Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 3.4e-220 768.1 396 100.0
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 3.4e-148 528.9 397 73.0
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 4.0e-88 329.3 416 51.7
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 1.3e-86 324.3 431 48.0
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 1.6e-84 317.4 433 48.0
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 8.6e-83 311.6 440 46.6
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 1.1e-82 311.2 390 52.3
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 7.3e-82 308.5 416 49.5
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 2.8e-81 306.6 416 48.3
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 3.6e-81 306.2 430 50.0
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 1.1e-80 304.7 425 49.4
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 6.8e-80 302.0 426 47.9
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 8.9e-80 301.6 445 45.2
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 2.0e-79 300.4 413 47.9
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 5.8e-79 298.9 432 47.7
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 9.8e-79 298.1 380 51.8
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 5.4e-77 292.4 420 46.2
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 7.0e-77 292.0 385 50.9
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 1.6e-76 290.8 381 51.2
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 2.7e-76 290.0 430 47.4
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 1.7e-75 287.3 379 49.3
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 2.3e-75 287.0 415 47.7
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 2.5e-74 283.5 362 51.4
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 5.6e-74 282.3 402 47.0
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 6.2e-73 278.9 443 43.6
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 8.1e-73 278.5 435 44.8
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 3.1e-72 276.6 408 47.8
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 4.0e-72 276.2 457 44.2
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 1.2e-71 274.6 450 42.9
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 2.9e-70 270.0 423 44.2
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 1.2e-68 264.6 360 48.9
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 3.5e-68 263.1 425 44.5
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 3.5e-68 263.1 488 40.0
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 7.8e-68 261.9 425 44.2
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 1.3e-67 261.2 424 43.4
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 4.3e-66 256.1 398 43.5
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 5.6e-66 255.8 392 45.4
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 1.1e-64 251.5 432 44.0
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 9.9e-63 245.0 434 41.5
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 6.4e-62 242.3 476 40.1
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 6.4e-62 242.3 451 40.6
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 6.0e-60 235.7 418 42.1
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 6.6e-59 232.3 475 39.2
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 8.7e-59 231.9 362 43.9
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 1.1e-58 231.5 409 42.1
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 3.3e-58 229.9 361 44.0
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 8.1e-57 225.3 474 38.8
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 1.1e-56 224.9 425 40.0
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 1.1e-56 224.9 385 43.6
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 2.4e-56 223.8 431 39.9
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 2.4e-56 223.8 445 39.3
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 9.0e-56 221.9 439 39.9
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 1.5e-55 221.1 420 40.2
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 1.3e-54 218.0 414 39.1
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 1.3e-54 218.0 414 40.3
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 8.4e-54 215.3 435 40.7
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 8.4e-54 215.3 379 43.3
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 3.2e-53 213.4 422 39.3
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 4.2e-53 213.0 483 39.3
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 9.3e-53 211.8 250 52.0
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 1.2e-52 211.5 436 38.1
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 1.0e-51 208.4 428 38.3
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 1.3e-51 208.0 415 37.8
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 3.0e-51 206.8 243 51.9
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 3.9e-51 206.5 438 39.0
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 5.1e-51 206.1 419 40.3
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 1.1e-50 204.9 396 39.4
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 1.1e-50 204.9 262 49.2
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 2.5e-50 203.8 418 39.2
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 2.5e-50 203.8 436 39.2
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 2.1e-49 200.7 464 37.5
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 4.8e-49 199.5 430 38.6
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 5.3e-48 196.1 271 49.4
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 7.6e-47 192.2 421 36.8
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 9.9e-47 191.8 436 38.8
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 7.1e-45 185.7 421 38.7
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 9.3e-45 185.3 421 38.7
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 1.8e-43 181.0 420 35.0
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 3.9e-43 179.9 306 41.8
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 8.1e-41 172.2 378 36.8
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 2.4e-40 170.6 230 47.8
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 1.0e-38 165.2 384 37.0
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 4.9e-38 162.9 397 34.5
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 1.1e-37 161.8 251 44.6
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 2.5e-34 150.6 308 39.3
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 1.3e-33 148.3 388 34.3
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 1.8e-32 144.4 263 41.8
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 1.4e-29 134.8 342 37.1
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 1.0e-27 128.6 84 77.4
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 4.3e-26 123.2 360 35.0
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 5.7e-26 122.9 308 35.4
MD12G1122600 Malus domestica HOM05D007360 ORTHO05D008235 3.1e-24 117.1 120 55.8
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 7.7e-23 112.5 274 34.3
Phvul.001G175350 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 9.4e-21 105.5 256 34.4
HanXRQChr02g0051981 Helianthus annuus HOM05D007360 ORTHO05D008235 7.4e-10 69.3 120 40.8
Manes.09G079705 Manihot esculenta HOM05D007360 ORTHO05D008235 7.4e-10 69.3 53 67.9
TAR625G1494 Trochodendron aralioides HOM05D005497 ORTHO05D006733 1.7e-09 68.2 276 30.4
ClCG05G016330 Citrullus lanatus HOM05D005497 ORTHO05D006733 4.8e-09 66.6 240 27.5
SMO367G0340 Selaginella moellendorffii HOM05D018912 ORTHO05D004121 8.2e-09 65.9 248 26.6
AagrBONN_evm.TU.Sc2ySwM_228.3362 Anthoceros agrestis HOM05D018912 ORTHO05D021275 9.1e-08 62.4 300 26.7
Hund20189 Selenicereus undatus HOM05D007360 ORTHO05D008235 9.1e-08 62.4 109 38.5
SEGI_31561 Sequoiadendron giganteum HOM05D007360 ORTHO05D008235 1.2e-07 62.0 251 26.7
SMO116G0351 Selaginella moellendorffii HOM05D005497 ORTHO05D006733 1.5e-07 61.6 152 32.9
Hma1.2p1_1284F.1_g272900 Hydrangea macrophylla HOM05D005497 ORTHO05D006733 3.5e-07 60.5 314 25.8
MELO3C016964.2 Cucumis melo HOM05D005497 ORTHO05D006733 7.7e-07 59.3 250 25.2
Oeu030218.3 Olea europaea HOM05D005497 ORTHO05D006733 7.7e-07 59.3 335 25.7
Pp3c12_23920 Physcomitrium patens HOM05D018912 ORTHO05D021275 7.7e-07 59.3 278 25.9
MBI15_g07765_MAGBIO Magnolia biondii HOM05D005497 ORTHO05D006733 1.0e-06 58.9 296 24.3
Actinidia04644 Actinidia chinensis HOM05D007360 ORTHO05D008235 5.0e-06 56.6 50 58.0
Actinidia14388 Actinidia chinensis HOM05D004499 ORTHO05D004928 5.0e-06 56.6 50 58.0
Actinidia28468 Actinidia chinensis HOM05D007360 ORTHO05D008235 5.0e-06 56.6 50 58.0
Actinidia33720 Actinidia chinensis HOM05D007360 ORTHO05D008235 5.0e-06 56.6 50 58.0
Aqoxy2G02176 Aquilegia oxysepala HOM05D005497 ORTHO05D006733 8.5e-06 55.8 237 24.9
Ciclev10008815m.g Citrus clementina HOM05D005497 ORTHO05D006733 8.5e-06 55.8 233 24.5
Glyma.06G061800 Glycine max HOM05D005497 ORTHO05D006733 8.5e-06 55.8 236 28.0
VMungo1309G2451 Vigna mungo HOM05D005497 ORTHO05D006733 8.5e-06 55.8 259 27.4


User provided reference genes

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