Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G137401 Populus trichocarpa HOM05D007531 ORTHO05D009484 9.1e-47 189.9 95 100.0
Sabra06G0107500 Salix brachista HOM05D007531 ORTHO05D009484 1.5e-33 146.0 163 53.4
Manes.16G092000 Manihot esculenta HOM05D007531 ORTHO05D009484 1.2e-27 126.3 86 70.9
Manes.03G043400 Manihot esculenta HOM05D007531 ORTHO05D009484 6.1e-27 124.0 98 66.3
Thecc.09G071300 Theobroma cacao HOM05D007531 ORTHO05D009484 9.7e-25 116.7 101 65.3
Cpa.g.sc82.75 Carica papaya HOM05D007531 ORTHO05D009484 2.8e-24 115.2 103 60.2
TWI63G1700 Tripterygium wilfordii HOM05D007531 ORTHO05D009484 2.8e-24 115.2 99 60.6
Duzib168G1872 Durio zibethinus HOM05D007531 ORTHO05D009484 3.7e-24 114.8 100 63.0
Duzib150G1567 Durio zibethinus HOM05D007531 ORTHO05D009484 1.1e-23 113.2 104 60.6
GSVIVG01015026001 Vitis vinifera HOM05D007531 ORTHO05D009484 1.1e-23 113.2 95 63.2
PGR042G0735 Punica granatum HOM05D007531 ORTHO05D009484 1.4e-23 112.8 101 60.4
Atru.chr7.1757 Acer truncatum HOM05D007531 ORTHO05D009484 2.4e-23 112.1 98 61.2
Dinv42427 Davidia involucrata HOM05D007531 ORTHO05D009484 2.4e-23 112.1 98 61.2
CANSAT56G3767 Cannabis sativa HOM05D007531 ORTHO05D009484 4.1e-23 111.3 96 59.4
CSS0023587 Camellia sinensis var. sinensis HOM05D007531 ORTHO05D009484 5.9e-22 107.5 98 63.3
Prupe.7G193100 Prunus persica HOM05D007531 ORTHO05D009484 5.9e-22 107.5 102 54.9
MD15G1222700 Malus domestica HOM05D007531 ORTHO05D009484 1.0e-21 106.7 98 56.1
SGA_v2.0_scaffold296G47570 Striga asiatica HOM05D007531 ORTHO05D009484 5.0e-21 104.4 86 61.6
Gorai.004G285500 Gossypium raimondii HOM05D007531 ORTHO05D009484 6.5e-21 104.0 102 56.9
Gohir.A08G246700 Gossypium hirsutum HOM05D007531 ORTHO05D009484 8.5e-21 103.6 102 57.8
Gohir.D08G267900 Gossypium hirsutum HOM05D007531 ORTHO05D009484 4.2e-20 101.3 99 53.5
Nitab4.5_0007540g0040 Nicotiana tabacum HOM05D007531 ORTHO05D009484 4.2e-20 101.3 98 57.1
Nitab4.5_0001092g0060 Nicotiana tabacum HOM05D007531 ORTHO05D009484 7.2e-20 100.5 100 54.0
Sp1g17150 Schrenkiella parvula HOM05D007531 ORTHO05D009484 1.2e-19 99.8 103 57.3
THA.LOC104809045 Tarenaya hassleriana HOM05D007531 ORTHO05D009484 1.2e-19 99.8 101 54.5
COL.COLO4_21218 Corchorus olitorius HOM05D007531 ORTHO05D009484 1.6e-19 99.4 107 55.1
Nitab4.5_0001699g0060 Nicotiana tabacum HOM05D007531 ORTHO05D009484 1.6e-19 99.4 98 55.1
Carub.0001s1884 Capsella rubella HOM05D007531 ORTHO05D009484 2.7e-19 98.6 105 54.3
Lsat_1_v5_gn_7_35440 Lactuca sativa HOM05D007531 ORTHO05D009484 3.6e-19 98.2 100 54.0
Aa31LG7G3950 Aethionema arabicum HOM05D007531 ORTHO05D009484 4.7e-19 97.8 102 54.9
