Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G141800 Populus trichocarpa HOM05D006080 ORTHO05D007382 3.9e-126 456.1 546 100.0
Sabra06G0110900 Salix brachista HOM05D006080 ORTHO05D007382 6.2e-116 422.2 546 95.6
Manes.09G158700 Manihot esculenta HOM05D006080 ORTHO05D007382 4.8e-76 289.7 207 69.1
QL02p058222 Quercus lobata HOM05D006080 ORTHO05D007382 1.1e-59 235.3 217 58.1
TWI14G1385 Tripterygium wilfordii HOM05D006080 ORTHO05D007382 1.1e-59 235.3 209 58.9
QL93p0100_0628 Quercus lobata HOM05D006080 ORTHO05D007382 7.0e-59 232.6 217 57.6
Prupe.7G198600 Prunus persica HOM05D006080 ORTHO05D007382 6.5e-57 226.1 213 54.0
CiPaw.03G206100 Carya illinoinensis HOM05D006080 ORTHO05D007382 1.1e-56 225.3 213 55.4
Ciclev10007804m.g Citrus clementina HOM05D006080 ORTHO05D007382 1.1e-56 225.3 212 55.2
Thecc.09G076600 Theobroma cacao HOM05D006080 ORTHO05D007382 7.2e-56 222.6 218 55.0
MD02G1091700 Malus domestica HOM05D006080 ORTHO05D007382 4.0e-54 216.9 215 53.0
MD15G1217800 Malus domestica HOM05D006080 ORTHO05D007382 6.8e-54 216.1 212 53.3
Gorai.013G224200 Gossypium raimondii HOM05D006080 ORTHO05D007382 1.2e-53 215.3 218 53.7
Duzib187G1039 Durio zibethinus HOM05D006080 ORTHO05D007382 5.7e-53 213.0 216 53.7
Gohir.A13G190700 Gossypium hirsutum HOM05D006080 ORTHO05D007382 1.8e-51 208.0 218 52.3
Duzib168G1192 Durio zibethinus HOM05D006080 ORTHO05D007382 4.1e-51 206.8 218 52.3
COL.COLO4_18095 Corchorus olitorius HOM05D006080 ORTHO05D007382 7.8e-50 202.6 220 51.8
Gorai.009G035900 Gossypium raimondii HOM05D006080 ORTHO05D007382 1.3e-49 201.8 218 50.0
Sed0020593 Sechium edule HOM05D006080 ORTHO05D007382 2.3e-49 201.1 212 50.0
Atru.chr7.1705 Acer truncatum HOM05D006080 ORTHO05D007382 2.9e-49 200.7 198 50.5
SHI30075 Sapria himalayana HOM05D006080 ORTHO05D007382 1.5e-48 198.4 203 48.8
Lj4g0003679 Lotus japonicus HOM05D006080 ORTHO05D007382 1.5e-45 188.3 214 49.5
Nn7g36733 Nelumbo nucifera HOM05D006080 ORTHO05D007382 3.4e-45 187.2 198 49.0
FAN04G2899 Fragaria x ananassa HOM05D006080 ORTHO05D007382 7.5e-45 186.0 204 49.5
Cpa.g.sc28.32 Carica papaya HOM05D006080 ORTHO05D007382 1.2e-42 178.7 158 61.4
Glyma.17G049100 Glycine max HOM05D006080 ORTHO05D007382 1.2e-42 178.7 171 52.0
Lalb_Chr23g0276361 Lupinus albus HOM05D006080 ORTHO05D007382 3.5e-42 177.2 175 48.6
arahy.Tifrunner.gnm1.ann1.YW7MJY Arachis hypogaea HOM05D006080 ORTHO05D007382 6.0e-42 176.4 211 45.0
Cfa002986 Carpinus fangiana HOM05D006080 ORTHO05D007382 7.8e-42 176.0 151 60.3
Haze_26015 Corylus avellana HOM05D006080 ORTHO05D007382 1.7e-41 174.9 151 59.6
Lalb_Chr07g0181201 Lupinus albus HOM05D006080 ORTHO05D007382 5.0e-41 173.3 190 46.3
