Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G183000 Populus trichocarpa HOM05D003759 ORTHO05D004149 8.2e-77 290.8 207 100.0
Sabra06G0139200 Salix brachista HOM05D003759 ORTHO05D004149 2.0e-59 233.0 209 87.6
Sabra18G0089900 Salix brachista HOM05D003759 ORTHO05D004149 5.6e-41 171.8 205 76.1
Manes.06G035500 Manihot esculenta HOM05D003759 ORTHO05D004149 4.4e-38 162.2 211 59.7
Cpa.g.sc46.168 Carica papaya HOM05D003759 ORTHO05D004149 4.3e-33 145.6 212 51.9
COL.COLO4_18822 Corchorus olitorius HOM05D003759 ORTHO05D004149 5.8e-30 135.2 211 58.8
Duzib168G1894 Durio zibethinus HOM05D003759 ORTHO05D004149 9.8e-30 134.4 212 59.0
TWI34G0689 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 1.7e-29 133.7 209 62.2
QL02p093514 Quercus lobata HOM05D003759 ORTHO05D004149 1.7e-26 123.6 209 65.1
Gohir.D07G031400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 3.9e-26 122.5 212 58.5
Gorai.001G032800 Gossypium raimondii HOM05D003759 ORTHO05D004149 3.9e-26 122.5 212 58.5
Atru.chr7.24 Acer truncatum HOM05D003759 ORTHO05D004149 2.5e-25 119.8 213 63.4
Gohir.A07G027400 Gossypium hirsutum HOM05D003759 ORTHO05D004149 2.5e-25 119.8 212 58.5
MD15G1151500 Malus domestica HOM05D003759 ORTHO05D004149 3.3e-25 119.4 211 63.5
Thecc.09G028600 Theobroma cacao HOM05D003759 ORTHO05D004149 4.3e-25 119.0 212 57.1
CiPaw.15G166900 Carya illinoinensis HOM05D003759 ORTHO05D004149 9.5e-25 117.9 207 62.8
CiPaw.16G108400 Carya illinoinensis HOM05D003759 ORTHO05D004149 9.5e-25 117.9 206 63.1
Potri.018G105300 Populus trichocarpa HOM05D003759 ORTHO05D004149 1.2e-24 117.5 76 81.6
Gohir.D08G273700 Gossypium hirsutum HOM05D003759 ORTHO05D004149 1.6e-24 117.1 211 44.5
TWI32G1309 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 2.1e-24 116.7 208 60.6
FAN23G1979 Fragaria x ananassa HOM05D003759 ORTHO05D004149 2.8e-24 116.3 207 59.9
FAN28G1366 Fragaria x ananassa HOM05D003759 ORTHO05D004149 3.6e-24 115.9 208 58.7
Gorai.004G292200 Gossypium raimondii HOM05D003759 ORTHO05D004149 3.6e-24 115.9 209 43.1
GSVIVG01023625001 Vitis vinifera HOM05D003759 ORTHO05D004149 1.8e-23 113.6 209 51.7
FvH4_1g00810 Fragaria vesca HOM05D003759 ORTHO05D004149 2.3e-23 113.2 206 59.7
Gohir.A05G052900 Gossypium hirsutum HOM05D003759 ORTHO05D004149 2.3e-23 113.2 212 43.4
Gohir.D05G054500 Gossypium hirsutum HOM05D003759 ORTHO05D004149 6.8e-23 111.7 211 45.5
Ciclev10009224m.g Citrus clementina HOM05D003759 ORTHO05D004149 8.9e-23 111.3 209 59.8
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 8.9e-23 111.3 214 50.0
Gorai.009G056200 Gossypium raimondii HOM05D003759 ORTHO05D004149 1.5e-22 110.5 211 45.0
RcHm_v2.0_Chr2g0085521 Rosa chinensis HOM05D003759 ORTHO05D004149 1.5e-22 110.5 206 61.2
TWI63G0632 Tripterygium wilfordii HOM05D003759 ORTHO05D004149 1.5e-22 110.5 235 51.9
MD02G1006500 Malus domestica HOM05D003759 ORTHO05D004149 4.4e-22 109.0 209 61.7
