Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G174801 Populus trichocarpa HOM05D000876 ORTHO05D000285 9.4e-121 436.8 210 100.0
Potri.008G074066 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.1e-76 290.4 311 51.1
Potri.014G056100 Populus trichocarpa HOM05D000876 ORTHO05D000285 6.0e-75 284.6 257 58.0
Potri.010G022201 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.3e-69 266.9 235 61.3
Potri.001G370432 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.3e-61 240.4 291 47.8
Potri.006G116400 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.4e-54 215.3 304 41.1
Potri.014G061450 Populus trichocarpa HOM05D000876 ORTHO05D000285 8.4e-53 211.1 291 42.3
Potri.010G190650 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.7e-51 206.1 304 40.5
Potri.001G391600 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.1e-49 200.7 268 42.9
Potri.004G127420 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.1e-48 196.4 251 45.0
Potri.004G168200 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.5e-46 188.7 226 47.3
Potri.008G189300 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.2e-45 186.4 219 48.4
Potri.008G217500 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.2e-45 186.4 275 40.7
Potri.010G045701 Populus trichocarpa HOM05D000876 ORTHO05D000285 6.4e-45 184.9 219 49.3
Potri.001G339400 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.1e-44 184.1 300 37.3
Potri.015G137800 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.1e-43 179.9 292 37.3
Potri.001G243108 Populus trichocarpa HOM05D000876 ORTHO05D000285 6.0e-43 178.3 271 38.0
Potri.007G118701 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.9e-41 173.3 300 36.3
Potri.010G132850 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.5e-41 172.9 299 35.8
Potri.003G006700 Populus trichocarpa HOM05D000876 ORTHO05D000285 5.6e-41 171.8 299 35.5
Potri.014G026000 Populus trichocarpa HOM05D000876 ORTHO05D000285 7.4e-41 171.4 299 35.5
Potri.018G075600 Populus trichocarpa HOM05D000876 ORTHO05D000285 7.4e-41 171.4 299 35.8
Potri.008G196901 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.8e-40 169.5 296 35.1
Potri.001G299100 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.1e-39 167.5 301 34.6
Potri.001G402200 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.8e-39 166.8 302 34.8
Potri.003G192350 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.8e-39 166.8 301 34.2
Potri.004G230401 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.8e-39 166.8 301 34.2
Potri.007G062850 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.8e-39 166.8 301 34.2
Potri.013G144650 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.8e-39 166.8 301 34.2
Potri.014G091925 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.8e-39 166.8 301 34.2
Potri.017G062600 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.0e-39 165.6 244 41.8
Potri.019G061000 Populus trichocarpa HOM05D000876 ORTHO05D000285 5.3e-39 165.2 288 35.1
Potri.008G209401 Populus trichocarpa HOM05D000876 ORTHO05D000285 6.9e-39 164.9 279 35.1
Potri.005G135800 Populus trichocarpa HOM05D000876 ORTHO05D000285 9.0e-39 164.5 301 33.9
Potri.005G153700 Populus trichocarpa HOM05D000876 ORTHO05D000285 9.0e-39 164.5 301 34.2
Potri.001G238000 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.0e-37 161.0 294 35.4
Potri.008G176600 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.7e-35 152.9 296 33.8
Potri.001G256500 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.0e-34 151.0 233 39.5
Potri.002G200700 Populus trichocarpa HOM05D000876 ORTHO05D000285 8.7e-34 147.9 258 36.8