CSS0013189 Camellia sinensis var. sinensis HOM05D006080 ORTHO05D007382 1.1e-40 172.2 168 54.2
CSS0013911 Camellia sinensis var. sinensis HOM05D006080 ORTHO05D007382 1.1e-40 172.2 168 54.2
Phvul.009G021500 Phaseolus vulgaris HOM05D006080 ORTHO05D007382 1.1e-40 172.2 176 47.2
C07p09380 Brassica napus HOM05D006080 ORTHO05D007382 3.3e-40 170.6 205 46.3
BolC7t41361H Brassica oleracea HOM05D006080 ORTHO05D007382 3.3e-40 170.6 205 46.3
PGR142G0728 Punica granatum HOM05D006080 ORTHO05D007382 4.3e-40 170.2 220 44.1
Rhsim12G0001600 Rhododendron simsii HOM05D006080 ORTHO05D007382 4.3e-40 170.2 178 50.6
Thhalv10002477m.g Eutrema salsugineum HOM05D006080 ORTHO05D007382 7.3e-40 169.5 208 47.1
Rhsim04G0100300 Rhododendron simsii HOM05D006080 ORTHO05D007382 9.5e-40 169.1 177 52.0
Sc14g0000540 Simmondsia chinensis HOM05D006080 ORTHO05D007382 9.5e-40 169.1 218 44.5
BcaC06g35949 Brassica carinata HOM05D006080 ORTHO05D007382 1.6e-39 168.3 205 45.9
CANSAT56G0731 Cannabis sativa HOM05D006080 ORTHO05D007382 1.6e-39 168.3 148 59.5
Sc08g0008900 Simmondsia chinensis HOM05D006080 ORTHO05D007382 1.6e-39 168.3 213 42.7
Hund19654 Selenicereus undatus HOM05D006080 ORTHO05D007382 2.1e-39 167.9 223 43.9
TWI59G0376 Tripterygium wilfordii HOM05D006080 ORTHO05D007382 3.6e-39 167.2 144 54.9
Glyma.04G019000 Glycine max HOM05D006080 ORTHO05D007382 4.7e-39 166.8 175 44.6
AUR62044025 Chenopodium quinoa HOM05D006080 ORTHO05D007382 8.0e-39 166.0 218 45.4
Phvul.009G114250 Phaseolus vulgaris HOM05D006080 ORTHO05D007382 1.1e-38 165.6 177 46.9
Phvul.011G177400 Phaseolus vulgaris HOM05D006080 ORTHO05D007382 3.1e-38 164.1 177 46.3
AL3G43560 Arabidopsis lyrata HOM05D006080 ORTHO05D007382 4.0e-38 163.7 202 47.0
AT2G06000 Arabidopsis thaliana HOM05D006080 ORTHO05D007382 4.0e-38 163.7 202 47.0
vmacro00920 Vaccinium macrocarpon HOM05D006080 ORTHO05D007382 1.5e-37 161.8 183 49.7
ClCG11G001430 Citrullus lanatus HOM05D006080 ORTHO05D007382 2.6e-37 161.0 144 56.2
A07p06330 Brassica napus HOM05D006080 ORTHO05D007382 3.4e-37 160.6 179 48.6
CARHR103620 Cardamine hirsuta HOM05D006080 ORTHO05D007382 3.4e-37 160.6 202 45.5
BcaB06g26878 Brassica carinata HOM05D006080 ORTHO05D007382 4.4e-37 160.2 205 43.4
VMungo1215G0155 Vigna mungo HOM05D006080 ORTHO05D007382 5.8e-37 159.8 213 42.3
BraA07t28425Z Brassica rapa HOM05D006080 ORTHO05D007382 7.5e-37 159.5 179 47.5
THA.LOC104815335 Tarenaya hassleriana HOM05D006080 ORTHO05D007382 7.5e-37 159.5 201 44.3
VMungo1309G1452 Vigna mungo HOM05D006080 ORTHO05D007382 7.5e-37 159.5 176 43.2
