Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 3.2e-209 731.5 361 100.0
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 4.2e-193 677.9 361 93.1
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 1.2e-152 543.5 368 74.7
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 9.4e-129 464.2 369 66.9
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 6.3e-125 451.4 373 63.5
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 9.2e-124 447.6 366 65.0
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.5e-121 440.3 363 62.5
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 4.7e-120 435.3 374 61.5
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 1.0e-119 434.1 364 63.7
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 1.8e-119 433.3 367 62.4
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 8.9e-119 431.0 363 61.4
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 2.0e-118 429.9 373 61.9
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 2.0e-118 429.9 373 61.9
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 4.4e-118 428.7 361 62.9
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 4.4e-118 428.7 361 62.9
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 1.3e-117 427.2 373 61.4
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 1.4e-116 423.7 368 61.1
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.8e-116 423.3 367 59.9
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.2e-115 420.6 367 59.7
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 3.5e-115 419.1 389 58.4
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 4.6e-115 418.7 370 60.0
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 2.3e-114 416.4 371 59.8
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 3.0e-114 416.0 366 59.0
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 5.0e-114 415.2 371 59.0
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 8.6e-114 414.5 367 59.9
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 1.5e-113 413.7 364 61.8
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.5e-113 412.9 367 60.2
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 3.3e-113 412.5 364 61.0
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 3.3e-113 412.5 371 58.8
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 4.3e-113 412.1 367 59.7
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 5.6e-113 411.8 369 58.8
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 5.6e-113 411.8 371 59.3
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 9.5e-113 411.0 364 60.2
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 1.6e-112 410.2 371 59.3
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 1.6e-112 410.2 369 58.3
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 1.6e-112 410.2 369 59.9
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 3.6e-112 409.1 372 57.3
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 4.7e-112 408.7 367 59.4
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 4.7e-112 408.7 369 59.9
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.2e-112 408.3 369 58.8
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 1.0e-111 407.5 367 59.9
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 1.4e-111 407.1 368 60.1
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 1.8e-111 406.8 361 60.1
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 4.4e-110 402.1 363 59.0
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 9.8e-110 401.0 368 59.0
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 1.7e-109 400.2 356 59.0
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 1.7e-109 400.2 379 56.7
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 1.7e-109 400.2 379 56.7
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 1.7e-109 400.2 371 58.2
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 3.7e-109 399.1 368 58.2
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 3.7e-109 399.1 370 58.1
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 4.9e-109 398.7 370 58.1
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 3.2e-108 396.0 358 58.7
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 4.1e-108 395.6 359 58.5
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 4.1e-108 395.6 367 58.3
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.6e-107 392.1 355 58.3
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 6.0e-107 391.7 363 58.4
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 7.8e-107 391.3 370 56.8
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 1.0e-106 391.0 378 56.9
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 1.3e-106 390.6 376 56.4
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 1.3e-106 390.6 365 57.0
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 1.3e-106 390.6 377 58.1
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 2.3e-106 389.8 380 56.1
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 2.3e-106 389.8 363 58.4
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 3.0e-106 389.4 356 57.3
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 8.6e-106 387.9 360 57.2
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 1.9e-105 386.7 370 58.9
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 3.3e-105 386.0 362 58.6
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 3.3e-105 386.0 364 58.5
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 3.3e-105 386.0 359 56.8
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 4.3e-105 385.6 371 57.1
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 9.5e-105 384.4 364 58.2
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 4.7e-104 382.1 359 55.4
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 6.2e-104 381.7 359 57.4
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 6.2e-104 381.7 369 56.9
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 2.3e-103 379.8 345 59.7
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 4.0e-103 379.0 345 59.1
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.2e-103 378.6 367 56.9
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 6.8e-103 378.3 345 59.4
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 7.5e-102 374.8 364 54.4
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 7.5e-102 374.8 388 53.1
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 6.0e-99 365.2 345 56.8
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 2.3e-98 363.2 370 55.1
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 6.6e-98 361.7 347 57.1
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 8.6e-98 361.3 363 54.8
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 1.1e-97 360.9 368 54.3
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 2.1e-96 356.7 340 55.9
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 2.6e-94 349.7 366 52.5
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 5.6e-89 332.0 363 49.9
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 5.6e-89 332.0 350 52.9
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 6.2e-88 328.6 362 50.3
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 3.1e-87 326.2 342 52.6
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 4.4e-86 322.4 234 66.7
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 4.4e-86 322.4 377 51.7
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 4.2e-84 315.8 233 66.1
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 1.2e-83 314.3 366 49.2
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 1.7e-82 310.5 361 48.5
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 2.2e-77 293.5 312 53.2
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 1.9e-73 280.4 281 50.9
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 4.9e-69 265.8 359 42.1
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 2.1e-67 260.4 164 73.8
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 7.9e-59 231.9 238 55.5
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 5.3e-55 219.2 386 35.5
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 2.6e-54 216.9 244 50.4
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 1.9e-52 210.7 144 74.3
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 3.2e-52 209.9 228 53.1
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 2.8e-48 196.8 218 49.5
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 8.2e-48 195.3 251 45.0
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 1.2e-46 191.4 139 64.7
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 1.1e-44 184.9 395 33.7
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.7e-43 180.3 119 70.6
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 6.1e-43 179.1 226 45.6
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.8e-42 175.3 222 46.8
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.8e-39 167.5 225 46.2
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.0e-38 164.1 225 45.3
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 3.9e-34 149.8 165 46.7
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.3e-25 120.2 221 38.5
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.2e-24 115.5 64 84.4
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.0e-21 108.6 64 78.1
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.2e-17 95.1 64 71.9
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 2.7e-14 84.0 139 39.6
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 2.7e-14 84.0 157 33.1
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 3.2e-12 77.0 69 55.1
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 9.5e-12 75.5 52 65.4
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 4.7e-11 73.2 53 66.0
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 4.7e-11 73.2 53 66.0
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 4.7e-11 73.2 53 66.0
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 8.0e-11 72.4 55 63.6
Zm00001eb021100 Zea mays HOM05D002913 ORTHO05D026003 2.0e-06 57.8 49 59.2
Zm00001eb156390 Zea mays HOM05D009386 ORTHO05D011419 2.0e-06 57.8 49 59.2
Zm00001eb343430 Zea mays HOM05D002913 ORTHO05D020952 2.0e-06 57.8 49 59.2
Zm00001eb354900 Zea mays HOM05D002913 ORTHO05D026003 2.0e-06 57.8 49 59.2


User provided reference genes

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