Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G188200 Populus trichocarpa HOM05D006152 ORTHO05D008137 2.9e-102 375.2 183 100.0
Sabra06G0143900 Salix brachista HOM05D006152 ORTHO05D008137 1.6e-84 316.2 217 74.2
Sabra06G0145100 Salix brachista HOM05D006152 ORTHO05D008137 1.6e-84 316.2 217 74.2
QL02p092448 Quercus lobata HOM05D006152 ORTHO05D008137 2.3e-78 295.8 182 78.6
Manes.06G038100 Manihot esculenta HOM05D006152 ORTHO05D008137 1.1e-77 293.5 183 76.5
TWI32G1323 Tripterygium wilfordii HOM05D006152 ORTHO05D008137 4.3e-77 291.6 183 76.5
CSS0018805 Camellia sinensis var. sinensis HOM05D006152 ORTHO05D008137 7.3e-77 290.8 182 76.9
Haze_19246 Corylus avellana HOM05D006152 ORTHO05D008137 7.3e-77 290.8 184 77.7
QL02p092408 Quercus lobata HOM05D006152 ORTHO05D008137 2.1e-76 289.3 183 77.6
CiPaw.16G115700 Carya illinoinensis HOM05D006152 ORTHO05D008137 8.9e-75 283.9 183 77.0
Ciclev10008799m.g Citrus clementina HOM05D006152 ORTHO05D008137 3.4e-74 282.0 179 74.9
Actinidia38346 Actinidia chinensis HOM05D006152 ORTHO05D008137 5.8e-74 281.2 181 74.0
Rhsim01G0042700 Rhododendron simsii HOM05D006152 ORTHO05D008137 1.3e-73 280.0 180 73.9
RcHm_v2.0_Chr2g0086151 Rosa chinensis HOM05D006152 ORTHO05D008137 1.7e-73 279.6 183 74.9
CSS0025720 Camellia sinensis var. sinensis HOM05D006152 ORTHO05D008137 6.4e-73 277.7 207 67.1
COL.COLO4_18762 Corchorus olitorius HOM05D006152 ORTHO05D008137 1.4e-72 276.6 179 73.2
Thecc.09G035000 Theobroma cacao HOM05D006152 ORTHO05D008137 2.4e-72 275.8 179 73.7
FvH4_1g01320 Fragaria vesca HOM05D006152 ORTHO05D008137 5.4e-72 274.6 183 73.2
vmacro13046 Vaccinium macrocarpon HOM05D006152 ORTHO05D008137 1.6e-71 273.1 181 71.3
vmacro23231 Vaccinium macrocarpon HOM05D006152 ORTHO05D008137 1.6e-71 273.1 181 71.3
Duzib168G0440 Durio zibethinus HOM05D006152 ORTHO05D008137 2.0e-71 272.7 179 75.4
FAN23G2003 Fragaria x ananassa HOM05D006152 ORTHO05D008137 3.5e-71 271.9 183 72.7
Gohir.D05G052200 Gossypium hirsutum HOM05D006152 ORTHO05D008137 2.3e-70 269.2 179 73.7
Rhsim01G0046600 Rhododendron simsii HOM05D006152 ORTHO05D008137 2.3e-70 269.2 198 67.2
Gohir.A05G050600 Gossypium hirsutum HOM05D006152 ORTHO05D008137 3.9e-70 268.5 179 73.2
Nn2g12295 Nelumbo nucifera HOM05D006152 ORTHO05D008137 1.1e-69 266.9 179 72.6
Hma1.2p1_0222F.1_g093210 Hydrangea macrophylla HOM05D006152 ORTHO05D008137 7.3e-69 264.2 178 72.5
MBI15_g30906_MAGBIO Magnolia biondii HOM05D006152 ORTHO05D008137 7.3e-69 264.2 178 68.5
Glyma.13G155700 Glycine max HOM05D006152 ORTHO05D008137 8.0e-68 260.8 180 72.2
Prupe.7G259100 Prunus persica HOM05D006152 ORTHO05D008137 5.2e-67 258.1 183 69.9