Potri.008G205550 Populus trichocarpa HOM05D000876 ORTHO05D000285 5.7e-33 145.2 179 44.7
Potri.006G149001 Populus trichocarpa HOM05D000876 ORTHO05D000285 3.7e-32 142.5 215 38.1
Potri.001G195601 Populus trichocarpa HOM05D000876 ORTHO05D000285 6.9e-31 138.3 244 36.5
Potri.010G018401 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.5e-30 137.1 209 37.3
Potri.001G182200 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.0e-29 134.4 249 35.3
Potri.001G297801 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.1e-28 131.0 213 37.1
Potri.018G054501 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.5e-28 129.8 259 34.4
Potri.015G064502 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.3e-25 119.0 132 45.5
Potri.017G072700 Populus trichocarpa HOM05D000876 ORTHO05D000285 7.4e-25 118.2 281 30.2
Potri.005G163200 Populus trichocarpa HOM05D000876 ORTHO05D000285 6.9e-23 111.7 261 30.3
Potri.013G071200 Populus trichocarpa HOM05D000876 ORTHO05D000285 3.4e-22 109.4 150 41.3
Potri.001G268908 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.5e-20 103.2 250 30.4
Potri.011G125150 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.1e-19 100.1 177 36.7
Potri.004G097601 Populus trichocarpa HOM05D000876 ORTHO05D000285 4.6e-19 99.0 170 35.9
Potri.015G012100 Populus trichocarpa HOM05D000876 ORTHO05D000285 2.3e-18 96.7 177 35.6
Potri.010G076000 Populus trichocarpa HOM05D000876 ORTHO05D000285 5.1e-18 95.5 306 26.8
Potri.011G094000 Populus trichocarpa HOM05D000876 ORTHO05D000285 3.3e-17 92.8 170 35.3
FAN17G2734 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.2e-14 84.3 242 27.7
DCAR_025172 Daucus carota HOM05D000876 ORTHO05D000285 5.9e-14 82.0 259 26.6
Atru.chr3.1562 Acer truncatum HOM05D000876 ORTHO05D000285 7.7e-14 81.6 291 24.1
Atru.chr3.1584 Acer truncatum HOM05D000876 ORTHO05D000285 7.7e-14 81.6 291 24.1
Atru.chr7.239 Acer truncatum HOM05D000034 ORTHO05D000037 2.9e-13 79.7 292 24.7
Potri.001G205601 Populus trichocarpa HOM05D000876 ORTHO05D000285 6.5e-13 78.6 143 35.7
RcHm_v2.0_Chr4g0428601 Rosa chinensis HOM05D000876 ORTHO05D000285 8.5e-13 78.2 285 26.3
Gorai.002G171500 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.2e-11 74.3 251 30.7
CANSAT11G0869 Cannabis sativa HOM05D000876 ORTHO05D000285 2.1e-11 73.6 196 30.6
CANSAT64G0985 Cannabis sativa HOM05D000876 ORTHO05D000285 2.1e-11 73.6 196 30.6
HPP92_027007 Vanilla planifolia HOM05D000876 ORTHO05D000285 2.7e-11 73.2 303 24.4
FAN05G0722 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.6e-11 72.8 177 31.6
CANSAT25G2261 Cannabis sativa HOM05D000876 ORTHO05D000285 4.7e-11 72.4 196 30.1
HPP92_015385 Vanilla planifolia HOM05D000876 ORTHO05D000285 4.7e-11 72.4 303 23.4
FAN17G2644 Fragaria x ananassa HOM05D000876 ORTHO05D000285 7.9e-11 71.6 278 24.8
FAN14G5489 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.0e-10 71.2 251 25.5
Potri.013G094950 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.0e-10 71.2 91 39.6
Potri.005G127650 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.8e-10 70.5 97 40.2
MD15G1314200 Malus domestica HOM05D000876 ORTHO05D000285 2.3e-10 70.1 283 24.0
CANSAT11G0810 Cannabis sativa HOM05D000876 ORTHO05D000285 5.1e-10 68.9 196 29.6
Prupe.5G020800 Prunus persica HOM05D000876 ORTHO05D000285 6.7e-10 68.6 288 25.3
Gorai.007G271200 Gossypium raimondii HOM05D000876 ORTHO05D000285 8.8e-10 68.2 233 30.5
arahy.Tifrunner.gnm1.ann1.NV9TN2 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.1e-09 67.8 276 24.3
CANSAT21G1745 Cannabis sativa HOM05D000876 ORTHO05D000285 1.1e-09 67.8 196 28.6
DCAR_026451 Daucus carota HOM05D000876 ORTHO05D000285 1.5e-09 67.4 200 30.0