Cfa020811 Carpinus fangiana HOM05D003759 ORTHO05D004149 5.8e-22 108.6 211 59.7
Haze_19170 Corylus avellana HOM05D003759 ORTHO05D004149 5.8e-22 108.6 210 58.1
CANSAT11G0712 Cannabis sativa HOM05D003759 ORTHO05D004149 7.5e-22 108.2 220 42.3
CSS0036931 Camellia sinensis var. sinensis HOM05D003759 ORTHO05D004149 9.9e-22 107.8 249 54.2
Gohir.A08G252100 Gossypium hirsutum HOM05D003759 ORTHO05D004149 8.3e-21 104.8 208 36.5
Duzib150G1598 Durio zibethinus HOM05D003759 ORTHO05D004149 1.4e-20 104.0 211 49.3
Prupe.7G264400 Prunus persica HOM05D003759 ORTHO05D004149 1.2e-19 100.9 206 47.1
ClCG06G012480 Citrullus lanatus HOM05D003759 ORTHO05D004149 1.6e-19 100.5 219 46.6
CsaV3_1G029030 Cucumis sativus L. HOM05D003759 ORTHO05D004149 2.1e-19 100.1 213 47.9
Medtr4g130700 Medicago truncatula HOM05D003759 ORTHO05D004149 6.0e-19 98.6 213 38.5
Psat4g009880 Pisum sativum HOM05D003759 ORTHO05D004149 6.0e-19 98.6 211 35.1
MELO3C010213.2 Cucumis melo HOM05D003759 ORTHO05D004149 1.3e-18 97.4 213 46.9
Actinidia38668 Actinidia chinensis HOM05D003759 ORTHO05D004149 3.0e-18 96.3 252 52.0
TPR.G24855 Trifolium pratense HOM05D003759 ORTHO05D004149 3.0e-18 96.3 212 35.4
Lalb_Chr08g0234281 Lupinus albus HOM05D003759 ORTHO05D004149 6.6e-18 95.1 229 33.6
Phvul.003G155300 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 6.6e-18 95.1 209 34.9
VMungo1215G0492 Vigna mungo HOM05D003759 ORTHO05D004149 6.6e-18 95.1 215 37.2
Glyma.02G204900 Glycine max HOM05D003759 ORTHO05D004149 8.6e-18 94.7 210 37.1
arahy.Tifrunner.gnm1.ann1.5MW7KS Arachis hypogaea HOM05D003759 ORTHO05D004149 2.5e-17 93.2 211 45.0
arahy.Tifrunner.gnm1.ann1.WN4J7U Arachis hypogaea HOM05D003759 ORTHO05D004149 2.5e-17 93.2 211 45.0
Ca_21134_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 5.6e-17 92.0 209 47.8
Ca_21136_v3 Cicer arietinum L. HOM05D003759 ORTHO05D004149 5.6e-17 92.0 209 47.8
Lalb_Chr13g0300821 Lupinus albus HOM05D003759 ORTHO05D004149 7.3e-17 91.7 229 43.2
Lj4g0026574 Lotus japonicus HOM05D003759 ORTHO05D004149 9.5e-17 91.3 212 34.4
Glyma.17G073100 Glycine max HOM05D003759 ORTHO05D004149 1.6e-16 90.5 209 35.9
SalBow1G3284 Salvia bowleyana HOM05D003759 ORTHO05D004149 2.8e-16 89.7 249 31.7
TAR625G0365 Trochodendron aralioides HOM05D003759 ORTHO05D004149 2.8e-16 89.7 212 34.4
Lj6g0003054 Lotus japonicus HOM05D003759 ORTHO05D004149 6.2e-16 88.6 207 45.4
Phvul.009G204700 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 1.1e-15 87.8 207 34.3
Lalb_Chr12g0198751 Lupinus albus HOM05D003759 ORTHO05D004149 1.8e-15 87.0 207 45.9
vmacro06067 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 1.8e-15 87.0 258 41.1
Oeu028997.1 Olea europaea HOM05D003759 ORTHO05D004149 2.4e-15 86.7 208 33.2
VMungo1309G0866 Vigna mungo HOM05D003759 ORTHO05D004149 2.4e-15 86.7 205 33.2
TAR383G0583 Trochodendron aralioides HOM05D003759 ORTHO05D004149 3.1e-15 86.3 206 32.5
