Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G136500 Populus trichocarpa HOM05D005951 ORTHO05D007025 3.3e-130 468.4 236 100.0
Sabra06G0106700 Salix brachista HOM05D005951 ORTHO05D007025 1.7e-126 456.1 236 96.6
Potri.018G063600 Populus trichocarpa HOM05D005951 ORTHO05D007025 2.4e-120 435.6 239 91.2
CSS0032580 Camellia sinensis var. sinensis HOM05D005951 ORTHO05D007025 7.6e-119 430.6 236 90.3
Cpa.g.sc82.63 Carica papaya HOM05D005951 ORTHO05D007025 7.6e-119 430.6 238 90.8
TAR383G1060 Trochodendron aralioides HOM05D005951 ORTHO05D007025 3.8e-118 428.3 236 91.1
Duzib168G0975 Durio zibethinus HOM05D005951 ORTHO05D007025 6.4e-118 427.6 236 90.7
QL11p002956 Quercus lobata HOM05D005951 ORTHO05D007025 7.1e-117 424.1 235 90.2
Gorai.009G038100 Gossypium raimondii HOM05D005951 ORTHO05D007025 1.2e-116 423.3 236 89.4
Manes.16G090500 Manihot esculenta HOM05D005951 ORTHO05D007025 2.1e-116 422.5 240 88.3
Manes.03G044600 Manihot esculenta HOM05D005951 ORTHO05D007025 2.7e-116 422.2 236 88.6
Atru.chr7.1767 Acer truncatum HOM05D005951 ORTHO05D007025 7.8e-116 420.6 236 89.0
Thecc.09G070300 Theobroma cacao HOM05D005951 ORTHO05D007025 1.3e-115 419.9 236 88.6
Dinv25506 Davidia involucrata HOM05D005951 ORTHO05D007025 2.3e-115 419.1 238 89.1
Gohir.D05G037600 Gossypium hirsutum HOM05D005951 ORTHO05D007025 3.0e-115 418.7 236 89.0
Duzib150G0422 Durio zibethinus HOM05D005951 ORTHO05D007025 3.9e-115 418.3 236 88.6
Gohir.A05G036100 Gossypium hirsutum HOM05D005951 ORTHO05D007025 5.1e-115 417.9 244 86.9
CiPaw.03G200400 Carya illinoinensis HOM05D005951 ORTHO05D007025 1.1e-114 416.8 236 88.6
Aqoxy7G04154 Aquilegia oxysepala HOM05D005951 ORTHO05D007025 2.5e-114 415.6 236 89.0
TWI34G0930 Tripterygium wilfordii HOM05D005951 ORTHO05D007025 7.3e-114 414.1 236 86.0
GSVIVG01015014001 Vitis vinifera HOM05D005951 ORTHO05D007025 1.3e-113 413.3 219 92.7
CiPaw.04G140200 Carya illinoinensis HOM05D005951 ORTHO05D007025 1.6e-113 412.9 236 87.3
Nn6g35632 Nelumbo nucifera HOM05D005951 ORTHO05D007025 3.6e-113 411.8 236 87.3
RcHm_v2.0_Chr2g0095941 Rosa chinensis HOM05D005951 ORTHO05D007025 1.1e-112 410.2 241 84.2
Cfa002937 Carpinus fangiana HOM05D005951 ORTHO05D007025 1.4e-112 409.8 236 88.6
MD02G1102200 Malus domestica HOM05D005951 ORTHO05D007025 1.4e-112 409.8 232 87.1
Actinidia39617 Actinidia chinensis HOM05D005951 ORTHO05D007025 5.3e-112 407.9 232 87.9
ClCG03G014750 Citrullus lanatus HOM05D005951 ORTHO05D007025 5.3e-112 407.9 236 85.6
FvH4_1g09390 Fragaria vesca HOM05D005951 ORTHO05D007025 5.3e-112 407.9 226 88.9
FAN19G2090 Fragaria x ananassa HOM05D005951 ORTHO05D007025 5.3e-112 407.9 226 88.9
FAN28G0037 Fragaria x ananassa HOM05D005951 ORTHO05D007025 6.9e-112 407.5 226 88.5
FAN28G0822 Fragaria x ananassa HOM05D005951 ORTHO05D007025 6.9e-112 407.5 226 88.5
FAN26G0600 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.5e-111 406.4 226 88.5
FAN26G2189 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.5e-111 406.4 226 88.1
