Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 5.3e-309 1063.5 539 100.0
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 2.6e-255 885.2 549 85.4
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 9.4e-250 866.7 547 82.8
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 1.3e-214 750.0 548 74.8
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 5.4e-197 691.4 549 70.5
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 3.5e-196 688.7 549 70.5
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 1.3e-195 686.8 549 69.6
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 4.3e-194 681.8 573 66.7
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 2.5e-186 656.0 559 66.7
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 4.8e-185 651.7 542 66.6
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 6.2e-185 651.4 548 67.7
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 5.3e-184 648.3 530 66.6
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 2.0e-183 646.4 565 65.5
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 2.3e-179 632.9 489 70.3
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 5.1e-179 631.7 554 65.7
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 8.7e-179 630.9 542 66.6
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 1.5e-178 630.2 489 70.1
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 1.9e-178 629.8 553 64.6
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 2.5e-178 629.4 514 69.3
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 7.4e-178 627.9 489 69.9
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 3.4e-175 619.0 552 64.1
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 6.5e-174 614.8 553 63.8
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 8.4e-174 614.4 555 64.3
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 1.9e-173 613.2 553 64.4
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 1.2e-172 610.5 544 63.4
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 5.1e-171 605.1 556 62.9
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 4.3e-170 602.1 555 63.8
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 1.5e-167 593.6 556 61.3
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 5.9e-167 591.7 573 60.6
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 1.3e-166 590.5 557 61.4
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 1.2e-164 583.9 519 64.0
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 1.4e-163 580.5 519 64.4
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 1.8e-163 580.1 544 60.8
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 4.3e-162 575.5 521 62.6
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 3.7e-161 572.4 519 62.4
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 6.3e-161 571.6 562 60.0
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 7.7e-159 564.7 511 62.4
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 1.3e-158 563.9 545 60.4
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 1.7e-158 563.5 518 61.6
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 1.9e-157 560.1 546 60.3
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 5.5e-157 558.5 521 61.4
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 1.3e-153 547.4 516 62.0
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 4.8e-153 545.4 553 57.5
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 6.3e-153 545.0 520 61.0
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 3.1e-152 542.7 518 60.6
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 1.2e-151 540.8 523 60.0
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 5.9e-151 538.5 528 59.1
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 5.0e-150 535.4 515 61.4
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 5.0e-150 535.4 547 58.5
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 8.0e-148 528.1 545 57.8
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 8.0e-148 528.1 564 57.1
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 3.9e-147 525.8 554 58.7
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 1.5e-146 523.9 541 57.1
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 4.8e-145 518.8 588 55.6
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 4.8e-145 518.8 588 55.6
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 1.1e-144 517.7 516 59.5
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 2.0e-143 513.5 532 57.9
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 1.7e-142 510.4 505 59.0
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 2.5e-141 506.5 526 57.0
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 4.2e-141 505.8 514 58.8
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 7.2e-141 505.0 635 51.0
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 7.2e-141 505.0 529 56.5
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 5.2e-139 498.8 517 57.3
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 5.9e-135 485.3 495 56.6
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 2.2e-134 483.4 501 57.5
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 5.0e-134 482.3 529 55.4
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 8.5e-134 481.5 530 55.3
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 2.0e-130 470.3 498 55.6
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 7.5e-130 468.4 487 56.9
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 3.1e-128 463.0 528 54.4
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.2e-127 461.1 561 50.8
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 1.9e-125 453.8 538 53.3
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 6.1e-124 448.7 538 52.2
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 1.4e-123 447.6 493 54.8
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 1.4e-123 447.6 508 53.1
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 3.2e-120 436.4 563 49.2
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 4.1e-120 436.0 523 51.1
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 5.9e-119 432.2 423 60.5
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 7.8e-119 431.8 501 52.9
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 2.3e-118 430.3 399 62.4
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 2.5e-117 426.8 469 53.7
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 2.5e-117 426.8 438 56.4
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 7.5e-114 415.2 457 56.0
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 1.0e-110 404.8 495 53.3
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 2.3e-110 403.7 501 50.7
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 1.5e-106 391.0 486 50.4
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 1.7e-105 387.5 495 48.3
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 2.9e-105 386.7 521 47.2
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 1.4e-104 384.4 349 63.0
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 2.7e-103 380.2 488 50.6
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 3.3e-101 373.2 497 51.3
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 6.8e-99 365.5 483 50.9
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 2.3e-94 350.5 530 44.9
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 3.4e-90 336.7 536 44.4
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 1.9e-88 330.9 549 41.3
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 9.6e-85 318.5 331 58.0
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 1.1e-80 305.1 529 40.8
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 5.4e-80 302.8 307 56.7
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 2.0e-74 284.3 547 39.7
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 7.6e-74 282.3 551 39.4
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 3.8e-73 280.0 552 37.9
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 7.1e-72 275.8 533 38.3
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 3.5e-71 273.5 293 54.3
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 5.8e-66 256.1 504 35.3
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 3.8e-65 253.4 226 61.5
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 4.6e-63 246.5 222 62.6
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 1.3e-54 218.4 523 32.3
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 5.1e-54 216.5 366 43.4
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 5.5e-40 169.9 379 36.1
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 7.4e-37 159.5 152 59.2
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 1.8e-35 154.8 598 28.1
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 1.8e-30 138.3 516 27.7
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 3.6e-23 114.0 89 69.7
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 3.4e-21 107.5 127 54.3
Peaxi162Scf00370g00114 Petunia axillaris HOM05D006568 ORTHO05D008342 2.7e-15 87.8 166 41.0
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 1.7e-09 68.6 53 60.4
Medtr8g014610 Medicago truncatula HOM05D006568 ORTHO05D258972 3.6e-07 60.8 103 40.8


User provided reference genes

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