ClCG02G014430 Citrullus lanatus HOM05D003759 ORTHO05D004149 4.4e-14 82.4 209 34.0
SGA_v2.0_scaffold45G17024 Striga asiatica HOM05D003759 ORTHO05D004149 4.4e-14 82.4 224 31.7
Rhsim03G0257600 Rhododendron simsii HOM05D003759 ORTHO05D004149 5.8e-14 82.0 259 41.3
Cc06_g14820 Coffea canephora HOM05D003759 ORTHO05D004149 7.6e-14 81.6 67 64.2
PGR102G0437 Punica granatum HOM05D003759 ORTHO05D004149 7.6e-14 81.6 231 33.3
CsaV3_1G029050 Cucumis sativus L. HOM05D003759 ORTHO05D004149 1.7e-13 80.5 68 61.8
Hma1.2p1_0222F.1_g093656 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 1.7e-13 80.5 64 67.2
Hma1.2p1_2680F.1_g326800 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 1.7e-13 80.5 64 67.2
THA.LOC104819991 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 1.7e-13 80.5 212 32.5
Actinidia38317 Actinidia chinensis HOM05D003759 ORTHO05D004149 2.2e-13 80.1 255 42.7
Migut.J01364 Erythranthe guttata HOM05D003759 ORTHO05D004149 2.2e-13 80.1 241 32.8
CsaV3_2G007570 Cucumis sativus L. HOM05D003759 ORTHO05D004149 3.8e-13 79.3 210 34.3
Hma1.2p1_0222F.1_g093653 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 6.4e-13 78.6 288 42.7
Hma1.2p1_2680F.1_g326810 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 6.4e-13 78.6 288 42.7
MSTRG.6151 Avicennia marina HOM05D003759 ORTHO05D004149 8.4e-13 78.2 251 28.7
MBI15_g18234_MAGBIO Magnolia biondii HOM05D003759 ORTHO05D004149 1.1e-12 77.8 206 34.5
Dinv42845 Davidia involucrata HOM05D003759 ORTHO05D004149 1.4e-12 77.4 74 56.8
Oeu021304.1 Olea europaea HOM05D003759 ORTHO05D004149 1.4e-12 77.4 227 29.5
Sp7g28510 Schrenkiella parvula HOM05D003759 ORTHO05D004149 2.4e-12 76.6 209 32.5
AL7G21510 Arabidopsis lyrata HOM05D003759 ORTHO05D004149 3.2e-12 76.3 208 30.8
THA.LOC104803918 Tarenaya hassleriana HOM05D003759 ORTHO05D004149 3.2e-12 76.3 207 30.0
SalBow1G6739 Salvia bowleyana HOM05D003759 ORTHO05D004149 4.2e-12 75.9 251 27.1
CAN.G551.47 Capsicum annuum HOM05D003759 ORTHO05D004149 5.4e-12 75.5 232 31.5
Peaxi162Scf00062g00131 Petunia axillaris HOM05D003759 ORTHO05D004149 1.2e-11 74.3 244 32.8
Nitab4.5_0008875g0010 Nicotiana tabacum HOM05D003759 ORTHO05D004149 3.5e-11 72.8 61 54.1
AT4G30630 Arabidopsis thaliana HOM05D003759 ORTHO05D004149 4.6e-11 72.4 208 30.8
Dinv41365 Davidia involucrata HOM05D003759 ORTHO05D004149 4.6e-11 72.4 69 60.9
Rhsim01G0028200 Rhododendron simsii HOM05D003759 ORTHO05D004149 4.6e-11 72.4 254 48.4
CAN.G160.50 Capsicum annuum HOM05D003759 ORTHO05D004149 6.0e-11 72.0 69 56.5
Thhalv10026294m.g Eutrema salsugineum HOM05D003759 ORTHO05D004149 7.8e-11 71.6 208 32.2
Lsat_1_v5_gn_5_90100 Lactuca sativa HOM05D003759 ORTHO05D004149 7.8e-11 71.6 212 32.5
ECA234G4063 Erigeron canadensis HOM05D003759 ORTHO05D004149 1.0e-10 71.2 217 32.3
Peaxi162Scf00401g00425 Petunia axillaris HOM05D003759 ORTHO05D004149 1.0e-10 71.2 63 55.6
