Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G127800 Populus trichocarpa HOM05D006467 ORTHO05D008012 1.6e-62 242.7 129 100.0
Potri.016G090000 Populus trichocarpa HOM05D006467 ORTHO05D008012 1.4e-58 229.6 129 93.0
Sabra16G0095600 Salix brachista HOM05D006467 ORTHO05D008012 6.1e-54 214.2 146 79.5
Manes.08G007300 Manihot esculenta HOM05D006467 ORTHO05D008012 1.3e-48 196.4 124 82.3
Sabra06G0100500 Salix brachista HOM05D006467 ORTHO05D008012 5.0e-48 194.5 171 66.7
MD04G1097300 Malus domestica HOM05D006467 ORTHO05D008012 5.2e-37 157.9 127 67.7
Prupe.6G236600 Prunus persica HOM05D006467 ORTHO05D008012 5.2e-37 157.9 125 67.2
TWI77G0724 Tripterygium wilfordii HOM05D006467 ORTHO05D008012 5.2e-37 157.9 128 63.3
Thecc.05G060700 Theobroma cacao HOM05D006467 ORTHO05D008012 6.8e-37 157.5 128 62.5
Hma1.2p1_0614F.1_g189470 Hydrangea macrophylla HOM05D006467 ORTHO05D008012 8.8e-37 157.1 126 62.7
CiPaw.09G176000 Carya illinoinensis HOM05D006467 ORTHO05D008012 2.0e-36 156.0 125 64.0
MD12G1118700 Malus domestica HOM05D006467 ORTHO05D008012 2.0e-36 156.0 129 66.7
RcHm_v2.0_Chr3g0469601 Rosa chinensis HOM05D006467 ORTHO05D008012 2.0e-36 156.0 124 66.1
FAN09G2873 Fragaria x ananassa HOM05D006467 ORTHO05D008012 2.6e-36 155.6 125 64.8
Atru.chr8.1867 Acer truncatum HOM05D006467 ORTHO05D008012 5.7e-36 154.5 129 61.2
AL4G33560 Arabidopsis lyrata HOM05D006467 ORTHO05D008012 7.5e-36 154.1 124 62.9
GSVIVG01025685001 Vitis vinifera HOM05D006467 ORTHO05D008012 7.5e-36 154.1 111 71.2
Ciclev10013106m.g Citrus clementina HOM05D006467 ORTHO05D008012 1.3e-35 153.3 128 59.4
Dinv35529 Davidia involucrata HOM05D006467 ORTHO05D008012 1.3e-35 153.3 125 62.4
Dinv35757 Davidia involucrata HOM05D006467 ORTHO05D008012 1.3e-35 153.3 126 61.1
Actinidia19675 Actinidia chinensis HOM05D006467 ORTHO05D008012 3.7e-35 151.8 126 60.3
QL07p044433 Quercus lobata HOM05D006467 ORTHO05D008012 3.7e-35 151.8 121 65.3
Cfa017565 Carpinus fangiana HOM05D006467 ORTHO05D008012 6.3e-35 151.0 125 61.6
FAN14G3947 Fragaria x ananassa HOM05D006467 ORTHO05D008012 1.1e-34 150.2 125 61.6
FAN02G4276 Fragaria x ananassa HOM05D006467 ORTHO05D008012 1.4e-34 149.8 125 63.2
A03p20520 Brassica napus HOM05D006467 ORTHO05D008012 2.4e-34 149.1 126 61.1
C03p24120 Brassica napus HOM05D006467 ORTHO05D008012 2.4e-34 149.1 126 60.3
BraA03t11294Z Brassica rapa HOM05D006467 ORTHO05D008012 2.4e-34 149.1 126 61.1
Gohir.D09G145300 Gossypium hirsutum HOM05D006467 ORTHO05D008012 3.1e-34 148.7 126 60.3
BcaC01g06644 Brassica carinata HOM05D006467 ORTHO05D008012 4.1e-34 148.3 126 60.3
