Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G186900 Populus trichocarpa HOM05D005260 ORTHO05D006390 3.8e-213 744.6 376 100.0
Potri.018G109800 Populus trichocarpa HOM05D005260 ORTHO05D006390 7.4e-185 650.6 377 87.8
Sabra06G0142800 Salix brachista HOM05D005260 ORTHO05D006390 3.0e-178 628.6 376 86.2
Sabra06G0141800 Salix brachista HOM05D005260 ORTHO05D006390 3.7e-176 621.7 377 85.4
Sabra18G0092700 Salix brachista HOM05D005260 ORTHO05D006390 1.5e-172 609.8 381 83.7
Manes.14G111500 Manihot esculenta HOM05D005260 ORTHO05D006390 1.7e-149 533.1 379 74.4
QL02p092738 Quercus lobata HOM05D005260 ORTHO05D006390 2.9e-141 505.8 378 71.4
Haze_19232 Corylus avellana HOM05D005260 ORTHO05D006390 1.9e-135 486.5 376 69.7
Cfa020845 Carpinus fangiana HOM05D005260 ORTHO05D006390 3.5e-134 482.3 376 69.4
CiPaw.15G174600 Carya illinoinensis HOM05D005260 ORTHO05D006390 1.7e-133 479.9 380 69.2
CSS0012073 Camellia sinensis var. sinensis HOM05D005260 ORTHO05D006390 3.0e-133 479.2 388 68.6
Duzib168G1964 Durio zibethinus HOM05D005260 ORTHO05D006390 1.5e-132 476.9 373 67.6
Prupe.7G260500 Prunus persica HOM05D005260 ORTHO05D006390 1.5e-132 476.9 388 66.5
Thecc.09G033300 Theobroma cacao HOM05D005260 ORTHO05D006390 2.8e-131 472.6 373 66.8
Lalb_Chr13g0300941 Lupinus albus HOM05D005260 ORTHO05D006390 6.2e-131 471.5 384 66.7
Hma1.2p1_0028F.1_g017400 Hydrangea macrophylla HOM05D005260 ORTHO05D006390 3.1e-130 469.2 391 67.0
RcHm_v2.0_Chr2g0085941 Rosa chinensis HOM05D005260 ORTHO05D006390 3.1e-130 469.2 389 67.9
Ca_21113_v3 Cicer arietinum L. HOM05D005260 ORTHO05D006390 6.8e-130 468.0 381 66.7
FAN19G1826 Fragaria x ananassa HOM05D005260 ORTHO05D006390 3.7e-128 462.2 384 66.9
Eucgr.C02595 Eucalyptus grandis HOM05D005260 ORTHO05D006390 4.9e-128 461.8 382 63.6
Rhsim01G0035700 Rhododendron simsii HOM05D005260 ORTHO05D006390 4.9e-128 461.8 382 65.2
FAN23G1120 Fragaria x ananassa HOM05D005260 ORTHO05D006390 6.4e-128 461.5 384 67.4
Gohir.A13G184700 Gossypium hirsutum HOM05D005260 ORTHO05D006390 3.2e-127 459.1 373 65.1
Gohir.D13G191100 Gossypium hirsutum HOM05D005260 ORTHO05D006390 3.2e-127 459.1 374 64.2
Duzib150G0891 Durio zibethinus HOM05D005260 ORTHO05D006390 4.1e-127 458.8 373 66.2
Psat4g008640 Pisum sativum HOM05D005260 ORTHO05D006390 4.1e-127 458.8 379 66.5
Rhsim01G0045600 Rhododendron simsii HOM05D005260 ORTHO05D006390 1.2e-126 457.2 393 64.1
MD15G1155100 Malus domestica HOM05D005260 ORTHO05D006390 2.1e-126 456.4 387 64.9
Gorai.013G217000 Gossypium raimondii HOM05D005260 ORTHO05D006390 2.7e-126 456.1 373 64.1
FAN26G1108 Fragaria x ananassa HOM05D005260 ORTHO05D006390 3.5e-126 455.7 380 67.1
Cc06_g15200 Coffea canephora HOM05D005260 ORTHO05D006390 4.6e-126 455.3 382 65.7
Phvul.003G157300 Phaseolus vulgaris HOM05D005260 ORTHO05D006390 6.0e-126 454.9 379 66.0
FvH4_1g01150 Fragaria vesca HOM05D005260 ORTHO05D006390 7.8e-126 454.5 386 66.1
FAN28G1391 Fragaria x ananassa HOM05D005260 ORTHO05D006390 1.3e-125 453.8 380 66.3
TWI34G1822 Tripterygium wilfordii HOM05D005260 ORTHO05D006390 2.3e-125 453.0 387 65.4