Sopen07g022090 Solanum pennellii HOM05D007531 ORTHO05D009484 4.7e-19 97.8 97 58.8
TAR626G0337 Trochodendron aralioides HOM05D007531 ORTHO05D009484 4.7e-19 97.8 98 55.1
ClCG11G000070 Citrullus lanatus HOM05D007531 ORTHO05D009484 1.0e-18 96.7 84 59.5
Thhalv10009175m.g Eutrema salsugineum HOM05D007531 ORTHO05D009484 1.0e-18 96.7 103 53.4
Solyc07g042450.3 Solanum lycopersicum HOM05D007531 ORTHO05D009484 1.4e-18 96.3 97 57.7
AL1G31820 Arabidopsis lyrata HOM05D007531 ORTHO05D009484 1.8e-18 95.9 105 53.3
Sc14g0000480 Simmondsia chinensis HOM05D007531 ORTHO05D009484 1.8e-18 95.9 64 71.9
FAN23G0531 Fragaria x ananassa HOM05D007531 ORTHO05D009484 2.3e-18 95.5 66 69.7
Rhsim05G0002900 Rhododendron simsii HOM05D007531 ORTHO05D009484 2.3e-18 95.5 57 75.4
RcHm_v2.0_Chr2g0095821 Rosa chinensis HOM05D007531 ORTHO05D009484 3.0e-18 95.1 66 68.2
FAN26G1659 Fragaria x ananassa HOM05D007531 ORTHO05D009484 5.2e-18 94.4 66 68.2
FAN26G1806 Fragaria x ananassa HOM05D007531 ORTHO05D009484 5.2e-18 94.4 66 68.2
FvH4_1g09260 Fragaria vesca HOM05D007531 ORTHO05D009484 6.8e-18 94.0 66 66.7
FAN19G1112 Fragaria x ananassa HOM05D007531 ORTHO05D009484 6.8e-18 94.0 66 66.7
MSTRG.19432 Avicennia marina HOM05D007531 ORTHO05D009484 8.8e-18 93.6 107 56.1
Migut.L01591 Erythranthe guttata HOM05D007531 ORTHO05D009484 8.8e-18 93.6 75 60.0
PGSC0003DMG400013576 Solanum tuberosum HOM05D007531 ORTHO05D009484 1.2e-17 93.2 101 54.5
Ciclev10010006m.g Citrus clementina HOM05D007531 ORTHO05D009484 1.5e-17 92.8 104 50.0
QL11p002692 Quercus lobata HOM05D007531 ORTHO05D009484 2.0e-17 92.4 66 66.7
CAN.G660.22 Capsicum annuum HOM05D007531 ORTHO05D009484 3.4e-17 91.7 96 52.1
Cfa002948 Carpinus fangiana HOM05D007531 ORTHO05D009484 3.4e-17 91.7 106 50.9
Dinv25515 Davidia involucrata HOM05D007531 ORTHO05D009484 3.4e-17 91.7 88 56.8
Oeu028116.1 Olea europaea HOM05D007531 ORTHO05D009484 3.4e-17 91.7 106 50.0
CsaV3_5G027570 Cucumis sativus L. HOM05D007531 ORTHO05D009484 5.7e-17 90.9 82 56.1
ECA246G1013 Erigeron canadensis HOM05D007531 ORTHO05D009484 5.7e-17 90.9 64 65.6
Actinidia39623 Actinidia chinensis HOM05D007531 ORTHO05D009484 7.5e-17 90.5 96 53.1
Eucgr.H05011 Eucalyptus grandis HOM05D007531 ORTHO05D009484 1.3e-16 89.7 95 53.7
AT1G19240 Arabidopsis thaliana HOM05D007531 ORTHO05D009484 2.2e-16 89.0 106 50.9
BcaB07g31940 Brassica carinata HOM05D007531 ORTHO05D009484 2.8e-16 88.6 103 48.5
BcaC07g38992 Brassica carinata HOM05D007531 ORTHO05D009484 2.8e-16 88.6 103 48.5
Aqoxy7G04136 Aquilegia oxysepala HOM05D007531 ORTHO05D009484 3.7e-16 88.2 99 50.5
SalBow6G4078 Salvia bowleyana HOM05D007531 ORTHO05D009484 3.7e-16 88.2 72 56.9