Duzib128G1557 Durio zibethinus HOM05D006467 ORTHO05D008012 7.0e-34 147.5 128 60.2
TAR623G0732 Trochodendron aralioides HOM05D006467 ORTHO05D008012 9.1e-34 147.1 127 59.8
TAR369G0155 Trochodendron aralioides HOM05D006467 ORTHO05D008012 1.2e-33 146.7 124 62.1
Nn2g13105 Nelumbo nucifera HOM05D006467 ORTHO05D008012 1.6e-33 146.4 124 58.9
BolC3t14804H Brassica oleracea HOM05D006467 ORTHO05D008012 2.7e-33 145.6 127 59.8
CSS0042234 Camellia sinensis var. sinensis HOM05D006467 ORTHO05D008012 3.5e-33 145.2 127 59.8
Thhalv10017389m.g Eutrema salsugineum HOM05D006467 ORTHO05D008012 5.9e-33 144.4 126 59.5
FvH4_6g15910 Fragaria vesca HOM05D006467 ORTHO05D008012 5.9e-33 144.4 132 56.8
MELO3C009340.2 Cucumis melo HOM05D006467 ORTHO05D008012 7.7e-33 144.1 128 55.5
Cpa.g.sc102.12 Carica papaya HOM05D006467 ORTHO05D008012 1.0e-32 143.7 126 61.1
Carub.0004s1909 Capsella rubella HOM05D006467 ORTHO05D008012 1.7e-32 142.9 124 59.7
Gohir.A04G074100 Gossypium hirsutum HOM05D006467 ORTHO05D008012 2.3e-32 142.5 123 59.3
THA.LOC104823447 Tarenaya hassleriana HOM05D006467 ORTHO05D008012 2.3e-32 142.5 124 56.5
CsaV3_3G035800 Cucumis sativus L. HOM05D006467 ORTHO05D008012 2.9e-32 142.1 128 55.5
Gohir.A09G149400 Gossypium hirsutum HOM05D006467 ORTHO05D008012 2.9e-32 142.1 125 59.2
Lsat_1_v5_gn_2_109060 Lactuca sativa HOM05D006467 ORTHO05D008012 2.9e-32 142.1 120 60.0
Sp4g19510 Schrenkiella parvula HOM05D006467 ORTHO05D008012 2.9e-32 142.1 126 57.9
COL.COLO4_27023 Corchorus olitorius HOM05D006467 ORTHO05D008012 3.8e-32 141.7 146 55.5
AT2G37195 Arabidopsis thaliana HOM05D006467 ORTHO05D008012 5.0e-32 141.4 126 57.9
Gorai.009G417600 Gossypium raimondii HOM05D006467 ORTHO05D008012 6.5e-32 141.0 135 56.3
PGR142G2369 Punica granatum HOM05D006467 ORTHO05D008012 6.5e-32 141.0 124 57.3
Lj5g0010745 Lotus japonicus HOM05D006467 ORTHO05D008012 1.1e-31 140.2 128 59.4
EL10Ac7g16554 Beta vulgaris HOM05D006467 ORTHO05D008012 1.5e-31 139.8 126 58.7
Lj2A112T40 Lonicera japonica HOM05D006467 ORTHO05D008012 1.9e-31 139.4 119 63.0
Gorai.006G166500 Gossypium raimondii HOM05D006467 ORTHO05D008012 3.2e-31 138.7 141 53.9
Ca_11474_v3 Cicer arietinum L. HOM05D006467 ORTHO05D008012 4.2e-31 138.3 128 55.5
Oeu059967.1 Olea europaea HOM05D006467 ORTHO05D008012 5.5e-31 137.9 124 57.3
Peaxi162Scf00123g00014 Petunia axillaris HOM05D006467 ORTHO05D008012 7.2e-31 137.5 120 58.3
Sopen09g002640 Solanum pennellii HOM05D006467 ORTHO05D008012 7.2e-31 137.5 127 56.7
TPR.G21203 Trifolium pratense HOM05D006467 ORTHO05D008012 1.2e-30 136.7 128 57.0