TPR.G9269 Trifolium pratense HOM05D005260 ORTHO05D006390 6.6e-125 451.4 381 65.9
Glyma.02G202400 Glycine max HOM05D005260 ORTHO05D006390 1.1e-124 450.7 380 64.7
Rhsim01G0036000 Rhododendron simsii HOM05D005260 ORTHO05D006390 1.5e-124 450.3 393 63.1
TAR383G0874 Trochodendron aralioides HOM05D005260 ORTHO05D006390 2.5e-124 449.5 382 63.6
ClCG06G015480 Citrullus lanatus HOM05D005260 ORTHO05D006390 1.6e-123 446.8 390 64.1
Glyma.17G075400 Glycine max HOM05D005260 ORTHO05D006390 2.1e-123 446.4 382 64.4
SHI04751 Sapria himalayana HOM05D005260 ORTHO05D006390 3.6e-123 445.7 378 62.7
Peaxi162Scf00347g00088 Petunia axillaris HOM05D005260 ORTHO05D006390 4.7e-123 445.3 390 62.8
PGR102G1636 Punica granatum HOM05D005260 ORTHO05D006390 1.4e-122 443.7 372 64.0
Ciclev10008691m.g Citrus clementina HOM05D005260 ORTHO05D006390 1.8e-122 443.4 374 65.2
Medtr4g131190 Medicago truncatula HOM05D005260 ORTHO05D006390 4.0e-122 442.2 370 66.2
CsaV3_1G028770 Cucumis sativus L. HOM05D005260 ORTHO05D006390 6.8e-122 441.4 392 64.0
TAR625G1225 Trochodendron aralioides HOM05D005260 ORTHO05D006390 6.8e-122 441.4 383 62.1
Lj4g0015138 Lotus japonicus HOM05D005260 ORTHO05D006390 2.0e-121 439.9 374 64.2
MELO3C010238.2 Cucumis melo HOM05D005260 ORTHO05D006390 3.4e-121 439.1 392 63.8
Nitab4.5_0008157g0020 Nicotiana tabacum HOM05D005260 ORTHO05D006390 5.8e-121 438.3 395 61.3
RhsimUnG0040000 Rhododendron simsii HOM05D005260 ORTHO05D006390 9.9e-121 437.6 386 62.4
Solyc07g005340.2 Solanum lycopersicum HOM05D005260 ORTHO05D006390 9.9e-121 437.6 394 62.4
Sc18g0000130 Simmondsia chinensis HOM05D005260 ORTHO05D006390 1.7e-120 436.8 387 63.8
Sopen07g001450 Solanum pennellii HOM05D005260 ORTHO05D006390 2.2e-120 436.4 394 61.9
Atru.chr7.58 Acer truncatum HOM05D005260 ORTHO05D006390 3.7e-120 435.6 386 63.7
Atru.chr6.1391 Acer truncatum HOM05D005260 ORTHO05D006390 4.9e-120 435.3 386 63.7
PGSC0003DMG400003180 Solanum tuberosum HOM05D005260 ORTHO05D006390 8.4e-120 434.5 394 61.9
Nitab4.5_0001201g0060 Nicotiana tabacum HOM05D005260 ORTHO05D006390 2.4e-119 433.0 388 61.3
VMungo1215G1942 Vigna mungo HOM05D005260 ORTHO05D006390 7.1e-119 431.4 379 63.3
Lsat_1_v5_gn_6_38260 Lactuca sativa HOM05D005260 ORTHO05D006390 2.7e-118 429.5 385 61.0
CAN.G1116.9 Capsicum annuum HOM05D005260 ORTHO05D006390 6.6e-117 424.9 390 60.8
Oeu050475.1 Olea europaea HOM05D005260 ORTHO05D006390 2.5e-116 422.9 379 62.5
Actinidia04287 Actinidia chinensis HOM05D005260 ORTHO05D006390 2.8e-115 419.5 372 62.9
SGA_v2.0_scaffold265G46122 Striga asiatica HOM05D005260 ORTHO05D006390 6.8e-114 414.8 377 60.2
Gorai.006G273400 Gossypium raimondii HOM05D005260 ORTHO05D006390 1.2e-113 414.1 349 63.9
Oeu051690.1 Olea europaea HOM05D005260 ORTHO05D006390 3.4e-113 412.5 377 62.1
COL.COLO4_18779 Corchorus olitorius HOM05D005260 ORTHO05D006390 2.2e-112 409.8 374 61.5
MSTRG.6120 Avicennia marina HOM05D005260 ORTHO05D006390 4.9e-112 408.7 380 60.8
Sed0012515 Sechium edule HOM05D005260 ORTHO05D006390 1.1e-111 407.5 392 60.2
HanXRQChr13g0397631 Helianthus annuus HOM05D005260 ORTHO05D006390 6.0e-110 401.7 385 60.0