CANSAT56G0193 Cannabis sativa HOM05D005951 ORTHO05D007025 3.4e-111 405.2 239 84.9
Ca_21339_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002721 3.4e-111 405.2 236 85.2
COL.COLO4_21208 Corchorus olitorius HOM05D005951 ORTHO05D007025 4.4e-111 404.8 236 86.9
Sed0027227 Sechium edule HOM05D005951 ORTHO05D007025 4.4e-111 404.8 236 85.2
CANSAT56G0116 Cannabis sativa HOM05D005951 ORTHO05D007025 2.2e-110 402.5 239 84.5
Glyma.17G045500 Glycine max HOM05D005951 ORTHO05D007025 2.2e-110 402.5 236 84.3
Lj4g0000458 Lotus japonicus HOM05D005951 ORTHO05D007025 2.2e-110 402.5 236 84.3
Nitab4.5_0000170g0090 Nicotiana tabacum HOM05D005951 ORTHO05D007025 2.2e-110 402.5 236 83.9
VMungo1215G3086 Vigna mungo HOM05D005951 ORTHO05D007025 2.2e-110 402.5 236 84.7
arahy.Tifrunner.gnm1.ann1.7AU96Q Arachis hypogaea HOM05D005951 ORTHO05D007025 6.4e-110 401.0 232 84.5
Prupe.7G192100 Prunus persica HOM05D005951 ORTHO05D007025 6.4e-110 401.0 232 86.2
Haze_26069 Corylus avellana HOM05D005951 ORTHO05D007025 8.4e-110 400.6 251 83.3
Peaxi162Scf00474g00521 Petunia axillaris HOM05D005951 ORTHO05D007025 1.1e-109 400.2 227 85.0
Ciclev10009369m.g Citrus clementina HOM05D005951 ORTHO05D007025 1.9e-109 399.4 236 83.9
CsaV3_1G041410 Cucumis sativus L. HOM05D005951 ORTHO05D007025 1.9e-109 399.4 236 84.7
Cc06_g12700 Coffea canephora HOM05D005951 ORTHO05D007025 2.4e-109 399.1 240 83.8
Sed0006808 Sechium edule HOM05D005951 ORTHO05D007025 4.2e-109 398.3 236 83.9
ATR0317G112 Amborella trichopoda HOM05D005951 ORTHO05D007025 5.4e-109 397.9 236 84.3
arahy.Tifrunner.gnm1.ann1.JRQ3DB Arachis hypogaea HOM05D005951 ORTHO05D007025 5.4e-109 397.9 232 84.9
Glyma.13G114300 Glycine max HOM05D005951 ORTHO05D007025 5.4e-109 397.9 236 84.3
Eucgr.C03197 Eucalyptus grandis HOM05D005951 ORTHO05D007025 9.3e-109 397.1 224 85.7
Eucgr.L02230 Eucalyptus grandis HOM05D005951 ORTHO05D007025 9.3e-109 397.1 224 85.7
Lalb_Chr13g0299191 Lupinus albus HOM05D005951 ORTHO05D007025 9.3e-109 397.1 237 84.4
MD15G1223700 Malus domestica HOM05D005951 ORTHO05D007025 9.3e-109 397.1 232 85.3
FAN23G1113 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.6e-108 396.4 230 85.7
Phvul.003G127300 Phaseolus vulgaris HOM05D005951 ORTHO05D007025 3.5e-108 395.2 236 83.5
Medtr4g124640 Medicago truncatula HOM05D005951 ORTHO05D007025 1.0e-107 393.7 236 83.1
Lsat_1_v5_gn_5_138841 Lactuca sativa HOM05D005951 ORTHO05D007025 1.3e-107 393.3 236 80.5
MBI13_g01673_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 3.9e-107 391.7 234 83.8
AUR62028321 Chenopodium quinoa HOM05D005951 ORTHO05D007025 1.5e-106 389.8 220 85.0
Solyc07g042570.3 Solanum lycopersicum HOM05D005951 ORTHO05D007025 1.5e-106 389.8 226 83.6
PGSC0003DMG400013572 Solanum tuberosum HOM05D005951 ORTHO05D007025 1.5e-106 389.8 226 83.2
MSTRG.26500 Avicennia marina HOM05D005951 ORTHO05D007025 3.3e-106 388.7 240 80.0
