Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 8.8e-96 353.6 176 100.0
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 1.3e-75 286.6 195 77.9
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 8.8e-72 273.9 174 78.2
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 7.5e-71 270.8 176 75.0
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 1.2e-68 263.5 174 74.1
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 2.7e-68 262.3 174 71.3
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 2.9e-67 258.8 174 73.0
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 5.0e-67 258.1 174 68.4
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 1.1e-66 256.9 174 69.5
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 7.2e-66 254.2 173 72.3
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 1.2e-65 253.4 174 67.2
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 2.8e-65 252.3 174 67.2
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 6.1e-65 251.1 173 70.5
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 1.0e-64 250.4 173 75.1
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.8e-64 249.6 174 66.7
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.8e-64 249.6 174 66.7
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 5.2e-64 248.1 176 69.3
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 5.7e-63 244.6 172 66.3
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 9.8e-63 243.8 173 68.8
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 9.8e-63 243.8 173 70.5
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 8.3e-62 240.7 195 60.0
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 1.8e-61 239.6 173 68.2
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 5.9e-60 234.6 173 64.7
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 5.9e-60 234.6 173 64.7
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 7.8e-60 234.2 172 68.6
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 2.3e-59 232.6 172 66.3
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 3.8e-59 231.9 174 64.4
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 5.0e-59 231.5 174 64.9
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 6.6e-59 231.1 173 61.3
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 1.1e-58 230.3 154 70.1
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 1.1e-58 230.3 174 64.4
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 1.9e-58 229.6 173 63.6
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 4.3e-58 228.4 173 61.8
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 4.3e-58 228.4 176 61.9
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 7.3e-58 227.6 175 65.1
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 2.1e-57 226.1 173 61.3
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 2.8e-57 225.7 170 60.6
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 4.7e-57 224.9 173 63.0
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 6.1e-57 224.6 173 60.1
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 6.1e-57 224.6 173 59.5
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 6.1e-57 224.6 173 59.5
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 8.0e-57 224.2 171 60.8
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 1.0e-56 223.8 173 65.3
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 1.4e-56 223.4 175 63.4
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 2.3e-56 222.6 173 61.8
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 3.0e-56 222.2 173 62.4
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 3.0e-56 222.2 174 61.5
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 3.0e-56 222.2 174 59.8
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 4.0e-56 221.9 175 62.3
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 4.0e-56 221.9 173 63.0
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 5.2e-56 221.5 173 63.6
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 6.8e-56 221.1 174 59.8
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 6.8e-56 221.1 173 61.8
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 8.9e-56 220.7 173 62.4
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 2.0e-55 219.5 175 59.4
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 4.4e-55 218.4 173 59.0
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 5.7e-55 218.0 175 60.6
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 1.7e-54 216.5 173 57.2
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 2.9e-54 215.7 173 60.7
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 1.8e-53 213.0 198 53.0
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 2.4e-53 212.6 171 62.0
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 5.4e-53 211.5 156 67.3
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 1.2e-52 210.3 199 54.8
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 1.2e-52 210.3 172 58.7
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 2.0e-52 209.5 160 60.0
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 2.0e-52 209.5 173 59.5
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 2.7e-52 209.1 174 60.3
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 2.7e-52 209.1 176 56.2
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 4.6e-52 208.4 160 59.4
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 4.6e-52 208.4 153 62.1
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 4.6e-52 208.4 191 57.1
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 5.9e-52 208.0 209 53.1
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 1.3e-51 206.8 153 64.7
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 1.3e-51 206.8 162 62.3
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 1.3e-51 206.8 173 60.7
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 1.7e-51 206.5 174 59.8
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 3.9e-51 205.3 173 59.5
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 7.3e-50 201.1 149 64.4
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 1.6e-49 199.9 174 58.0
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 6.2e-49 198.0 173 59.5
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 8.0e-49 197.6 198 52.0
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 6.8e-48 194.5 189 53.4
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 2.6e-47 192.6 174 57.5
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 4.4e-47 191.8 174 59.2
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 7.5e-47 191.0 147 64.6
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 3.7e-46 188.7 175 52.0
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 3.7e-46 188.7 223 46.6
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 2.3e-43 179.5 258 41.5
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 4.7e-41 171.8 172 51.7
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 1.4e-40 170.2 169 50.9
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 9.2e-37 157.5 179 46.4
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 2.3e-35 152.9 112 65.2
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 7.3e-34 147.9 126 57.1
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 5.4e-29 131.7 91 67.0
Hma1.2p1_0222F.1_g093710 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 7.1e-29 131.3 91 71.4
Hma1.2p1_0222F.1_g093742 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 7.1e-29 131.3 91 71.4
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 2.5e-26 122.9 91 62.6
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 1.1e-21 107.5 95 56.8
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 2.1e-20 103.2 112 47.3
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 2.1e-20 103.2 112 47.3
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 3.4e-15 85.9 132 36.4
Ah.14g084570 Amaranthus hybridus HOM05D007038 ORTHO05D008893 3.8e-14 82.4 59 67.8


User provided reference genes

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