Aqoxy1G03917 Aquilegia oxysepala HOM05D006152 ORTHO05D008137 8.9e-67 257.3 179 68.2
Gorai.009G054000 Gossypium raimondii HOM05D006152 ORTHO05D008137 1.2e-66 256.9 190 68.4
Oeu043492.1 Olea europaea HOM05D006152 ORTHO05D008137 3.4e-66 255.4 177 68.9
MD15G1156000 Malus domestica HOM05D006152 ORTHO05D008137 4.4e-66 255.0 183 71.0
TPR.G6509 Trifolium pratense HOM05D006152 ORTHO05D008137 5.8e-66 254.6 183 68.3
Lj7A453G70 Lonicera japonica HOM05D006152 ORTHO05D008137 7.5e-66 254.2 183 66.1
MD02G1011000 Malus domestica HOM05D006152 ORTHO05D008137 7.5e-66 254.2 183 69.4
Cc06_g15390 Coffea canephora HOM05D006152 ORTHO05D008137 9.8e-66 253.8 180 66.7
Lalb_Chr12g0198561 Lupinus albus HOM05D006152 ORTHO05D008137 2.9e-65 252.3 181 71.3
DCAR_019366 Daucus carota HOM05D006152 ORTHO05D008137 4.1e-64 248.4 181 68.0
MSTRG.26302 Avicennia marina HOM05D006152 ORTHO05D008137 3.5e-63 245.4 180 65.6
VMungo1215G1041 Vigna mungo HOM05D006152 ORTHO05D008137 5.0e-62 241.5 180 66.7
Eucgr.C00382 Eucalyptus grandis HOM05D006152 ORTHO05D008137 6.6e-62 241.1 177 67.2
Lj4g0021784 Lotus japonicus HOM05D006152 ORTHO05D008137 1.5e-61 240.0 184 65.2
TPR.G37046 Trifolium pratense HOM05D006152 ORTHO05D008137 2.5e-61 239.2 184 66.3
PGSC0003DMG400003198 Solanum tuberosum HOM05D006152 ORTHO05D008137 5.6e-61 238.0 180 65.6
Phvul.003G158400 Phaseolus vulgaris HOM05D006152 ORTHO05D008137 7.3e-61 237.7 180 65.6
PSO384G3563 Papaver somniferum HOM05D006152 ORTHO05D008137 2.1e-60 236.1 184 66.3
PSO384G4708 Papaver somniferum HOM05D006152 ORTHO05D008137 2.1e-60 236.1 184 66.3
Psat4g007440 Pisum sativum HOM05D006152 ORTHO05D008137 2.1e-60 236.1 178 67.4
arahy.Tifrunner.gnm1.ann1.L77CZK Arachis hypogaea HOM05D006152 ORTHO05D008137 3.6e-60 235.3 182 64.8
arahy.Tifrunner.gnm1.ann1.QAR9AW Arachis hypogaea HOM05D006152 ORTHO05D008137 3.6e-60 235.3 182 64.8
Solyc07g005120.3 Solanum lycopersicum HOM05D006152 ORTHO05D008137 6.2e-60 234.6 180 63.3
Sopen07g001260 Solanum pennellii HOM05D006152 ORTHO05D008137 8.1e-60 234.2 180 63.9
Migut.K00351 Erythranthe guttata HOM05D006152 ORTHO05D008137 1.4e-59 233.4 181 61.3
Nitab4.5_0003856g0050 Nicotiana tabacum HOM05D006152 ORTHO05D008137 2.3e-59 232.6 180 63.9
SGA_v2.0_scaffold387G50519 Striga asiatica HOM05D006152 ORTHO05D008137 3.1e-59 232.3 180 63.3
CsaV3_2G003440 Cucumis sativus L. HOM05D006152 ORTHO05D008137 4.0e-59 231.9 182 63.2
PSO339G6042 Papaver somniferum HOM05D006152 ORTHO05D008137 4.0e-59 231.9 181 65.7
HanXRQChr10g0314551 Helianthus annuus HOM05D006152 ORTHO05D008137 8.9e-59 230.7 178 64.6
Peaxi162Scf00347g00517 Petunia axillaris HOM05D006152 ORTHO05D008137 8.9e-59 230.7 187 63.1