Oeu041808.1 Olea europaea HOM05D005951 ORTHO05D007025 4.3e-106 388.3 239 79.9
EL10Ac8g18966 Beta vulgaris HOM05D005951 ORTHO05D007025 5.6e-106 387.9 238 80.3
CAN.G54.13 Capsicum annuum HOM05D005951 ORTHO05D007025 7.3e-106 387.5 236 81.4
Sopen07g022260 Solanum pennellii HOM05D005951 ORTHO05D007025 7.3e-106 387.5 226 82.7
Lalb_Chr07g0181411 Lupinus albus HOM05D005951 ORTHO05D007025 2.1e-105 386.0 237 83.1
BraA01t00476Z Brassica rapa HOM05D000526 ORTHO05D007025 2.8e-105 385.6 236 82.2
PSO724G0923 Papaver somniferum HOM05D005951 ORTHO05D007025 8.1e-105 384.0 236 80.9
Sp7g31000 Schrenkiella parvula HOM05D005951 ORTHO05D007025 1.4e-104 383.3 236 80.9
PSO135G0575 Papaver somniferum HOM05D005951 ORTHO05D007025 1.8e-104 382.9 236 80.9
BcaC01g01000 Brassica carinata HOM05D005951 ORTHO05D007025 2.4e-104 382.5 236 80.1
BolC3t20971H Brassica oleracea HOM05D005951 ORTHO05D007025 2.4e-104 382.5 236 80.1
BraA08t33722Z Brassica rapa HOM05D005951 ORTHO05D007025 3.1e-104 382.1 237 80.6
C01p05390 Brassica napus HOM05D000526 ORTHO05D000956 4.0e-104 381.7 234 81.6
TPR.G12577 Trifolium pratense HOM05D005951 ORTHO05D007025 4.0e-104 381.7 230 82.6
BcaC09g52137 Brassica carinata HOM05D005951 ORTHO05D007025 6.9e-104 380.9 236 81.4
Thhalv10026154m.g Eutrema salsugineum HOM05D005951 ORTHO05D007025 6.9e-104 380.9 236 80.5
C03p86770 Brassica napus HOM05D005951 ORTHO05D007025 9.0e-104 380.6 237 80.6
DCAR_028530 Daucus carota HOM05D005951 ORTHO05D007025 9.0e-104 380.6 236 80.5
BolC1t00519H Brassica oleracea HOM05D000526 ORTHO05D007025 1.5e-103 379.8 227 83.3
BcaB03g12809 Brassica carinata HOM05D005951 ORTHO05D007025 2.6e-103 379.0 236 78.8
A08p17720 Brassica napus HOM05D005951 ORTHO05D007025 5.8e-103 377.9 228 81.6
AL7G18300 Arabidopsis lyrata HOM05D005951 ORTHO05D007025 7.6e-103 377.5 227 81.9
Migut.J00881 Erythranthe guttata HOM05D005951 ORTHO05D007025 2.9e-102 375.6 240 77.9
SGA_v2.0_scaffold55G19875 Striga asiatica HOM05D005951 ORTHO05D007025 2.9e-102 375.6 238 79.4
Carub.0007s0721 Capsella rubella HOM05D005951 ORTHO05D007025 3.8e-102 375.2 236 79.2
PGR044G1586 Punica granatum HOM05D005951 ORTHO05D007025 1.1e-101 373.6 225 83.1
THA.LOC104803783 Tarenaya hassleriana HOM05D005951 ORTHO05D007025 1.4e-101 373.2 236 78.4
ECA234G1587 Erigeron canadensis HOM05D005951 ORTHO05D007025 4.2e-101 371.7 236 77.1
AT4G33250 Arabidopsis thaliana HOM05D005951 ORTHO05D007025 5.4e-101 371.3 227 81.5
Aa31LG5G9380 Aethionema arabicum HOM05D005951 ORTHO05D007025 9.3e-101 370.5 220 82.7
HPP92_004361 Vanilla planifolia HOM05D005951 ORTHO05D007025 9.3e-101 370.5 221 82.4
SEGI_21232 Sequoiadendron giganteum HOM05D005951 ORTHO05D007025 1.6e-100 369.8 234 77.8
CDE07G2051 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 2.1e-100 369.4 237 78.1
Os03g0182700 Oryza sativa ssp. japonica HOM05D005951 ORTHO05D007025 2.3e-99 365.9 226 79.2
Zm00001eb401690 Zea mays HOM05D005951 ORTHO05D007025 3.9e-99 365.2 226 80.1
