Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 7.8e-70 266.9 127 100.0
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 1.4e-63 246.1 144 84.7
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 3.1e-58 228.4 127 84.3
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 9.2e-55 216.9 127 78.0
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 7.8e-54 213.8 128 81.2
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 1.3e-53 213.0 129 76.7
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 1.3e-53 213.0 127 75.6
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 3.0e-53 211.8 127 74.8
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 3.0e-53 211.8 127 76.4
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 3.0e-53 211.8 127 76.4
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 3.0e-53 211.8 128 75.0
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 3.9e-53 211.5 130 74.6
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 6.6e-53 210.7 128 75.0
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.5e-52 209.5 127 73.2
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 1.5e-52 209.5 127 75.6
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 3.3e-52 208.4 127 73.2
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 4.3e-52 208.0 127 72.4
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 4.3e-52 208.0 127 72.4
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 7.3e-52 207.2 127 71.7
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 9.6e-52 206.8 128 74.2
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 1.6e-51 206.1 129 73.6
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 3.6e-51 204.9 129 73.6
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 3.6e-51 204.9 128 72.7
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 4.7e-51 204.5 133 73.7
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 6.2e-51 204.1 129 74.4
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 8.1e-51 203.8 129 76.0
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 8.1e-51 203.8 127 73.2
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 1.1e-50 203.4 129 72.9
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 1.1e-50 203.4 124 76.6
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 1.4e-50 203.0 124 75.8
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 2.4e-50 202.2 128 74.2
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 5.2e-50 201.1 124 75.8
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 1.2e-49 199.9 118 76.3
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 2.0e-49 199.1 127 73.2
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 2.6e-49 198.7 127 72.4
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 2.6e-49 198.7 131 71.8
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 3.4e-49 198.4 129 72.9
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 3.4e-49 198.4 128 74.2
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 4.4e-49 198.0 127 68.5
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 4.4e-49 198.0 127 68.5
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 4.4e-49 198.0 129 70.5
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 7.6e-49 197.2 127 70.1
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 9.9e-49 196.8 127 72.4
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 1.7e-48 196.1 127 70.1
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 2.9e-48 195.3 127 66.9
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 2.9e-48 195.3 127 67.7
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 2.9e-48 195.3 127 67.7
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 3.8e-48 194.9 127 67.7
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 3.8e-48 194.9 127 66.9
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 4.9e-48 194.5 127 66.9
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 8.4e-48 193.7 128 67.2
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 8.4e-48 193.7 118 74.6
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 8.4e-48 193.7 117 75.2
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 1.1e-47 193.4 127 66.9
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 1.1e-47 193.4 127 66.9
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 1.1e-47 193.4 127 66.9
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 1.4e-47 193.0 128 71.1
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 1.4e-47 193.0 127 70.9
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 2.4e-47 192.2 126 72.2
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 4.2e-47 191.4 126 70.6
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 7.1e-47 190.7 129 70.5
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 9.3e-47 190.3 129 72.9
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 9.3e-47 190.3 126 70.6
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 9.3e-47 190.3 129 71.3
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 1.2e-46 189.9 136 68.4
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 1.6e-46 189.5 126 71.4
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 2.7e-46 188.7 129 68.2
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 3.5e-46 188.3 127 70.1
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 6.0e-46 187.6 127 70.1
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 7.8e-46 187.2 127 66.9
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 1.0e-45 186.8 128 66.4
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 1.7e-45 186.0 125 71.2
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 3.9e-45 184.9 120 68.3
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 6.6e-45 184.1 105 80.0
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 6.6e-45 184.1 118 71.2
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 8.7e-45 183.7 119 71.4
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 1.5e-44 183.0 171 57.3
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 2.5e-44 182.2 136 67.6
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 3.3e-44 181.8 118 71.2
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 4.3e-44 181.4 144 64.6
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 5.6e-44 181.0 127 66.1
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 7.3e-44 180.6 118 72.0
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 7.3e-44 180.6 128 67.2
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 1.8e-42 176.0 118 68.6
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 1.3e-40 169.9 107 73.8
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 4.9e-40 167.9 111 71.2
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 1.9e-39 166.0 114 64.0
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 1.9e-39 166.0 118 62.7
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 1.3e-37 159.8 109 68.8
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 5.1e-37 157.9 111 64.0
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 9.6e-36 153.7 127 61.4
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 6.2e-35 151.0 111 62.2
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 9.0e-34 147.1 102 63.7
Zm00001eb369960 Zea mays HOM05D006897 ORTHO05D008825 3.4e-33 145.2 122 52.5
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 6.4e-32 141.0 97 63.9
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 6.4e-32 141.0 104 58.7
Zm00001eb151640 Zea mays HOM05D006897 ORTHO05D008825 1.4e-31 139.8 122 51.6
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 1.2e-30 136.7 135 49.6
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 7.9e-30 134.0 89 67.4
Duzib106G0008 Durio zibethinus HOM05D006897 ORTHO05D008825 1.3e-29 133.3 77 77.9
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 1.8e-29 132.9 137 47.4
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 3.0e-29 132.1 132 49.2
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 5.6e-28 127.9 75 76.0
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 5.6e-28 127.9 96 63.5
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 3.7e-27 125.2 86 66.3
SalBow3G3382 Salvia bowleyana HOM05D006897 ORTHO05D008825 1.1e-26 123.6 130 49.2
Rhsim04G0141800 Rhododendron simsii HOM05D006897 ORTHO05D008825 1.4e-26 123.2 79 67.1
SEGI_02421 Sequoiadendron giganteum HOM05D006897 ORTHO05D008825 5.3e-26 121.3 105 50.5
SMO134G0180 Selaginella moellendorffii HOM05D006897 ORTHO05D008825 6.9e-26 120.9 131 48.1
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 1.5e-25 119.8 117 50.4
Actinidia32484 Actinidia chinensis HOM05D006897 ORTHO05D008825 1.6e-22 109.8 65 72.3
Peaxi162Scf00658g00012 Petunia axillaris HOM05D006897 ORTHO05D008825 3.9e-21 105.1 131 46.6
arahy.Tifrunner.gnm1.ann1.Y93F21 Arachis hypogaea HOM05D006897 ORTHO05D008825 2.5e-20 102.4 129 45.7
HPP92_010165 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.6e-17 92.4 69 59.4
Nitab4.5_0003762g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 3.0e-13 79.0 62 61.3
Sabra16G0184400 Salix brachista HOM05D004505 ORTHO05D005249 3.9e-13 78.6 43 83.7
Actinidia31321 Actinidia chinensis HOM05D006897 ORTHO05D008825 7.4e-12 74.3 58 63.8
Sabra04G0106300 Salix brachista HOM05D006897 ORTHO05D008825 1.3e-11 73.6 39 84.6
Rhsim04G0141900 Rhododendron simsii HOM05D006897 ORTHO05D008825 6.3e-11 71.2 51 66.7
MD15G1372000 Malus domestica HOM05D006897 ORTHO05D248129 6.1e-06 54.7 45 51.1


User provided reference genes

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