CANSAT78G0895 Cannabis sativa HOM05D000876 ORTHO05D000285 2.6e-09 66.6 211 28.4
Gorai.002G171600 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.6e-09 66.6 269 28.3
Gorai.010G172100 Gossypium raimondii HOM05D000876 ORTHO05D000285 5.7e-09 65.5 256 27.7
Gorai.006G019900 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.7e-08 63.9 295 26.8
Gorai.012G070700 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.7e-08 63.9 297 26.3
Atru.chr3.2332 Acer truncatum HOM05D000034 ORTHO05D000037 2.2e-08 63.5 167 31.7
CANSAT21G2246 Cannabis sativa HOM05D000876 ORTHO05D000285 2.8e-08 63.2 196 28.1
QL04p079613 Quercus lobata HOM05D000876 ORTHO05D000285 1.1e-07 61.2 279 23.7
QL05p031161 Quercus lobata HOM05D000034 ORTHO05D000037 1.1e-07 61.2 282 24.5
arahy.Tifrunner.gnm1.ann1.D3784E Arachis hypogaea HOM05D000034 ORTHO05D000037 1.4e-07 60.8 224 25.4
CiPaw.10G065300 Carya illinoinensis HOM05D000876 ORTHO05D000285 1.4e-07 60.8 281 26.0
Ciclev10013387m.g Citrus clementina HOM05D000876 ORTHO05D034797 1.8e-07 60.5 186 29.0
Gorai.004G102900 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.4e-07 60.1 293 24.9
CANSAT78G1247 Cannabis sativa HOM05D000876 ORTHO05D000285 3.1e-07 59.7 184 27.7
FAN09G0603 Fragaria x ananassa HOM05D000876 ORTHO05D000285 3.1e-07 59.7 204 27.9
CANSAT56G2973 Cannabis sativa HOM05D000876 ORTHO05D000285 4.1e-07 59.3 184 27.2
CiPaw.15G017800 Carya illinoinensis HOM05D000876 ORTHO05D000285 4.1e-07 59.3 280 24.6
Prupe.5G207000 Prunus persica HOM05D000876 ORTHO05D000285 4.1e-07 59.3 190 29.5
TPR.G30704 Trifolium pratense HOM05D000876 ORTHO05D000285 4.1e-07 59.3 208 26.9
CiPaw.04G117800 Carya illinoinensis HOM05D000876 ORTHO05D000285 5.3e-07 58.9 292 22.6
Gorai.008G062400 Gossypium raimondii HOM05D000876 ORTHO05D000285 5.3e-07 58.9 297 26.3
HPP92_019445 Vanilla planifolia HOM05D000876 ORTHO05D000285 5.3e-07 58.9 208 27.4
Gorai.010G149000 Gossypium raimondii HOM05D000876 ORTHO05D000285 7.0e-07 58.5 209 30.1
CANSAT54G1231 Cannabis sativa HOM05D000876 ORTHO05D000285 9.1e-07 58.2 172 27.9
Glyma.18G191100 Glycine max HOM05D000876 ORTHO05D000285 1.2e-06 57.8 229 24.5
Potri.010G019001 Populus trichocarpa HOM05D000876 ORTHO05D000285 1.2e-06 57.8 32 75.0
Gorai.006G154000 Gossypium raimondii HOM05D000876 ORTHO05D000285 1.5e-06 57.4 273 26.0
FvH4_1g19130 Fragaria vesca HOM05D000876 ORTHO05D000285 2.6e-06 56.6 134 31.3
FAN05G3579 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.6e-06 56.6 164 29.9
Gorai.005G119800 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.6e-06 56.6 252 28.2
Gorai.010G124300 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.6e-06 56.6 237 27.4
Gorai.N004200 Gossypium raimondii HOM05D000876 ORTHO05D000285 2.6e-06 56.6 286 26.6
Prupe.1G173000 Prunus persica HOM05D000876 ORTHO05D000285 2.6e-06 56.6 215 26.0
Gorai.013G094800 Gossypium raimondii HOM05D000876 ORTHO05D000285 3.5e-06 56.2 280 26.1
Atru.chr11.998 Acer truncatum HOM05D000876 ORTHO05D000285 4.5e-06 55.8 188 26.6
CSS0024396 Camellia sinensis var. sinensis HOM05D021170 ORTHO05D000285 4.5e-06 55.8 216 24.5
FAN03G2155 Fragaria x ananassa HOM05D000876 ORTHO05D000285 4.5e-06 55.8 277 21.3
Gorai.007G232100 Gossypium raimondii HOM05D000876 ORTHO05D000285 4.5e-06 55.8 264 26.1
COL.COLO4_03464 Corchorus olitorius HOM05D000876 ORTHO05D000285 5.9e-06 55.5 267 24.3
FAN09G4256 Fragaria x ananassa HOM05D000876 ORTHO05D000285 5.9e-06 55.5 277 21.3
QL08p029247 Quercus lobata HOM05D013302 ORTHO05D015047 5.9e-06 55.5 190 26.8
Gorai.013G171200 Gossypium raimondii HOM05D000876 ORTHO05D000285 7.7e-06 55.1 295 25.1


User provided reference genes

Program Settings