-39 165.6 133 56.4
Cc09_g04380 Coffea canephora HOM05D006517 ORTHO05D007886 1.7e-38 164.1 121 66.9
Sopen06g010170 Solanum pennellii HOM05D006517 ORTHO05D007886 6.3e-38 162.2 133 55.6
AagrBONN_evm.TU.Sc2ySwM_362.2898 Anthoceros agrestis HOM05D006517 ORTHO05D007886 2.2e-35 153.7 221 39.4
Solyc06g031690.4 Solanum lycopersicum HOM05D006517 ORTHO05D007886 3.8e-35 152.9 94 77.7
FAN19G3155 Fragaria x ananassa HOM05D006517 ORTHO05D007886 5.5e-34 149.1 215 51.6
SEGI_24061 Sequoiadendron giganteum HOM05D006517 ORTHO05D007886 1.2e-33 147.9 141 51.8
Cpa.g.sc82.25 Carica papaya HOM05D006517 ORTHO05D007886 1.7e-30 137.5 67 89.6
Thhalv10002200m.g Eutrema salsugineum HOM05D006517 ORTHO05D007886 3.5e-28 129.8 202 48.0
vmacro13145 Vaccinium macrocarpon HOM05D006517 ORTHO05D007886 1.8e-21 107.5 217 35.5
Medtr5g081760 Medicago truncatula HOM05D006517 ORTHO05D007886 4.2e-18 96.3 82 59.8
Peaxi162Scf00658g00031 Petunia axillaris HOM05D000115 ORTHO05D000464 1.6e-17 94.4 75 64.0
Medtr8g098885 Medicago truncatula HOM05D006517 ORTHO05D007886 4.4e-15 86.3 50 78.0
Medtr4g036440 Medicago truncatula HOM05D006517 ORTHO05D007886 7.5e-15 85.5 75 60.0
Lsat_1_v5_gn_5_30201 Lactuca sativa HOM05D006517 ORTHO05D007886 1.6e-12 77.8 81 48.1
TWI73G0176 Tripterygium wilfordii HOM05D000088 ORTHO05D003056 2.3e-08 63.9 99 35.4
Cpa.g.sc82.29 Carica papaya HOM05D006517 ORTHO05D007886 6.8e-08 62.4 55 49.1
TWI09G1601 Tripterygium wilfordii HOM05D000088 ORTHO05D003056 1.3e-06 58.2 100 32.0


User provided reference genes

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