Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G130400 Populus trichocarpa HOM05D007569 ORTHO05D009268 3.8e-47 191.0 90 100.0
Potri.016G087000 Populus trichocarpa HOM05D007569 ORTHO05D009268 2.5e-38 161.8 90 86.7
Sabra16G0093200 Salix brachista HOM05D007569 ORTHO05D009268 2.7e-32 141.7 91 76.9
Sabra06G0102400 Salix brachista HOM05D007569 ORTHO05D009268 5.1e-31 137.5 92 78.3
Prupe.6G240500 Prunus persica HOM05D007569 ORTHO05D009268 7.3e-22 107.1 91 60.4
QL07p045078 Quercus lobata HOM05D007569 ORTHO05D009268 1.1e-17 93.2 89 52.8
Haze_20627 Corylus avellana HOM05D007569 ORTHO05D009268 5.4e-17 90.9 92 59.8
Manes.08G004500 Manihot esculenta HOM05D007569 ORTHO05D009268 9.2e-17 90.1 90 54.4
Dinv35729 Davidia involucrata HOM05D007569 ORTHO05D009268 8.7e-15 83.6 92 50.0
Manes.09G078021 Manihot esculenta HOM05D007569 ORTHO05D009268 2.5e-14 82.0 91 51.6
Thecc.05G055900 Theobroma cacao HOM05D007569 ORTHO05D009268 2.5e-14 82.0 86 57.0
Actinidia19698 Actinidia chinensis HOM05D007569 ORTHO05D009268 3.3e-14 81.6 92 52.2
CiPaw.10G136600 Carya illinoinensis HOM05D007569 ORTHO05D009268 3.3e-14 81.6 91 51.6
Duzib093G0005 Durio zibethinus HOM05D007569 ORTHO05D009268 3.3e-14 81.6 82 59.8
CiPaw.10G136400 Carya illinoinensis HOM05D007569 ORTHO05D009268 4.3e-14 81.3 91 51.6
RcHm_v2.0_Chr3g0469031 Rosa chinensis HOM05D007569 ORTHO05D009268 7.3e-14 80.5 99 51.5
COL.COLO4_27060 Corchorus olitorius HOM05D007569 ORTHO05D009268 1.2e-13 79.7 88 55.7
GSVIVG01025645001 Vitis vinifera HOM05D007569 ORTHO05D009268 1.6e-13 79.3 84 52.4
MD04G1102400 Malus domestica HOM05D007569 ORTHO05D009268 3.6e-13 78.2 92 47.8
FAN05G3967 Fragaria x ananassa HOM05D007569 ORTHO05D009268 4.7e-13 77.8 101 47.5
CiPaw.09G178900 Carya illinoinensis HOM05D007569 ORTHO05D009268 6.2e-13 77.4 95 49.5
Ciclev10013224m.g Citrus clementina HOM05D007569 ORTHO05D009268 8.1e-13 77.0 92 53.3
FvH4_6g15530 Fragaria vesca HOM05D007569 ORTHO05D009268 8.1e-13 77.0 98 50.0
FAN14G4266 Fragaria x ananassa HOM05D007569 ORTHO05D009268 8.1e-13 77.0 98 50.0
Cpa.g.sc368.3 Carica papaya HOM05D007569 ORTHO05D009268 1.1e-12 76.6 94 51.1
CSS0032625 Camellia sinensis var. sinensis HOM05D007569 ORTHO05D009268 3.1e-12 75.1 93 45.2
Actinidia05265 Actinidia chinensis HOM05D007569 ORTHO05D009268 6.9e-12 73.9 91 48.4
Cc06_g03690 Coffea canephora HOM05D007569 ORTHO05D009268 1.2e-11 73.2 88 46.6
Gohir.A01G216400 Gossypium hirsutum HOM05D007569 ORTHO05D009268 4.4e-11 71.2 79 54.4
Gorai.002G249500 Gossypium raimondii HOM05D007569 ORTHO05D009268 4.4e-11 71.2 79 54.4
Oeu026850.1 Olea europaea HOM05D007569 ORTHO05D009268 1.3e-10 69.7 94 47.9