Lj7P455T24 Lonicera japonica HOM05D005260 ORTHO05D006390 1.9e-108 396.7 352 62.2
Migut.J01331 Erythranthe guttata HOM05D005260 ORTHO05D006390 9.6e-108 394.4 381 58.3
Cpa.g.sc46.130 Carica papaya HOM05D005260 ORTHO05D006390 2.8e-107 392.9 380 60.0
ECA233G0390 Erigeron canadensis HOM05D005260 ORTHO05D006390 4.8e-107 392.1 339 62.5
GSVIVG01023592001 Vitis vinifera HOM05D005260 ORTHO05D006390 6.9e-106 388.3 373 61.1
SalBow1G8640 Salvia bowleyana HOM05D005260 ORTHO05D006390 7.6e-105 384.8 377 56.5
BraA10t43614Z Brassica rapa HOM05D005260 ORTHO05D006390 1.4e-103 380.6 386 57.3
BcaC04g19916 Brassica carinata HOM05D005260 ORTHO05D006390 3.2e-103 379.4 385 57.9
BolC9t57839H Brassica oleracea HOM05D005260 ORTHO05D006390 4.2e-103 379.0 385 57.9
C09p49880 Brassica napus HOM05D005260 ORTHO05D006390 7.1e-103 378.3 385 57.7
ATR0739G050 Amborella trichopoda HOM05D005260 ORTHO05D006390 9.3e-103 377.9 400 55.0
A10p16150 Brassica napus HOM05D005260 ORTHO05D006390 9.3e-103 377.9 388 57.5
BcaB05g22395 Brassica carinata HOM05D005260 ORTHO05D006390 2.1e-102 376.7 380 58.4
Thhalv10013961m.g Eutrema salsugineum HOM05D005260 ORTHO05D006390 2.7e-102 376.3 389 57.3
AT5G58020 Arabidopsis thaliana HOM05D005260 ORTHO05D006390 3.9e-101 372.5 389 57.3
BolC2t07483H Brassica oleracea HOM05D005260 ORTHO05D006390 2.5e-100 369.8 382 58.1
A02p08050 Brassica napus HOM05D005260 ORTHO05D006390 7.3e-100 368.2 382 56.8
AL8G34120 Arabidopsis lyrata HOM05D005260 ORTHO05D006390 2.1e-99 366.7 389 56.0
Sp6g19700 Schrenkiella parvula HOM05D005260 ORTHO05D006390 2.8e-99 366.3 380 56.8
CARHR271830 Cardamine hirsuta HOM05D005260 ORTHO05D006390 4.8e-99 365.5 390 57.2
BraA02t05877Z Brassica rapa HOM05D005260 ORTHO05D006390 8.1e-99 364.8 384 56.2
Aqoxy3G00834 Aquilegia oxysepala HOM05D005260 ORTHO05D006390 1.1e-98 364.4 386 57.5
Carub.0008s1857 Capsella rubella HOM05D005260 ORTHO05D006390 1.1e-98 364.4 386 57.3
EL10Ac8g18850 Beta vulgaris HOM05D005260 ORTHO05D006390 3.1e-98 362.8 385 54.5
PSO170G6608 Papaver somniferum HOM05D005260 ORTHO05D006390 3.1e-98 362.8 394 55.6
THA.LOC104817828 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 3.1e-98 362.8 377 56.0
MBI14_g37102_MAGBIO Magnolia biondii HOM05D005260 ORTHO05D006390 6.9e-98 361.7 385 54.3
Ah.11g045050 Amaranthus hybridus HOM05D005260 ORTHO05D006390 1.5e-97 360.5 376 56.1
PSO017G5909 Papaver somniferum HOM05D005260 ORTHO05D006390 2.0e-97 360.1 394 55.3
C02p13690 Brassica napus HOM05D005260 ORTHO05D006390 5.8e-97 358.6 385 56.6
Aa31LG3G13860 Aethionema arabicum HOM05D005260 ORTHO05D006390 9.9e-97 357.8 378 56.6
THA.LOC104817826 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 8.4e-96 354.8 375 54.4
SGA_v2.0_scaffold45G17044 Striga asiatica HOM05D005260 ORTHO05D006390 2.3e-93 346.7 370 54.3
Os06g0183900 Oryza sativa ssp. japonica HOM05D005260 ORTHO05D006390 2.6e-89 333.2 333 58.3
Pp3c14_10930 Physcomitrium patens HOM05D005260 ORTHO05D006390 7.6e-89 331.6 363 51.5
SEGI_13576 Sequoiadendron giganteum HOM05D005260 ORTHO05D006390 3.8e-88 329.3 373 49.3
DCAR_020883 Daucus carota HOM05D005260 ORTHO05D006390 8.4e-88 328.2 283 63.6