CARHR131710 Cardamine hirsuta HOM05D006467 ORTHO05D008012 1.6e-30 136.3 128 57.8
AUR62033514 Chenopodium quinoa HOM05D006467 ORTHO05D008012 1.6e-30 136.3 129 57.4
ClCG10G020300 Citrullus lanatus HOM05D006467 ORTHO05D008012 2.1e-30 136.0 128 54.7
PGSC0003DMG400021546 Solanum tuberosum HOM05D006467 ORTHO05D008012 2.8e-30 135.6 127 55.9
HanXRQChr07g0195271 Helianthus annuus HOM05D006467 ORTHO05D008012 3.6e-30 135.2 121 57.9
Solyc09g007800.3 Solanum lycopersicum HOM05D006467 ORTHO05D008012 3.6e-30 135.2 127 55.1
AUR62028561 Chenopodium quinoa HOM05D006467 ORTHO05D008012 4.7e-30 134.8 128 57.0
Glyma.10G053300 Glycine max HOM05D006467 ORTHO05D008012 4.7e-30 134.8 127 55.1
Medtr1g064490 Medicago truncatula HOM05D006467 ORTHO05D008012 4.7e-30 134.8 127 56.7
Aa31LG5G22520 Aethionema arabicum HOM05D006467 ORTHO05D008012 1.0e-29 133.7 126 55.6
Sed0017827 Sechium edule HOM05D006467 ORTHO05D008012 1.0e-29 133.7 128 55.5
CANSAT80G0273 Cannabis sativa HOM05D006467 ORTHO05D008012 1.4e-29 133.3 124 57.3
Glyma.13G140300 Glycine max HOM05D006467 ORTHO05D008012 2.3e-29 132.5 129 55.0
Nitab4.5_0003923g0010 Nicotiana tabacum HOM05D006467 ORTHO05D008012 2.3e-29 132.5 123 58.5
Aqoxy1G01232 Aquilegia oxysepala HOM05D006467 ORTHO05D008012 5.2e-29 131.3 122 54.1
ECA238G0062 Erigeron canadensis HOM05D006467 ORTHO05D008012 8.8e-29 130.6 120 55.8
VMungo0720G0455 Vigna mungo HOM05D006467 ORTHO05D008012 8.8e-29 130.6 128 52.3
Sc02g0001830 Simmondsia chinensis HOM05D006467 ORTHO05D008012 1.5e-28 129.8 125 54.4
MSTRG.19165 Avicennia marina HOM05D006467 ORTHO05D008012 2.0e-28 129.4 122 55.7
PSO063G5019 Papaver somniferum HOM05D006467 ORTHO05D008012 2.0e-28 129.4 124 50.8
PSO339G1849 Papaver somniferum HOM05D006467 ORTHO05D008012 2.0e-28 129.4 124 50.8
Nitab4.5_0000101g0130 Nicotiana tabacum HOM05D006467 ORTHO05D008012 2.6e-28 129.0 123 55.3
Ah.15g092380 Amaranthus hybridus HOM05D006467 ORTHO05D008012 5.7e-28 127.9 129 52.7
SGA_v2.0_scaffold40G15542 Striga asiatica HOM05D006467 ORTHO05D008012 1.3e-27 126.7 134 51.5
Nn2g10804 Nelumbo nucifera HOM05D006467 ORTHO05D008012 1.7e-27 126.3 122 52.5
MBI07_g19293_MAGBIO Magnolia biondii HOM05D006467 ORTHO05D008012 2.2e-27 125.9 129 48.1
Phvul.007G220100 Phaseolus vulgaris HOM05D006467 ORTHO05D008012 2.2e-27 125.9 128 50.8
vmacro20032 Vaccinium macrocarpon HOM05D006467 ORTHO05D008012 2.2e-27 125.9 159 46.5
Lalb_Chr21g0314871 Lupinus albus HOM05D006467 ORTHO05D008012 2.8e-27 125.6 128 51.6
arahy.Tifrunner.gnm1.ann1.HNS49Q Arachis hypogaea HOM05D006467 ORTHO05D008012 8.3e-27 124.0 122 52.5