Glyma.13G138100 Glycine max HOM05D007569 ORTHO05D009268 1.7e-10 69.3 98 43.9
MD12G1122100 Malus domestica HOM05D007569 ORTHO05D009268 2.2e-10 68.9 63 54.0
Glyma.10G050600 Glycine max HOM05D007569 ORTHO05D009268 2.9e-10 68.6 58 63.8
Lalb_Chr25g0289201 Lupinus albus HOM05D007569 ORTHO05D009268 2.9e-10 68.6 75 52.0
Gohir.D01G205200 Gossypium hirsutum HOM05D007569 ORTHO05D009268 4.9e-10 67.8 79 53.2
Nn2g10705 Nelumbo nucifera HOM05D007569 ORTHO05D009268 4.9e-10 67.8 76 53.9
PGR004G0018 Punica granatum HOM05D007569 ORTHO05D009268 4.9e-10 67.8 99 48.5
TAR623G1008 Trochodendron aralioides HOM05D007569 ORTHO05D009268 6.4e-10 67.4 84 53.6
Medtr7g100860 Medicago truncatula HOM05D007569 ORTHO05D009268 8.4e-10 67.0 96 45.8
Nitab4.5_0003871g0030 Nicotiana tabacum HOM05D007569 ORTHO05D009268 1.1e-09 66.6 93 45.2
TWI74G0066 Tripterygium wilfordii HOM05D007569 ORTHO05D009268 1.1e-09 66.6 96 47.9
EL10Ac7g16512 Beta vulgaris HOM05D007569 ORTHO05D009268 4.2e-09 64.7 71 49.3
Lj5g0021553 Lotus japonicus HOM05D007569 ORTHO05D009268 4.2e-09 64.7 60 60.0
Atru.chr8.1895 Acer truncatum HOM05D004499 ORTHO05D004928 5.4e-09 64.3 78 50.0
Sp6g39590 Schrenkiella parvula HOM05D007569 ORTHO05D009268 5.4e-09 64.3 61 55.7
Nn2g13029 Nelumbo nucifera HOM05D007569 ORTHO05D009268 7.1e-09 63.9 85 47.1
Gorai.013G026900 Gossypium raimondii HOM05D007569 ORTHO05D009268 9.3e-09 63.5 80 45.0
A03p01020 Brassica napus HOM05D007569 ORTHO05D009268 1.2e-08 63.2 61 55.7
BraA03t09483Z Brassica rapa HOM05D007569 ORTHO05D009268 1.2e-08 63.2 61 55.7
Psat3g044160 Pisum sativum HOM05D007569 ORTHO05D009268 1.2e-08 63.2 42 66.7
Aqoxy4G03229 Aquilegia oxysepala HOM05D007569 ORTHO05D009268 1.6e-08 62.8 88 45.5
Solyc10g150149.1 Solanum lycopersicum HOM05D007569 ORTHO05D009268 2.7e-08 62.0 94 40.4
ClCG04G008870 Citrullus lanatus HOM05D031093 ORTHO05D009268 3.5e-08 61.6 54 59.3
Gohir.A13G025100 Gossypium hirsutum HOM05D007569 ORTHO05D009268 4.6e-08 61.2 80 47.5
RhsimUnG0115600 Rhododendron simsii HOM05D007569 ORTHO05D009268 4.6e-08 61.2 92 43.5
Nitab4.5_0006156g0030 Nicotiana tabacum HOM05D007569 ORTHO05D009268 6.0e-08 60.8 94 37.2
Phvul.007G107600 Phaseolus vulgaris HOM05D007569 ORTHO05D009268 6.0e-08 60.8 71 50.7
PGSC0003DMG400001743 Solanum tuberosum HOM05D007569 ORTHO05D009268 6.0e-08 60.8 95 45.3
AT5G03120 Arabidopsis thaliana HOM05D007569 ORTHO05D009268 7.8e-08 60.5 55 54.5
Thhalv10015759m.g Eutrema salsugineum HOM05D007569 ORTHO05D009268 7.8e-08 60.5 61 55.7
Lalb_Chr01g0018971 Lupinus albus HOM05D007569 ORTHO05D009268 7.8e-08 60.5 69 52.2
Nitab4.5_0000669g0110 Nicotiana tabacum HOM05D007569 ORTHO05D009268 7.8e-08 60.5 95 41.1