Oeu000276.3 Olea europaea HOM05D005951 ORTHO05D007025 1.1e-98 363.6 304 64.1
HanXRQChr10g0319821 Helianthus annuus HOM05D005951 ORTHO05D007025 1.5e-98 363.2 226 80.5
A03p61920 Brassica napus HOM05D000526 ORTHO05D007025 4.3e-98 361.7 253 72.7
MELO3C015553.2 Cucumis melo HOM05D005951 ORTHO05D007025 2.1e-97 359.4 236 78.8
MBI19_g36230_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 2.1e-97 359.4 236 80.1
vmacro17078 Vaccinium macrocarpon HOM05D005951 ORTHO05D007025 2.4e-96 355.9 330 61.2
unitig_899.g15181 Utricularia gibba HOM05D005951 ORTHO05D007025 6.9e-96 354.4 228 74.1
Lj7C692T6 Lonicera japonica HOM05D005951 ORTHO05D007025 6.5e-94 347.8 240 75.8
Nitab4.5_0003139g0080 Nicotiana tabacum HOM05D005951 ORTHO05D007025 1.1e-93 347.1 236 74.6
Actinidia30258 Actinidia chinensis HOM05D005951 ORTHO05D007025 3.0e-91 339.0 187 90.4
C07p59570 Brassica napus HOM05D005951 ORTHO05D007025 3.3e-90 335.5 236 72.5
Mapoly0073s0056 Marchantia polymorpha HOM05D005951 ORTHO05D007025 3.3e-90 335.5 221 71.9
Hund26110 Selenicereus undatus HOM05D005951 ORTHO05D007025 9.6e-90 334.0 219 75.3
BcaNung02163 Brassica carinata HOM05D005951 ORTHO05D007025 2.8e-89 332.4 236 71.6
AUR62025338 Chenopodium quinoa HOM05D005951 ORTHO05D007025 2.8e-89 332.4 192 82.8
BraA03t15230Z Brassica rapa HOM05D005951 ORTHO05D007025 1.7e-86 323.2 188 84.0
Pp3c18_14720 Physcomitrium patens HOM05D005951 ORTHO05D007025 1.1e-85 320.5 217 70.5
Pp3c21_14860 Physcomitrium patens HOM05D005951 ORTHO05D007025 1.1e-85 320.5 217 70.0
Zm00001eb401710 Zea mays HOM05D005951 ORTHO05D007025 4.6e-84 315.1 198 78.8
CDE06G1359 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 1.0e-83 313.9 201 78.6
Rhsim05G0002100 Rhododendron simsii HOM05D005951 ORTHO05D007025 1.0e-83 313.9 235 69.8
SMO239G0051 Selaginella moellendorffii HOM05D005951 ORTHO05D007025 1.1e-82 310.5 225 64.9
BolC7t46402H Brassica oleracea HOM05D005951 ORTHO05D007025 9.7e-74 280.8 197 71.1
Zm00001eb006150 Zea mays HOM05D005951 ORTHO05D007025 1.5e-71 273.5 168 78.6
Sc08g0009170 Simmondsia chinensis HOM05D005951 ORTHO05D007025 2.1e-68 263.1 154 84.4
Migut.L01596 Erythranthe guttata HOM05D005951 ORTHO05D007025 6.1e-68 261.5 227 61.7
CBR_g16046 Chara braunii HOM05D005951 ORTHO05D007025 7.5e-58 228.0 218 53.2
AagrBONN_evm.TU.Sc2ySwM_117.912 Anthoceros agrestis HOM05D005951 ORTHO05D007025 1.1e-56 224.2 150 69.3
CARHR241300 Cardamine hirsuta HOM05D005951 ORTHO05D007025 7.7e-47 191.4 119 74.8
SalBow6G6500 Salvia bowleyana HOM05D005951 ORTHO05D007025 3.1e-40 169.5 105 82.9
Cre12.g515650 Chlamydomonas reinhardtii HOM05D005951 ORTHO05D007025 1.6e-36 157.1 201 38.3
MD02G1101200 Malus domestica HOM05D005951 ORTHO05D007025 4.1e-32 142.5 97 78.4
PRCOL_00003879 Prasinoderma coloniale HOM05D005951 ORTHO05D007025 3.2e-24 116.3 208 32.7
ATR0705G105 Amborella trichopoda HOM05D005951 ORTHO05D007025 8.1e-12 75.1 74 48.6


User provided reference genes

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