DCAR_010491 Daucus carota HOM05D007531 ORTHO05D009484 8.3e-16 87.0 57 70.2
Hma1.2p1_0519F.1_g171380 Hydrangea macrophylla HOM05D007531 ORTHO05D009484 8.3e-16 87.0 55 72.7
EL10Ac8g18992 Beta vulgaris HOM05D007531 ORTHO05D009484 1.4e-15 86.3 64 67.2
unitig_578.g16405 Utricularia gibba HOM05D007531 ORTHO05D009484 1.4e-15 86.3 93 53.8
HPP92_021129 Vanilla planifolia HOM05D007531 ORTHO05D009484 1.8e-15 85.9 59 64.4
HPP92_021130 Vanilla planifolia HOM05D007531 ORTHO05D009484 1.8e-15 85.9 59 64.4
CDE06G0851 Ceratophyllum demersum HOM05D007531 ORTHO05D009484 2.4e-15 85.5 57 66.7
arahy.Tifrunner.gnm1.ann1.ETL5CI Arachis hypogaea HOM05D007531 ORTHO05D009484 9.1e-15 83.6 80 51.2
arahy.Tifrunner.gnm1.ann1.J82KAY Arachis hypogaea HOM05D007531 ORTHO05D009484 9.1e-15 83.6 80 51.2
Peaxi162Scf00191g01018 Petunia axillaris HOM05D007531 ORTHO05D009484 1.6e-14 82.8 99 49.5
Cc06_g12620 Coffea canephora HOM05D007531 ORTHO05D009484 2.0e-14 82.4 77 57.1
C05p17640 Brassica napus HOM05D007531 ORTHO05D009484 4.5e-14 81.3 57 66.7
BolC5t30467H Brassica oleracea HOM05D007531 ORTHO05D009484 4.5e-14 81.3 57 66.7
A06p15390 Brassica napus HOM05D007531 ORTHO05D009484 1.0e-13 80.1 57 64.9
BraA06t24652Z Brassica rapa HOM05D007531 ORTHO05D009484 1.0e-13 80.1 57 64.9
Lj4g0024105 Lotus japonicus HOM05D007531 ORTHO05D009484 1.0e-13 80.1 85 51.8
CARHR019840 Cardamine hirsuta HOM05D007531 ORTHO05D009484 1.3e-13 79.7 43 79.1
MBI19_g38003_MAGBIO Magnolia biondii HOM05D007531 ORTHO05D009484 1.7e-13 79.3 56 60.7
Psat0s2373g0160 Pisum sativum HOM05D007531 ORTHO05D009484 1.7e-13 79.3 73 53.4
Lalb_Chr11g0074031 Lupinus albus HOM05D007531 ORTHO05D009484 2.3e-13 79.0 90 44.4
vmacro17085 Vaccinium macrocarpon HOM05D007531 ORTHO05D009484 6.5e-13 77.4 46 73.9
Medtr4g124770 Medicago truncatula HOM05D007531 ORTHO05D009484 1.1e-12 76.6 53 62.3
TPR.G12718 Trifolium pratense HOM05D007531 ORTHO05D009484 2.5e-12 75.5 53 64.2
Phvul.004G046500 Phaseolus vulgaris HOM05D007531 ORTHO05D009484 7.2e-12 73.9 55 60.0
FAN28G0689 Fragaria x ananassa HOM05D007531 ORTHO05D009484 1.2e-11 73.2 66 60.6
Glyma.17G046400 Glycine max HOM05D007531 ORTHO05D009484 1.4e-10 69.7 48 64.6
Os01g0144700 Oryza sativa ssp. japonica HOM05D007531 ORTHO05D009484 1.4e-10 69.7 77 42.9
Phvul.003G128000 Phaseolus vulgaris HOM05D007531 ORTHO05D009484 5.2e-10 67.8 51 60.8
Glyma.13G113300 Glycine max HOM05D007531 ORTHO05D009484 6.8e-10 67.4 48 64.6
Sed0019513 Sechium edule HOM05D007531 ORTHO05D009484 5.7e-09 64.3 43 65.1
VMungo1215G2546 Vigna mungo HOM05D007531 ORTHO05D009484 2.8e-08 62.0 42 61.9


User provided reference genes

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