Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 6.0e-109 397.5 199 100.0
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 1.1e-97 360.1 199 91.5
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 2.5e-67 259.2 193 71.0
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 9.7e-67 257.3 184 74.5
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 1.7e-63 246.5 200 65.0
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 7.2e-62 241.1 199 67.3
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 9.4e-62 240.7 200 67.0
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 2.1e-61 239.6 199 66.8
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 3.6e-61 238.8 199 66.3
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 1.8e-60 236.5 208 63.0
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 1.8e-60 236.5 171 69.6
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 8.8e-60 234.2 143 79.0
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 1.5e-59 233.4 140 80.7
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 2.6e-59 232.6 197 66.0
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 2.8e-58 229.2 144 77.8
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 6.3e-58 228.0 200 63.0
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 6.3e-58 228.0 176 67.6
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 6.3e-58 228.0 199 64.8
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 8.2e-58 227.6 202 63.9
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 1.4e-57 226.9 182 66.5
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 1.4e-57 226.9 200 61.0
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 1.8e-57 226.5 174 66.7
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 1.8e-57 226.5 174 66.7
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 1.8e-57 226.5 156 73.7
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 3.1e-57 225.7 150 74.7
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 6.9e-57 224.6 161 72.0
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 1.2e-56 223.8 178 66.3
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 3.4e-56 222.2 174 66.7
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 1.3e-55 220.3 203 61.1
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 5.0e-55 218.4 178 65.2
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 8.5e-55 217.6 145 75.2
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 2.5e-54 216.1 147 71.4
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 1.6e-53 213.4 173 64.2
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 2.1e-53 213.0 200 62.0
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 4.7e-53 211.8 173 62.4
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 6.1e-53 211.5 141 74.5
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 6.1e-53 211.5 199 58.8
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 1.0e-52 210.7 180 62.2
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 3.0e-52 209.1 140 74.3
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 5.2e-52 208.4 182 59.3
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 6.7e-52 208.0 179 62.0
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 6.7e-52 208.0 197 58.4
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 6.7e-52 208.0 187 59.9
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 8.8e-52 207.6 208 56.7
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 2.6e-51 206.1 180 61.1
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 2.6e-51 206.1 165 64.2
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 3.3e-51 205.7 175 62.3
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 3.3e-51 205.7 177 61.0
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 5.7e-51 204.9 196 60.2
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 7.4e-51 204.5 191 59.2
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 1.8e-49 199.9 195 57.9
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 1.8e-49 199.9 114 83.3
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 2.4e-49 199.5 197 57.4
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 3.1e-49 199.1 140 70.0
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 3.1e-49 199.1 163 62.0
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 5.3e-49 198.4 164 62.2
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 9.1e-49 197.6 197 56.3
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 2.0e-48 196.4 176 59.1
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 7.7e-48 194.5 194 56.2
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 1.0e-47 194.1 147 68.7
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 1.3e-47 193.7 171 63.2
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 5.0e-47 191.8 114 82.5
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 8.5e-47 191.0 157 65.6
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 1.1e-46 190.7 197 55.8
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 1.9e-46 189.9 152 66.4
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 2.3e-44 183.0 148 65.5
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 6.7e-44 181.4 140 67.9
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 8.8e-44 181.0 175 55.4
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.3e-43 179.1 159 62.9
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 4.4e-43 178.7 140 66.4
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 4.4e-43 178.7 122 71.3
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 7.5e-43 177.9 140 65.0
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 2.8e-42 176.0 125 70.4
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 4.8e-42 175.3 142 65.5
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 6.3e-42 174.9 125 69.6
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 6.3e-42 174.9 123 69.9
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 6.3e-42 174.9 125 69.6
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 6.3e-42 174.9 123 69.9
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 1.8e-41 173.3 125 68.8
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 2.4e-41 172.9 184 56.0
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.1e-41 172.6 121 73.6
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 5.3e-41 171.8 123 69.1
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 5.3e-41 171.8 178 52.8
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 9.1e-41 171.0 192 52.6
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 7.7e-40 167.9 202 53.5
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 1.0e-39 167.5 182 54.4
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 1.0e-39 167.5 182 54.4
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 2.2e-39 166.4 147 59.9
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 2.5e-38 162.9 139 64.0
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 4.2e-38 162.2 200 52.5
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 4.7e-37 158.7 127 64.6
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 5.4e-33 145.2 204 45.6
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 7.0e-33 144.8 129 55.0
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 3.8e-31 139.0 122 58.2
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 5.0e-31 138.7 144 50.0
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 2.5e-30 136.3 127 54.3
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 1.6e-29 133.7 389 30.3
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 8.8e-28 127.9 82 73.2
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 2.0e-27 126.7 82 73.2
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 3.1e-25 119.4 84 67.9
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 9.2e-25 117.9 84 66.7
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 1.8e-17 93.6 80 57.5
Ciclev10013843m.g Citrus clementina HOM05D007282 ORTHO05D009214 5.8e-11 72.0 103 45.6
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 1.3e-10 70.9 49 71.4
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 7.0e-09 65.1 52 65.4
PRCOL_00001877 Prasinoderma coloniale HOM05D007282 ORTHO05D009214 6.6e-07 58.5 126 32.5
MD12G1029500 Malus domestica HOM05D007282 ORTHO05D009214 8.6e-07 58.2 92 46.7
MD14G1029800 Malus domestica HOM05D007282 ORTHO05D009214 2.5e-06 56.6 93 45.2


User provided reference genes

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