THA.LOC104808885 Tarenaya hassleriana HOM05D006080 ORTHO05D007382 9.8e-37 159.1 209 45.5
AUR62003304 Chenopodium quinoa HOM05D006080 ORTHO05D007382 1.3e-36 158.7 217 44.7
Psat1g133120 Pisum sativum HOM05D006080 ORTHO05D007382 1.3e-36 158.7 177 45.2
Sp3g24500 Schrenkiella parvula HOM05D006080 ORTHO05D007382 1.3e-36 158.7 204 45.6
Carub.0003s2711 Capsella rubella HOM05D006080 ORTHO05D007382 2.2e-36 157.9 203 44.8
TPR.G27762 Trifolium pratense HOM05D006080 ORTHO05D007382 2.2e-36 157.9 177 43.5
MELO3C004654.2 Cucumis melo HOM05D006080 ORTHO05D007382 6.4e-36 156.4 148 52.7
CsaV3_2G001150 Cucumis sativus L. HOM05D006080 ORTHO05D007382 8.3e-36 156.0 149 52.3
Glyma.06G019300 Glycine max HOM05D006080 ORTHO05D007382 1.1e-35 155.6 176 42.6
Aqoxy5G04299 Aquilegia oxysepala HOM05D006080 ORTHO05D007382 1.4e-35 155.2 202 42.6
Aa31sc481G20 Aethionema arabicum HOM05D006080 ORTHO05D007382 1.9e-35 154.8 201 43.8
TAR383G0956 Trochodendron aralioides HOM05D006080 ORTHO05D007382 2.4e-35 154.5 146 54.8
RcHm_v2.0_Chr7g0227901 Rosa chinensis HOM05D006080 ORTHO05D007382 4.1e-35 153.7 144 53.5
FvH4_5g31880 Fragaria vesca HOM05D006080 ORTHO05D007382 9.2e-35 152.5 146 52.7
FAN08G1188 Fragaria x ananassa HOM05D006080 ORTHO05D007382 1.6e-34 151.8 150 52.7
CSS0008787 Camellia sinensis var. sinensis HOM05D006080 ORTHO05D007382 2.7e-34 151.0 181 49.7
Lj6g0017816 Lotus japonicus HOM05D006080 ORTHO05D007382 2.7e-34 151.0 176 44.3
Dinv24252 Davidia involucrata HOM05D006080 ORTHO05D007382 6.0e-34 149.8 200 44.5
FAN18G2998 Fragaria x ananassa HOM05D006080 ORTHO05D007382 7.8e-34 149.4 146 52.1
Medtr2g041700 Medicago truncatula HOM05D006080 ORTHO05D007382 1.3e-33 148.7 182 42.3
TPR.G30187 Trifolium pratense HOM05D006080 ORTHO05D007382 3.9e-33 147.1 175 42.9
Lj9C313T10 Lonicera japonica HOM05D006080 ORTHO05D007382 2.5e-32 144.4 210 42.9
arahy.Tifrunner.gnm1.ann1.3R1N4J Arachis hypogaea HOM05D006080 ORTHO05D007382 2.8e-31 141.0 147 48.3
Ah.07g204920 Amaranthus hybridus HOM05D002607 ORTHO05D008816 1.8e-30 138.3 178 41.0
Actinidia00227 Actinidia chinensis HOM05D006080 ORTHO05D007382 5.2e-30 136.7 133 51.9
Oeu000645.1 Olea europaea HOM05D006080 ORTHO05D007382 8.9e-30 136.0 204 39.2
Sopen01g047140 Solanum pennellii HOM05D006080 ORTHO05D007382 8.9e-30 136.0 215 42.8
Solyc01g104630.3 Solanum lycopersicum HOM05D006080 ORTHO05D007382 2.6e-29 134.4 216 41.7
PGSC0003DMG401029758 Solanum tuberosum HOM05D006080 ORTHO05D007382 2.6e-29 134.4 216 41.7
SalBow5G4726 Salvia bowleyana HOM05D006080 ORTHO05D007382 3.4e-29 134.0 214 42.1
MBI19_g16224_MAGBIO Magnolia biondii HOM05D006080 ORTHO05D007382 5.8e-29 133.3 191 39.8
