Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G203800 Populus trichocarpa HOM05D009231 ORTHO05D010800 1.3e-134 483.0 234 100.0
Sabra06G0157100 Salix brachista HOM05D009231 ORTHO05D010800 1.7e-78 296.6 252 64.3
Manes.08G032900 Manihot esculenta HOM05D009231 ORTHO05D010800 1.6e-36 157.1 246 45.1
Manes.09G044800 Manihot esculenta HOM05D009231 ORTHO05D010800 7.9e-36 154.8 245 42.0
Duzib093G0513 Durio zibethinus HOM05D009231 ORTHO05D010800 4.4e-34 149.1 239 42.7
Thecc.05G103300 Theobroma cacao HOM05D009231 ORTHO05D010800 5.3e-32 142.1 248 42.7
Cpa.g.sc104.38 Carica papaya HOM05D009231 ORTHO05D010800 1.4e-27 127.5 268 39.9
Gohir.A01G201800 Gossypium hirsutum HOM05D009231 ORTHO05D010800 4.0e-27 125.9 240 41.7
Gorai.002G235600 Gossypium raimondii HOM05D009231 ORTHO05D010800 4.8e-25 119.0 236 41.5
COL.COLO4_29583 Corchorus olitorius HOM05D009231 ORTHO05D010800 1.4e-24 117.5 160 46.2
Actinidia03894 Actinidia chinensis HOM05D009231 ORTHO05D010800 5.0e-22 109.0 234 36.3
Haze_07057 Corylus avellana HOM05D009231 ORTHO05D010800 7.2e-21 105.1 251 37.1
Prupe.7G095600 Prunus persica HOM05D015804 ORTHO05D010800 9.4e-21 104.8 235 37.4
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 2.7e-20 103.2 246 35.4
QL07p036848 Quercus lobata HOM05D009231 ORTHO05D010800 2.7e-20 103.2 251 37.8
Cfa021528 Carpinus fangiana HOM05D009231 ORTHO05D010800 4.7e-20 102.4 241 36.1
Actinidia32045 Actinidia chinensis HOM05D009231 ORTHO05D010800 6.8e-19 98.6 243 36.6
Hma1.2p1_0079F.1_g041880 Hydrangea macrophylla HOM05D009231 ORTHO05D010800 8.8e-19 98.2 265 34.3
RcHm_v2.0_Chr3g0475841 Rosa chinensis HOM05D015804 ORTHO05D010800 2.0e-18 97.1 234 35.0
Gohir.D01G191700 Gossypium hirsutum HOM05D009231 ORTHO05D010800 1.4e-16 90.9 191 39.3
TAR636G0160 Trochodendron aralioides HOM05D009231 ORTHO05D010800 9.1e-16 88.2 248 35.1
MD12G1039600 Malus domestica HOM05D015804 ORTHO05D010800 1.2e-12 77.8 175 32.6
TAR633G1440 Trochodendron aralioides HOM05D009231 ORTHO05D010800 6.1e-12 75.5 112 46.4
FvH4_6g20250 Fragaria vesca HOM05D015804 ORTHO05D010800 8.0e-12 75.1 231 31.6
Sp4g18200 Schrenkiella parvula HOM05D020906 ORTHO05D021169 4.0e-11 72.8 233 30.0
FAN14G2856 Fragaria x ananassa HOM05D015804 ORTHO05D010800 5.2e-11 72.4 238 30.3
GSVIVG01033951001 Vitis vinifera HOM05D009231 ORTHO05D010800 5.7e-10 68.9 269 29.4
FAN05G3991 Fragaria x ananassa HOM05D015804 ORTHO05D010800 4.1e-08 62.8 121 35.5
Nn6g34706 Nelumbo nucifera HOM05D009231 ORTHO05D010800 7.0e-08 62.0 207 30.4
AT2G35950 Arabidopsis thaliana HOM05D020906 ORTHO05D021169 9.2e-08 61.6 244 28.3
AL4G32060 Arabidopsis lyrata HOM05D020906 ORTHO05D021169 2.0e-07 60.5 154 31.2
FAN05G1852 Fragaria x ananassa HOM05D015804 ORTHO05D010800 4.5e-07 59.3 239 28.0
CARHR130210 Cardamine hirsuta HOM05D020906 ORTHO05D021169 1.0e-06 58.2 136 30.9
FAN02G3496 Fragaria x ananassa HOM05D015804 ORTHO05D010800 1.0e-06 58.2 247 27.9
FAN09G0232 Fragaria x ananassa HOM05D015804 ORTHO05D010800 2.9e-06 56.6 236 27.5


User provided reference genes

Program Settings