Solyc07g005690.3 Solanum lycopersicum HOM05D003759 ORTHO05D004149 2.3e-10 70.1 63 55.6
PGSC0003DMG400011142 Solanum tuberosum HOM05D003759 ORTHO05D004149 2.3e-10 70.1 63 55.6
Sed0021485 Sechium edule HOM05D003759 ORTHO05D004149 5.1e-10 68.9 208 32.7
Nitab4.5_0005869g0060 Nicotiana tabacum HOM05D003759 ORTHO05D004149 6.6e-10 68.6 245 27.3
SGA_v2.0_scaffold265G46100 Striga asiatica HOM05D003759 ORTHO05D004149 8.7e-10 68.2 248 28.2
vmacro16796 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 8.7e-10 68.2 253 44.7
CARHR238510 Cardamine hirsuta HOM05D003759 ORTHO05D004149 1.1e-09 67.8 208 30.8
Nitab4.5_0001571g0070 Nicotiana tabacum HOM05D003759 ORTHO05D004149 1.1e-09 67.8 245 25.7
Sopen07g001800 Solanum pennellii HOM05D003759 ORTHO05D004149 1.9e-09 67.0 63 54.0
HanXRQChr10g0313651 Helianthus annuus HOM05D003759 ORTHO05D004149 2.5e-09 66.6 209 30.1
Eucgr.C00252 Eucalyptus grandis HOM05D003759 ORTHO05D004149 4.3e-09 65.9 238 29.8
Nitab4.5_0002891g0100 Nicotiana tabacum HOM05D003759 ORTHO05D004149 1.6e-08 63.9 245 27.3
MELO3C004129.2 Cucumis melo HOM05D003759 ORTHO05D004149 4.7e-08 62.4 212 31.1
Nn8g39944 Nelumbo nucifera HOM05D003759 ORTHO05D004149 1.1e-07 61.2 50 60.0
Sopen12g004840 Solanum pennellii HOM05D003759 ORTHO05D004149 1.1e-07 61.2 248 26.2
Solyc12g009970.2 Solanum lycopersicum HOM05D003759 ORTHO05D004149 1.4e-07 60.8 248 25.8
PGSC0003DMG400007832 Solanum tuberosum HOM05D003759 ORTHO05D004149 1.4e-07 60.8 248 26.2
Actinidia24379 Actinidia chinensis HOM05D003759 ORTHO05D004149 2.4e-07 60.1 77 46.8
BcaNung00572 Brassica carinata HOM05D003759 ORTHO05D004149 3.1e-07 59.7 208 31.2
HanXRQChr12g0357671 Helianthus annuus HOM05D003759 ORTHO05D004149 4.0e-07 59.3 215 30.7
Lsat_1_v5_gn_7_50020 Lactuca sativa HOM05D003759 ORTHO05D004149 4.0e-07 59.3 224 27.7
Aa31LG3G13740 Aethionema arabicum HOM05D003759 ORTHO05D004149 1.2e-06 57.8 210 32.4
BcaNung02973 Brassica carinata HOM05D003759 ORTHO05D004149 1.2e-06 57.8 209 28.2
Oeu026461.3 Olea europaea HOM05D003759 ORTHO05D004149 1.2e-06 57.8 237 25.7
BcaNung04561 Brassica carinata HOM05D003759 ORTHO05D004149 1.5e-06 57.4 210 30.5
C07p58060 Brassica napus HOM05D000058 ORTHO05D000077 2.0e-06 57.0 208 30.3
BolC7t46265H Brassica oleracea HOM05D003759 ORTHO05D004149 2.0e-06 57.0 208 30.3
Sp6g19580 Schrenkiella parvula HOM05D003759 ORTHO05D004149 2.0e-06 57.0 210 31.9
Thhalv10014665m.g Eutrema salsugineum HOM05D003759 ORTHO05D004149 2.6e-06 56.6 212 31.6
BraA01t00706Z Brassica rapa HOM05D003759 ORTHO05D004149 3.4e-06 56.2 211 28.9
C01p08320 Brassica napus HOM05D003759 ORTHO05D004149 7.6e-06 55.1 211 28.4
BcaC09g51852 Brassica carinata HOM05D003759 ORTHO05D004149 9.9e-06 54.7 211 28.4
A01p07630 Brassica napus HOM05D003759 ORTHO05D004149 9.9e-06 54.7 211 28.4


User provided reference genes

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