Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 5.4e-75 284.3 146 100.0
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 4.9e-68 261.2 146 90.4
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 4.8e-47 191.4 146 71.2
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 7.9e-42 174.1 137 70.1
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 1.3e-41 173.3 118 74.6
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 1.3e-41 173.3 137 70.1
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 3.9e-41 171.8 137 69.3
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 3.9e-41 171.8 148 64.9
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 2.5e-40 169.1 148 63.5
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 3.3e-40 168.7 149 63.8
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 1.3e-39 166.8 149 65.1
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 2.2e-39 166.0 146 65.1
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 4.8e-39 164.9 147 62.6
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 8.2e-39 164.1 146 63.7
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 5.3e-38 161.4 136 64.0
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 3.4e-37 158.7 148 59.5
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 3.4e-37 158.7 146 63.0
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 4.5e-37 158.3 144 61.8
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 1.7e-36 156.4 143 61.5
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 2.2e-36 156.0 145 60.7
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 2.2e-36 156.0 142 57.0
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 2.9e-36 155.6 145 60.0
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 2.9e-36 155.6 139 61.9
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 2.9e-36 155.6 116 69.8
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 6.5e-36 154.5 142 64.1
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 1.4e-35 153.3 115 69.6
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 1.4e-35 153.3 142 63.4
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 3.2e-35 152.1 153 59.5
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 1.2e-34 150.2 138 61.6
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 1.6e-34 149.8 135 60.0
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 1.6e-34 149.8 150 59.3
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 2.7e-34 149.1 137 60.6
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 2.7e-34 149.1 144 59.7
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 6.1e-34 147.9 142 57.7
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 6.1e-34 147.9 146 55.5
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 1.1e-32 143.7 142 57.0
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 1.5e-32 143.3 150 56.0
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 2.5e-32 142.5 119 63.0
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 2.5e-32 142.5 146 58.2
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 5.7e-32 141.4 115 65.2
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 9.7e-32 140.6 153 56.9
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 9.7e-32 140.6 115 65.2
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 3.7e-31 138.7 136 56.6
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 3.7e-31 138.7 145 57.2
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 4.8e-31 138.3 120 65.0
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 4.8e-31 138.3 97 74.2
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 6.3e-31 137.9 137 59.1
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 6.3e-31 137.9 151 56.3
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 8.2e-31 137.5 102 70.6
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 8.2e-31 137.5 123 66.7
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 1.4e-30 136.7 141 53.2
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 1.4e-30 136.7 99 76.8
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 1.8e-30 136.3 136 58.1
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 4.1e-30 135.2 135 56.3
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 5.3e-30 134.8 150 56.7
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 6.9e-30 134.4 120 60.8
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 6.9e-30 134.4 122 60.7
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 6.9e-30 134.4 136 56.6
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 9.1e-30 134.0 136 58.8
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 1.2e-29 133.7 114 62.3
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 1.5e-29 133.3 111 65.8
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 1.5e-29 133.3 136 55.1
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 1.5e-29 133.3 105 68.6
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 2.0e-29 132.9 136 54.4
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 2.0e-29 132.9 128 60.2
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 2.6e-29 132.5 117 62.4
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 2.6e-29 132.5 103 68.0
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 5.9e-29 131.3 142 52.8
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 1.0e-28 130.6 118 62.7
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 1.3e-28 130.2 92 75.0
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 1.3e-28 130.2 144 53.5
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 1.7e-28 129.8 99 68.7
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 1.7e-28 129.8 144 54.2
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 2.2e-28 129.4 113 62.8
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 5.0e-28 128.3 119 60.5
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 5.0e-28 128.3 83 80.7
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 1.1e-27 127.1 118 61.0
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 1.4e-27 126.7 107 67.3
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 1.4e-27 126.7 145 53.1
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 1.9e-27 126.3 158 52.5
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 5.5e-27 124.8 114 60.5
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 9.4e-27 124.0 139 54.7
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 2.1e-26 122.9 151 51.0
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 2.7e-26 122.5 103 64.1
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 3.6e-26 122.1 156 48.7
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 3.6e-26 122.1 159 49.1
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 2.3e-25 119.4 84 77.4
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 3.9e-25 118.6 129 51.9
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 8.8e-25 117.5 84 72.6
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 2.6e-24 115.9 124 51.6
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 1.7e-23 113.2 114 55.3
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 6.3e-23 111.3 72 80.6
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 6.3e-23 111.3 107 57.0
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 1.4e-22 110.2 78 74.4
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 4.1e-22 108.6 74 78.4
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 4.1e-22 108.6 74 71.6
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 1.2e-21 107.1 108 54.6
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 1.7e-20 103.2 82 65.9
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 1.9e-19 99.8 113 51.3
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 2.3e-17 92.8 113 46.9
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 6.7e-17 91.3 87 50.6
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 1.1e-16 90.5 65 66.2
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 1.1e-16 90.5 70 67.1
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 3.3e-16 89.0 98 55.1
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 3.3e-16 89.0 108 45.4
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 9.7e-16 87.4 64 67.2
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 3.1e-14 82.4 49 81.6
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 4.5e-13 78.6 57 64.9
Dinv42771 Davidia involucrata HOM05D007179 ORTHO05D009124 1.2e-10 70.5 99 47.5
Zm00001eb184420 Zea mays HOM05D007179 ORTHO05D009124 4.1e-06 55.5 93 41.9


User provided reference genes

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