Medtr4g131670 Medicago truncatula HOM05D006152 ORTHO05D008137 1.5e-58 229.9 180 63.9
CAN.G520.14 Capsicum annuum HOM05D006152 ORTHO05D008137 2.0e-58 229.6 188 61.7
ClCG11G003570 Citrullus lanatus HOM05D006152 ORTHO05D008137 2.0e-58 229.6 182 63.7
MELO3C004453.2 Cucumis melo HOM05D006152 ORTHO05D008137 2.6e-58 229.2 182 62.6
Sed0008154 Sechium edule HOM05D006152 ORTHO05D008137 3.4e-58 228.8 180 65.0
ATR0184G013 Amborella trichopoda HOM05D006152 ORTHO05D008137 6.4e-57 224.6 180 58.9
Ca_21103_v3 Cicer arietinum L. HOM05D006152 ORTHO05D008137 6.4e-57 224.6 223 54.7
Sc14g0000030 Simmondsia chinensis HOM05D006152 ORTHO05D008137 6.4e-57 224.6 178 62.9
PGR142G2956 Punica granatum HOM05D006152 ORTHO05D008137 1.9e-56 223.0 178 59.0
CDE05G0292 Ceratophyllum demersum HOM05D006152 ORTHO05D008137 2.4e-56 222.6 182 58.8
Cpa.g.sc46.115 Carica papaya HOM05D006152 ORTHO05D008137 2.7e-55 219.2 180 62.8
Hma1.2p1_0222F.1_g093200 Hydrangea macrophylla HOM05D006152 ORTHO05D008137 1.1e-53 213.8 130 77.7
Hund21620 Selenicereus undatus HOM05D006152 ORTHO05D008137 1.1e-53 213.8 181 59.7
Lsat_1_v5_gn_5_90820 Lactuca sativa HOM05D006152 ORTHO05D008137 1.5e-53 213.4 186 59.7
unitig_899.g15450 Utricularia gibba HOM05D006152 ORTHO05D003911 1.9e-53 213.0 180 61.1
EL10Ac8g18846 Beta vulgaris HOM05D006152 ORTHO05D008137 1.6e-52 209.9 178 60.7
Os06g0182400 Oryza sativa ssp. japonica HOM05D006152 ORTHO05D008137 8.1e-52 207.6 184 56.0
Thhalv10014084m.g Eutrema salsugineum HOM05D006152 ORTHO05D008137 3.1e-51 205.7 182 58.8
Sp6g19860 Schrenkiella parvula HOM05D006152 ORTHO05D008137 5.2e-51 204.9 181 57.5
THA.LOC104811841 Tarenaya hassleriana HOM05D006152 ORTHO05D008137 8.9e-51 204.1 183 59.0
FAN28G1911 Fragaria x ananassa HOM05D006152 ORTHO05D008137 1.2e-50 203.8 144 68.8
Carub.0008s1874 Capsella rubella HOM05D006152 ORTHO05D008137 5.8e-50 201.4 184 58.2
AL8G34300 Arabidopsis lyrata HOM05D006152 ORTHO05D008137 7.6e-50 201.1 180 58.9
SalBow1G4451 Salvia bowleyana HOM05D001472 ORTHO05D002655 7.6e-50 201.1 179 56.4
CARHR272000 Cardamine hirsuta HOM05D006152 ORTHO05D008137 1.7e-49 199.9 180 58.3
A02p07870 Brassica napus HOM05D006152 ORTHO05D008137 6.4e-49 198.0 180 57.8
BraA02t05860Z Brassica rapa HOM05D006152 ORTHO05D008137 6.4e-49 198.0 180 57.8
BcaC03g14112 Brassica carinata HOM05D006152 ORTHO05D008137 8.4e-49 197.6 182 57.1
AT5G58200 Arabidopsis thaliana HOM05D006152 ORTHO05D008137 1.4e-48 196.8 180 57.8
BcaB05g22408 Brassica carinata HOM05D006152 ORTHO05D008137 1.9e-48 196.4 182 55.5
AUR62017200 Chenopodium quinoa HOM05D006152 ORTHO05D008137 1.9e-48 196.4 178 55.1
