Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G205800 Populus trichocarpa HOM05D008222 ORTHO05D010364 0.0e+00 1243.0 694 100.0
Sabra06G0158800 Salix brachista HOM05D008222 ORTHO05D010364 0.0e+00 1124.8 694 91.9
Manes.09G049300 Manihot esculenta HOM05D008222 ORTHO05D010364 1.5e-175 620.5 695 55.5
Haze_19673 Corylus avellana HOM05D008222 ORTHO05D010364 2.2e-158 563.5 699 51.4
Cfa016663 Carpinus fangiana HOM05D008222 ORTHO05D010364 2.3e-155 553.5 700 51.9
Dinv31739 Davidia involucrata HOM05D008222 ORTHO05D010364 5.1e-155 552.4 706 55.2
QL07p037571 Quercus lobata HOM05D008222 ORTHO05D010364 5.1e-147 525.8 705 53.3
Ciclev10011213m.g Citrus clementina HOM05D008222 ORTHO05D010364 6.9e-144 515.4 699 50.6
COL.COLO4_29620 Corchorus olitorius HOM05D008222 ORTHO05D010364 3.0e-139 500.0 699 53.4
TAR633G2678 Trochodendron aralioides HOM05D008222 ORTHO05D010364 9.9e-135 485.0 711 49.4
Atru.chr8.1411 Acer truncatum HOM05D008222 ORTHO05D010364 2.2e-134 483.8 748 42.6
Thecc.05G099900 Theobroma cacao HOM05D008222 ORTHO05D010364 3.8e-134 483.0 698 46.1
CiPaw.10G014900 Carya illinoinensis HOM05D008222 ORTHO05D010364 3.1e-128 463.4 704 48.9
Cpa.g.sc104.69 Carica papaya HOM05D008222 ORTHO05D010364 1.3e-126 458.0 708 46.8
TAR636G2750 Trochodendron aralioides HOM05D008222 ORTHO05D010364 3.2e-125 453.4 708 47.0
CSS0016714 Camellia sinensis var. sinensis HOM05D008222 ORTHO05D010364 7.1e-125 452.2 725 48.0
TWI77G0950 Tripterygium wilfordii HOM05D008222 ORTHO05D010364 1.8e-123 447.6 712 45.9
GSVIVG01033924001 Vitis vinifera HOM05D008222 ORTHO05D010364 2.2e-121 440.7 699 44.6
Nn6g34773 Nelumbo nucifera HOM05D008222 ORTHO05D010364 3.0e-115 420.2 708 46.9
Lj1C1035T2 Lonicera japonica HOM05D008222 ORTHO05D010364 4.5e-103 379.8 697 40.3
Glyma.02G200000 Glycine max HOM05D008222 ORTHO05D010364 5.3e-96 356.3 701 40.1
Glyma.10G076700 Glycine max HOM05D008222 ORTHO05D010364 4.5e-95 353.2 701 44.5
Oeu010753.1 Olea europaea HOM05D008222 ORTHO05D010364 2.7e-92 344.0 694 34.6
RcHm_v2.0_Chr3g0475181 Rosa chinensis HOM05D008222 ORTHO05D010364 1.8e-91 341.3 696 41.7
FvH4_6g19810 Fragaria vesca HOM05D008222 ORTHO05D010364 2.2e-89 334.3 696 41.5
FAN14G0765 Fragaria x ananassa HOM05D008222 ORTHO05D010364 3.1e-88 330.5 695 41.2
FAN05G0526 Fragaria x ananassa HOM05D008222 ORTHO05D010364 7.0e-88 329.3 696 41.4
MBI17_g16777_MAGBIO Magnolia biondii HOM05D008222 ORTHO05D010364 2.7e-87 327.4 713 41.0
CANSAT64G2035 Cannabis sativa HOM05D008222 ORTHO05D010364 3.5e-87 327.0 766 35.9
CiPaw.09G018200 Carya illinoinensis HOM05D008222 ORTHO05D010364 1.0e-86 325.5 580 42.2
MD12G1033800 Malus domestica HOM05D008222 ORTHO05D010364 1.0e-86 325.5 601 40.6