Dinv42879 Davidia involucrata HOM05D005260 ORTHO05D006390 1.0e-85 321.2 354 55.4
Dinv43221 Davidia involucrata HOM05D005260 ORTHO05D006390 1.0e-85 321.2 354 55.4
CiPaw.16G114800 Carya illinoinensis HOM05D005260 ORTHO05D006390 7.4e-84 315.1 290 60.7
AUR62031434 Chenopodium quinoa HOM05D005260 ORTHO05D006390 2.8e-83 313.2 311 56.9
AagrBONN_evm.TU.Sc2ySwM_228.4055 Anthoceros agrestis HOM05D005260 ORTHO05D006390 1.4e-82 310.8 375 47.7
Gohir.D09G249000 Gossypium hirsutum HOM05D005260 ORTHO05D006390 5.9e-81 305.4 287 59.6
Mapoly0043s0023 Marchantia polymorpha HOM05D005260 ORTHO05D006390 1.9e-79 300.4 400 44.8
SMO307G0072 Selaginella moellendorffii HOM05D005260 ORTHO05D006390 1.3e-77 294.3 327 50.8
AUR62021106 Chenopodium quinoa HOM05D005260 ORTHO05D006390 5.3e-74 282.3 254 57.9
CBR_g44540 Chara braunii HOM05D005260 ORTHO05D006390 1.1e-68 264.6 354 45.5
Actinidia38337 Actinidia chinensis HOM05D005260 ORTHO05D006390 1.2e-65 254.6 169 74.0
Gohir.D07G030400 Gossypium hirsutum HOM05D005260 ORTHO05D006390 1.5e-60 237.7 291 50.2
Gorai.001G031600 Gossypium raimondii HOM05D005260 ORTHO05D006390 3.3e-60 236.5 291 49.8
unitig_0.g2819 Utricularia gibba HOM05D005260 ORTHO05D006390 1.7e-51 207.6 221 53.8
Lalb_Chr12g0198621 Lupinus albus HOM05D005260 ORTHO05D006390 6.5e-48 195.7 198 58.1
HPP92_018747 Vanilla planifolia HOM05D005260 ORTHO05D006390 8.8e-45 185.3 206 54.4
CDE02G0414 Ceratophyllum demersum HOM05D005260 ORTHO05D006390 8.5e-40 168.7 351 38.7
Cre03.g150650 Chlamydomonas reinhardtii HOM05D005260 ORTHO05D006390 1.8e-37 161.0 277 37.9
PRCOL_00003864 Prasinoderma coloniale HOM05D005260 ORTHO05D006390 9.5e-31 138.7 186 40.9
HPP92_018748 Vanilla planifolia HOM05D005260 ORTHO05D006390 4.7e-30 136.3 128 55.5
AagrBONN_evm.TU.Sc2ySwM_344.4069 Anthoceros agrestis HOM05D005260 ORTHO05D006390 1.8e-29 134.4 179 46.9
HanXRQChr09g0262911 Helianthus annuus HOM05D005260 ORTHO05D006390 3.0e-29 133.7 80 73.8
TAR625G0635 Trochodendron aralioides HOM05D005260 ORTHO05D006390 2.0e-28 131.0 148 53.4
Atru.chr13.1961 Acer truncatum HOM05D005260 ORTHO05D006390 1.3e-27 128.3 167 50.3
MELO3C004727.2 Cucumis melo HOM05D005260 ORTHO05D006390 2.4e-26 124.0 84 72.6
ATR0579G027 Amborella trichopoda HOM05D005260 ORTHO05D006390 5.8e-20 102.8 119 48.7
Zm00001eb158280 Zea mays HOM05D005260 ORTHO05D006390 2.5e-15 87.4 92 47.8
ClCG06G012260 Citrullus lanatus HOM05D005260 ORTHO05D006390 4.7e-14 83.2 54 70.4
BolC3t13905H Brassica oleracea HOM05D005260 ORTHO05D006390 3.5e-09 67.0 58 63.8
MCO05G557 Micromonas commoda HOM05D005260 ORTHO05D006390 3.5e-09 67.0 220 24.5
CiPaw.12G098000 Carya illinoinensis HOM05D003547 ORTHO05D004236 6.0e-09 66.2 50 58.0
Cfa026666 Carpinus fangiana HOM05D005260 ORTHO05D006390 3.0e-08 63.9 292 25.0
Gorai.011G083100 Gossypium raimondii HOM05D005260 ORTHO05D006390 3.0e-08 63.9 78 50.0
CBR_g37538 Chara braunii HOM05D005260 ORTHO05D006390 1.9e-07 61.2 246 22.8
unitig_747.g21900 Utricularia gibba HOM05D005260 ORTHO05D006390 9.5e-07 58.9 75 49.3


User provided reference genes

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