C02p13510 Brassica napus HOM05D006152 ORTHO05D008137 5.4e-48 194.9 182 56.6
BolC2t07463H Brassica oleracea HOM05D006152 ORTHO05D008137 5.4e-48 194.9 182 56.6
SEGI_04227 Sequoiadendron giganteum HOM05D006152 ORTHO05D008137 3.5e-47 192.2 179 53.6
AUR62019760 Chenopodium quinoa HOM05D001472 ORTHO05D002655 4.3e-45 185.3 178 53.4
Mapoly0124s0018 Marchantia polymorpha HOM05D006152 ORTHO05D008137 1.6e-44 183.3 188 50.0
SalBow5G3728 Salvia bowleyana HOM05D001472 ORTHO05D002655 1.8e-43 179.9 156 59.6
AUR62010759 Chenopodium quinoa HOM05D001472 ORTHO05D002655 2.4e-43 179.5 178 52.2
ECA234G4022 Erigeron canadensis HOM05D000464 ORTHO05D000408 9.0e-43 177.6 130 65.4
Nitab4.5_0001094g0060 Nicotiana tabacum HOM05D006152 ORTHO05D008137 3.4e-42 175.6 180 53.9
GSVIVG01001075001 Vitis vinifera HOM05D006152 ORTHO05D008137 7.8e-39 164.5 125 68.0
CARHR032820 Cardamine hirsuta HOM05D006152 ORTHO05D008137 1.1e-37 160.6 152 55.9
Ah.04g162170 Amaranthus hybridus HOM05D006152 ORTHO05D008137 6.2e-36 154.8 178 47.2
AUR62041375 Chenopodium quinoa HOM05D001472 ORTHO05D002655 2.4e-35 152.9 156 51.9
Pp3c26_6540 Physcomitrium patens HOM05D006152 ORTHO05D008137 9.0e-35 151.0 167 49.1
SMO347G0290 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 9.9e-34 147.5 179 45.8
AagrBONN_evm.TU.Sc2ySwM_228.5740 Anthoceros agrestis HOM05D006152 ORTHO05D008137 2.2e-33 146.4 155 51.0
Potri.018G111500 Populus trichocarpa HOM05D006152 ORTHO05D008137 4.9e-33 145.2 92 78.3
TAR383G0486 Trochodendron aralioides HOM05D006152 ORTHO05D008137 1.6e-31 140.2 104 63.5
AUR62002687 Chenopodium quinoa HOM05D006152 ORTHO05D008137 7.9e-31 137.9 101 67.3
Migut.K01256 Erythranthe guttata HOM05D006152 ORTHO05D008137 2.5e-29 132.9 84 72.6
SMO356G0422 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 2.1e-28 129.8 187 41.7
SMO169G0164 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 1.1e-27 127.5 171 42.1
Dinv42894 Davidia involucrata HOM05D006152 ORTHO05D008137 9.3e-24 114.4 54 90.7
TAR383G0013 Trochodendron aralioides HOM05D006152 ORTHO05D008137 7.9e-23 111.3 58 81.0
MD00G1188400 Malus domestica HOM05D006152 ORTHO05D008137 5.6e-21 105.1 54 83.3
Oeu028814.1 Olea europaea HOM05D006152 ORTHO05D008137 6.2e-20 101.7 141 43.3
Sc04g0006660 Simmondsia chinensis HOM05D006152 ORTHO05D008137 2.4e-19 99.8 79 59.5
Cre17.g729650 Chlamydomonas reinhardtii HOM05D006152 ORTHO05D008137 5.3e-19 98.6 118 44.9
Sc08g0005240 Simmondsia chinensis HOM05D006152 ORTHO05D008137 3.5e-15 85.9 108 47.2
SMO356G0211 Selaginella moellendorffii HOM05D006152 ORTHO05D008137 4.3e-13 79.0 65 53.8


User provided reference genes

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