SalBow5G2015 Salvia bowleyana HOM05D006080 ORTHO05D007382 7.5e-29 132.9 214 42.1
CAN.G1702.1 Capsicum annuum HOM05D006080 ORTHO05D007382 1.3e-28 132.1 215 40.5
Migut.B00654 Erythranthe guttata HOM05D006080 ORTHO05D007382 1.7e-28 131.7 204 39.2
CDE02G4345 Ceratophyllum demersum HOM05D006080 ORTHO05D007382 2.9e-28 131.0 174 40.8
AUR62016281 Chenopodium quinoa HOM05D006080 ORTHO05D007382 6.4e-28 129.8 145 46.9
Atru.BG.18.p Acer truncatum HOM05D006080 ORTHO05D007382 1.4e-27 128.6 98 61.2
MSTRG.16549 Avicennia marina HOM05D006080 ORTHO05D007382 4.1e-27 127.1 199 41.2
Nitab4.5_0000249g0340 Nicotiana tabacum HOM05D006080 ORTHO05D007382 7.1e-27 126.3 216 42.1
DCAR_029235 Daucus carota HOM05D006080 ORTHO05D007382 3.5e-26 124.0 185 42.7
Medtr4g040410 Medicago truncatula HOM05D006080 ORTHO05D007382 3.5e-26 124.0 148 42.6
Ca_02204_v3 Cicer arietinum L. HOM05D006080 ORTHO05D007382 1.0e-25 122.5 133 45.9
SGA_v2.0_scaffold332G48925 Striga asiatica HOM05D006080 ORTHO05D007382 3.0e-25 120.9 196 37.2
HanXRQChr05g0146121 Helianthus annuus HOM05D006080 ORTHO05D007382 2.5e-24 117.9 170 41.2
Nitab4.5_0009570g0010 Nicotiana tabacum HOM05D006080 ORTHO05D007382 5.6e-24 116.7 216 40.3
SalBow6G3562 Salvia bowleyana HOM05D006080 ORTHO05D007382 1.4e-22 112.1 196 36.7
SalBow6G5833 Salvia bowleyana HOM05D006080 ORTHO05D007382 1.4e-22 112.1 196 36.7
Lsat_1_v5_gn_2_12120 Lactuca sativa HOM05D006080 ORTHO05D007382 1.8e-22 111.7 182 36.3
CDE06G1744 Ceratophyllum demersum HOM05D000591 ORTHO05D000579 6.8e-22 109.8 174 36.2
HanXRQChr10g0292001 Helianthus annuus HOM05D006080 ORTHO05D007382 6.8e-22 109.8 163 42.9
Cc02_g22120 Coffea canephora HOM05D006080 ORTHO05D007382 1.2e-21 109.0 141 42.6
Gohir.D13G196370 Gossypium hirsutum HOM05D006080 ORTHO05D007382 2.9e-20 104.4 95 51.6
Eucgr.C00814 Eucalyptus grandis HOM05D006080 ORTHO05D007382 1.1e-19 102.4 103 47.6
ATR0598G196 Amborella trichopoda HOM05D006080 ORTHO05D007382 9.2e-19 99.4 125 39.2
ECA238G3807 Erigeron canadensis HOM05D006080 ORTHO05D007382 2.4e-14 84.7 142 39.4
Eucgr.C00807 Eucalyptus grandis HOM05D006080 ORTHO05D007382 4.3e-08 63.9 50 64.0
Gohir.A05G033900 Gossypium hirsutum HOM05D006080 ORTHO05D007382 9.6e-08 62.8 55 52.7
Peaxi162Scf01290g00029 Petunia axillaris HOM05D006080 ORTHO05D007382 9.6e-08 62.8 102 39.2
Gohir.D05G035300 Gossypium hirsutum HOM05D006080 ORTHO05D007382 1.6e-07 62.0 55 52.7
Psat7g154760 Pisum sativum HOM05D006080 ORTHO05D007382 4.8e-07 60.5 65 47.7
Atru.chr7.1704 Acer truncatum HOM05D006080 ORTHO05D007382 4.0e-06 57.4 48 62.5


User provided reference genes

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