Oeu010756.1 Olea europaea HOM05D008222 ORTHO05D010364 2.2e-86 324.3 694 33.1
DCAR_020725 Daucus carota HOM05D008222 ORTHO05D010364 2.9e-86 323.9 706 35.4
FAN05G0780 Fragaria x ananassa HOM05D008222 ORTHO05D010364 5.0e-86 323.2 696 41.7
FAN02G2041 Fragaria x ananassa HOM05D008222 ORTHO05D010364 7.2e-85 319.3 699 41.2
Lj5g0010690 Lotus japonicus HOM05D008222 ORTHO05D010364 1.6e-84 318.2 706 40.1
FAN09G4126 Fragaria x ananassa HOM05D008222 ORTHO05D010364 6.8e-83 312.8 696 41.7
Phvul.007G270200 Phaseolus vulgaris HOM05D008222 ORTHO05D010364 6.8e-83 312.8 703 38.8
Oeu060355.1 Olea europaea HOM05D008222 ORTHO05D010364 1.7e-81 308.1 696 35.5
VMungo0720G0042 Vigna mungo HOM05D008222 ORTHO05D010364 7.0e-80 302.8 702 38.9
MSTRG.10386 Avicennia marina HOM05D008222 ORTHO05D010364 9.5e-77 292.4 700 32.9
TPR.G8743 Trifolium pratense HOM05D008222 ORTHO05D010364 5.7e-74 283.1 708 35.6
Medtr1g058110 Medicago truncatula HOM05D008222 ORTHO05D010364 1.1e-72 278.9 700 41.0
AUR62006264 Chenopodium quinoa HOM05D008222 ORTHO05D010364 1.0e-70 272.3 729 31.8
Sc20g0006580 Simmondsia chinensis HOM05D008222 ORTHO05D010364 2.9e-70 270.8 699 39.2
Hund03869 Selenicereus undatus HOM05D008222 ORTHO05D010364 2.1e-68 264.6 789 32.8
AUR62028514 Chenopodium quinoa HOM05D008222 ORTHO05D010364 8.0e-68 262.7 822 35.3
EL10Ac7g16820 Beta vulgaris HOM05D008222 ORTHO05D010364 3.1e-67 260.8 808 33.9
Aqoxy4G02694 Aquilegia oxysepala HOM05D008222 ORTHO05D010364 8.6e-62 242.7 729 35.5
HPP92_009786 Vanilla planifolia HOM05D008222 ORTHO05D010364 6.4e-57 226.5 722 37.3
ATR0772G019 Amborella trichopoda HOM05D008222 ORTHO05D010364 8.1e-52 209.5 719 34.2
Oeu010754.1 Olea europaea HOM05D008222 ORTHO05D010364 5.8e-50 203.4 524 29.6
SGA_v2.0_scaffold184G40000 Striga asiatica HOM05D008222 ORTHO05D010364 8.3e-49 199.5 697 29.0
CDE06G1815 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 4.7e-44 183.7 696 32.8
SEGI_05246 Sequoiadendron giganteum HOM05D008222 ORTHO05D010364 2.0e-42 178.3 796 33.3
CDE08G0440 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 7.6e-42 176.4 695 35.3
Os02g0536400 Oryza sativa ssp. japonica HOM05D008222 ORTHO05D010364 3.6e-36 157.5 718 30.5
ECA233G4923 Erigeron canadensis HOM05D008222 ORTHO05D010364 3.1e-35 154.5 334 33.2
unitig_8.g3557 Utricularia gibba HOM05D008222 ORTHO05D010364 9.0e-27 126.3 211 36.5
Sabra16G0076100 Salix brachista HOM05D008222 ORTHO05D010364 7.4e-21 106.7 169 44.4
Lalb_Chr02g0154681 Lupinus albus HOM05D008222 ORTHO05D010364 3.7e-20 104.4 175 43.4
AagrBONN_evm.TU.Sc2ySwM_368.1895 Anthoceros agrestis HOM05D008222 ORTHO05D010364 3.1e-11 74.7 135 38.5
Psat6g082000 Pisum sativum HOM05D008222 ORTHO05D010364 7.1e-08 63.5 41 70.7


User provided reference genes

Program Settings