AL6G12400 Arabidopsis lyrata HOM05D007569 ORTHO05D009268 1.0e-07 60.1 61 55.7
CsaV3_6G039370 Cucumis sativus L. HOM05D031093 ORTHO05D009268 1.3e-07 59.7 70 51.4
FAN02G0921 Fragaria x ananassa HOM05D000214 ORTHO05D009268 1.3e-07 59.7 79 48.1
CANSAT80G1933 Cannabis sativa HOM05D007569 ORTHO05D009268 1.7e-07 59.3 80 42.5
BcaC03g13030 Brassica carinata HOM05D007569 ORTHO05D009268 3.0e-07 58.5 61 55.7
C02p00800 Brassica napus HOM05D004310 ORTHO05D009268 3.0e-07 58.5 61 55.7
BraA02t04745Z Brassica rapa HOM05D007569 ORTHO05D009268 3.0e-07 58.5 61 55.7
Nitab4.5_0008568g0070 Nicotiana tabacum HOM05D007569 ORTHO05D009268 3.0e-07 58.5 86 41.9
Aa31LG1G21950 Aethionema arabicum HOM05D007569 ORTHO05D009268 3.9e-07 58.2 82 46.3
BcaB05g21850 Brassica carinata HOM05D007569 ORTHO05D009268 3.9e-07 58.2 61 54.1
CARHR210230 Cardamine hirsuta HOM05D007569 ORTHO05D009268 3.9e-07 58.2 61 52.5
Medtr1g066720 Medicago truncatula HOM05D007569 ORTHO05D009268 3.9e-07 58.2 60 56.7
BcaB01g05860 Brassica carinata HOM05D007569 ORTHO05D009268 5.1e-07 57.8 61 54.1
C03p01310 Brassica napus HOM05D007569 ORTHO05D009268 5.1e-07 57.8 61 54.1
BolC3t12690H Brassica oleracea HOM05D007569 ORTHO05D009268 5.1e-07 57.8 61 54.1
Migut.L01668 Erythranthe guttata HOM05D007569 ORTHO05D009268 6.6e-07 57.4 81 43.2
Sed0009226 Sechium edule HOM05D031093 ORTHO05D009268 6.6e-07 57.4 83 45.8
Oeu060096.1 Olea europaea HOM05D007569 ORTHO05D009268 8.7e-07 57.0 76 46.1
Gohir.D13G023800 Gossypium hirsutum HOM05D007569 ORTHO05D009268 1.1e-06 56.6 81 45.7
Lsat_1_v5_gn_6_30260 Lactuca sativa HOM05D007569 ORTHO05D009268 1.1e-06 56.6 100 43.0
Peaxi162Scf00005g00394 Petunia axillaris HOM05D007569 ORTHO05D009268 1.1e-06 56.6 94 39.4
PGR142G4405 Punica granatum HOM05D007569 ORTHO05D009268 1.1e-06 56.6 66 53.0
TPR.G28044 Trifolium pratense HOM05D007569 ORTHO05D009268 1.5e-06 56.2 86 43.0
arahy.Tifrunner.gnm1.ann1.4H2E4D Arachis hypogaea HOM05D007569 ORTHO05D009268 3.3e-06 55.1 69 47.8
arahy.Tifrunner.gnm1.ann1.PY3JPZ Arachis hypogaea HOM05D007569 ORTHO05D009268 3.3e-06 55.1 69 47.8
BolC2t06078H Brassica oleracea HOM05D004310 ORTHO05D009268 4.3e-06 54.7 70 48.6
Carub.0006s0192 Capsella rubella HOM05D007569 ORTHO05D009268 4.3e-06 54.7 80 42.5
DCAR_020844 Daucus carota HOM05D007569 ORTHO05D009268 5.6e-06 54.3 62 46.8
Eucgr.A01170 Eucalyptus grandis HOM05D007569 ORTHO05D009268 7.3e-06 53.9 40 60.0
Peaxi162Scf00472g00312 Petunia axillaris HOM05D007569 ORTHO05D009268 7.3e-06 53.9 93 41.9
Oeu059987.1 Olea europaea HOM05D007569 ORTHO05D009268 9.6e-06 53.5 62 51.6
Psat6g070160 Pisum sativum HOM05D007569 ORTHO05D009268 9.6e-06 53.5 58 46.6


User provided reference genes

Program Settings