Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 2.4e-98 362.1 169 100.0
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 1.3e-88 329.7 167 92.8
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 1.9e-63 246.1 164 68.9
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 9.4e-63 243.8 175 65.7
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 3.6e-62 241.9 167 64.7
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 4.7e-62 241.5 167 64.7
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 6.1e-62 241.1 174 64.4
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 8.0e-62 240.7 167 66.5
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 5.2e-61 238.0 168 65.5
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 5.2e-61 238.0 167 68.3
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 6.7e-61 237.7 167 61.7
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 1.1e-60 236.9 167 65.3
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 2.6e-60 235.7 167 65.9
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 2.6e-60 235.7 164 65.2
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 4.4e-60 235.0 167 65.9
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 2.2e-59 232.6 168 62.5
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 8.2e-59 230.7 170 63.5
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 1.1e-58 230.3 165 64.2
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 1.1e-58 230.3 164 69.5
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 1.1e-58 230.3 128 76.6
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 1.1e-58 230.3 170 63.5
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 1.4e-58 229.9 168 61.9
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.4e-58 229.9 168 61.9
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 1.8e-58 229.6 171 61.4
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 1.8e-58 229.6 166 63.3
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 2.4e-58 229.2 168 62.5
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 4.1e-58 228.4 170 62.9
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 4.1e-58 228.4 168 61.9
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 4.1e-58 228.4 175 61.7
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 4.1e-58 228.4 172 62.8
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 4.1e-58 228.4 170 62.9
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 1.2e-57 226.9 165 63.0
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.6e-57 226.5 167 64.1
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 2.6e-57 225.7 128 75.0
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 3.5e-57 225.3 155 67.1
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 4.5e-57 224.9 150 67.3
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 1.3e-56 223.4 127 71.7
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 1.7e-56 223.0 155 67.1
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 2.9e-56 222.2 154 66.9
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 8.5e-56 220.7 131 70.2
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 1.1e-55 220.3 131 71.8
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 1.1e-55 220.3 165 61.2
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 1.5e-55 219.9 163 63.2
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 2.5e-55 219.2 176 58.0
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 3.2e-55 218.8 126 74.6
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 7.2e-55 217.6 155 62.6
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 1.2e-54 216.9 170 60.6
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.2e-54 216.9 172 59.9
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 1.6e-54 216.5 163 63.8
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 1.6e-54 216.5 174 60.9
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 2.1e-54 216.1 167 59.9
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 2.1e-54 216.1 156 65.4
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 2.1e-54 216.1 167 57.5
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 2.7e-54 215.7 177 59.3
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 2.7e-54 215.7 174 60.3
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 2.7e-54 215.7 177 59.3
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 2.7e-54 215.7 174 58.0
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 2.7e-54 215.7 153 64.7
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 3.6e-54 215.3 167 56.9
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 4.7e-54 214.9 126 73.0
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 4.7e-54 214.9 173 60.7
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 4.7e-54 214.9 177 59.3
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 6.1e-54 214.5 173 60.1
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 6.1e-54 214.5 162 62.3
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 8.0e-54 214.2 130 70.0
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 1.8e-53 213.0 163 60.1
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 3.0e-53 212.2 126 72.2
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 3.0e-53 212.2 175 60.0
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 3.0e-53 212.2 136 68.4
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 4.0e-53 211.8 154 59.1
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 1.5e-52 209.9 116 74.1
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 3.3e-52 208.8 151 60.9
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 5.7e-52 208.0 151 60.9
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 1.3e-51 206.8 166 60.2
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 3.7e-51 205.3 165 60.6
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 2.4e-50 202.6 165 57.6
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 1.2e-46 190.3 159 53.5
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 2.1e-46 189.5 133 62.4
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 2.0e-44 183.0 150 54.7
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 6.3e-43 177.9 147 54.4
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 1.4e-42 176.8 145 57.9
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 5.4e-42 174.9 122 61.5
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 2.0e-41 172.9 126 60.3
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 1.7e-40 169.9 185 49.7
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 3.8e-40 168.7 121 57.0
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 7.2e-39 164.5 156 52.6
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 9.5e-39 164.1 123 56.9
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 8.0e-38 161.0 167 50.3
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 3.0e-37 159.1 156 51.3
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 4.0e-37 158.7 87 78.2
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 1.5e-36 156.8 115 53.9
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 3.4e-36 155.6 138 55.1
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 1.3e-35 153.7 167 49.1
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 1.2e-33 147.1 131 53.4
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 9.5e-31 137.5 168 42.3
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 8.0e-30 134.4 111 55.9
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 4.4e-20 102.1 86 62.8
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 2.4e-18 96.3 56 71.4
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 1.1e-15 87.4 80 51.2
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 7.3e-15 84.7 171 30.4
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 2.1e-14 83.2 47 74.5


User provided reference genes

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