arahy.Tifrunner.gnm1.ann1.RH0WXQ Arachis hypogaea HOM05D006467 ORTHO05D008012 8.3e-27 124.0 122 52.5
arahy.Tifrunner.gnm1.ann1.VPUZ6C Arachis hypogaea HOM05D006467 ORTHO05D008012 8.3e-27 124.0 122 52.5
Gohir.D04G113200 Gossypium hirsutum HOM05D006467 ORTHO05D008012 1.8e-26 122.9 98 63.3
Migut.J00532 Erythranthe guttata HOM05D006467 ORTHO05D008012 2.4e-26 122.5 131 52.7
CAN.G888.4 Capsicum annuum HOM05D006467 ORTHO05D008012 3.1e-26 122.1 123 52.8
SalBow8G4982 Salvia bowleyana HOM05D006467 ORTHO05D008012 4.1e-26 121.7 123 52.0
Dinv37285 Davidia involucrata HOM05D006467 ORTHO05D008012 1.3e-24 116.7 82 68.3
Haze_20589 Corylus avellana HOM05D006467 ORTHO05D008012 2.9e-24 115.5 88 62.5
Eucgr.K03249 Eucalyptus grandis HOM05D006467 ORTHO05D008012 5.0e-24 114.8 103 57.3
Cc06_g03930 Coffea canephora HOM05D006467 ORTHO05D008012 5.6e-23 111.3 109 50.5
DCAR_009295 Daucus carota HOM05D006467 ORTHO05D008012 3.6e-22 108.6 76 65.8
HPP92_022407 Vanilla planifolia HOM05D006467 ORTHO05D008012 3.0e-21 105.5 129 45.7
HPP92_027503 Vanilla planifolia HOM05D006467 ORTHO05D008012 4.0e-21 105.1 129 45.0
Hund20246 Selenicereus undatus HOM05D006467 ORTHO05D008012 1.2e-20 103.6 80 62.5
Psat6g070840 Pisum sativum HOM05D006467 ORTHO05D008012 2.2e-19 99.4 74 64.9
unitig_27.g25371 Utricularia gibba HOM05D006467 ORTHO05D008012 4.1e-18 95.1 86 50.0
Zm00001eb191980 Zea mays HOM05D006467 ORTHO05D008012 3.3e-15 85.5 126 39.7
ATR0048G054 Amborella trichopoda HOM05D006467 ORTHO05D008012 1.6e-14 83.2 87 49.4
FvH4_1g27957 Fragaria vesca HOM05D000871 ORTHO05D008012 3.6e-14 82.0 112 46.4
Os02g0805700 Oryza sativa ssp. japonica HOM05D006467 ORTHO05D008012 1.4e-13 80.1 118 37.3
Zm00001eb258270 Zea mays HOM05D006467 ORTHO05D008012 2.3e-13 79.3 126 37.3
FvH4_1g28030 Fragaria vesca HOM05D000871 ORTHO05D008012 2.6e-12 75.9 92 48.9
BcaC03g13318 Brassica carinata HOM05D006467 ORTHO05D008012 4.4e-12 75.1 95 45.3
BcaC03g13319 Brassica carinata HOM05D006467 ORTHO05D008012 4.4e-12 75.1 95 45.3
C07p17010 Brassica napus HOM05D006467 ORTHO05D008012 1.4e-10 70.1 89 44.9
C02p04540 Brassica napus HOM05D006467 ORTHO05D008012 2.4e-10 69.3 89 44.9
C06p12980 Brassica napus HOM05D006467 ORTHO05D008012 1.2e-09 67.0 86 45.3
BolC1t01590H Brassica oleracea HOM05D006467 ORTHO05D008012 2.0e-09 66.2 89 43.8
BcaC08g43911 Brassica carinata HOM05D006467 ORTHO05D008012 5.0e-08 61.6 47 63.8
PSO063G7135 Papaver somniferum HOM05D000530 ORTHO05D000621 1.2e-06 57.0 40 62.5
FAN26G0965 Fragaria x ananassa HOM05D000871 ORTHO05D011596 3.6e-06 55.5 66 45.5


User provided reference genes

Program Settings