Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 2.4e-185 652.1 348 100.0
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 4.5e-168 594.7 354 90.7
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 3.7e-106 389.0 377 63.1
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 1.3e-95 354.0 390 57.2
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 7.3e-94 348.2 362 59.1
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 4.9e-90 335.5 374 55.3
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 6.4e-90 335.1 363 57.6
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 8.3e-90 334.7 373 56.0
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 4.1e-89 332.4 368 53.8
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 7.1e-89 331.6 451 49.9
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 9.2e-89 331.3 350 58.6
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 4.6e-88 328.9 230 73.9
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 4.6e-88 328.9 250 72.4
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 6.0e-88 328.6 406 53.2
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 7.8e-88 328.2 361 56.5
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 1.9e-86 323.6 364 53.6
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 5.6e-86 322.0 386 54.1
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.8e-85 319.7 376 54.5
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 6.2e-85 318.5 375 53.1
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.1e-84 317.8 376 54.0
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.1e-84 317.8 377 54.9
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 1.4e-84 317.4 407 49.9
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.4e-84 317.4 378 52.9
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 1.8e-84 317.0 376 54.3
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 4.0e-84 315.8 364 54.7
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 1.1e-81 307.8 362 51.7
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 4.1e-81 305.8 379 50.9
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 2.1e-80 303.5 374 50.0
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.7e-80 303.1 279 62.0
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.7e-80 303.1 313 58.8
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.5e-80 302.8 251 66.1
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 4.6e-80 302.4 367 51.8
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 4.6e-80 302.4 410 50.2
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.0e-80 302.0 279 61.6
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.0e-79 301.2 279 62.0
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 1.7e-79 300.4 260 60.4
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 1.7e-79 300.4 362 51.1
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 8.6e-79 298.1 369 50.4
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.1e-78 297.7 224 71.0
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 1.5e-78 297.4 383 52.5
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 1.5e-78 297.4 363 54.3
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 1.9e-78 297.0 398 48.2
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 3.3e-78 296.2 362 49.7
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 3.3e-78 296.2 231 68.4
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 4.3e-78 295.8 361 52.1
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 4.3e-78 295.8 370 50.5
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 5.6e-78 295.4 324 55.6
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 1.2e-77 294.3 359 52.6
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 2.1e-77 293.5 288 57.6
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 2.8e-77 293.1 225 69.3
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 4.7e-77 292.4 236 65.7
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 6.2e-77 292.0 341 53.7
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 8.1e-77 291.6 291 57.4
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.4e-76 290.8 393 50.4
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 4.0e-76 289.3 240 63.8
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 6.8e-76 288.5 375 51.2
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.2e-75 287.7 259 62.5
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 1.2e-75 287.7 259 62.2
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 2.0e-75 287.0 340 54.4
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 7.6e-75 285.0 335 52.8
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 7.6e-75 285.0 299 58.2
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 9.9e-75 284.6 358 50.3
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 9.9e-75 284.6 274 62.4
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 2.2e-74 283.5 365 49.6
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 9.3e-73 278.1 387 46.0
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 2.1e-72 276.9 334 49.1
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 1.3e-71 274.2 276 59.4
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 3.0e-71 273.1 382 49.0
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 2.4e-68 263.5 316 51.9
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 6.9e-68 261.9 236 61.9
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 1.5e-67 260.8 335 50.4
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 4.4e-67 259.2 231 61.9
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 5.8e-67 258.8 217 65.4
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 7.6e-67 258.5 329 50.2
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 9.9e-67 258.1 329 50.2
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 9.9e-67 258.1 330 47.3
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 1.3e-66 257.7 285 56.5
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 4.9e-66 255.8 360 46.9
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 6.4e-66 255.4 257 57.6
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 6.4e-66 255.4 309 51.1
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 8.4e-66 255.0 251 59.8
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 8.4e-66 255.0 245 59.6
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 3.2e-65 253.1 224 64.7
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 3.2e-65 253.1 315 52.1
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 4.2e-65 252.7 356 48.9
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 1.2e-64 251.1 360 46.9
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 6.0e-64 248.8 273 54.2
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 7.9e-64 248.4 333 48.0
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 2.5e-62 243.4 329 47.7
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 5.6e-62 242.3 329 47.4
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 7.4e-62 241.9 225 57.3
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 2.1e-61 240.4 206 66.5
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 2.1e-61 240.4 196 65.3
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 5.3e-60 235.7 314 46.5
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 3.4e-59 233.0 239 58.6
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 3.9e-55 219.5 239 46.9
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 2.8e-53 213.4 192 64.6
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 8.1e-53 211.8 226 54.9
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.8e-52 210.7 249 56.2
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.0e-50 204.9 155 72.3
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 6.5e-50 202.2 325 45.2
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 8.4e-50 201.8 190 60.5
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 2.1e-48 197.2 273 51.3
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 3.5e-48 196.4 182 61.0
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 3.0e-39 166.8 177 54.8
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 8.2e-37 158.7 224 42.0
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.2e-35 154.8 198 49.0
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 7.7e-35 152.1 231 46.3
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.5e-33 147.1 175 54.3
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.5e-30 137.9 172 50.6
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 3.3e-30 136.7 99 67.7
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 2.0e-27 127.5 137 56.9
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 4.8e-21 106.3 170 32.9
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 1.6e-19 101.3 226 31.0
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 1.1e-17 95.1 61 77.0
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 2.0e-14 84.3 76 55.3
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 8.2e-13 79.0 56 69.6
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 5.3e-12 76.3 209 31.6
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 1.1e-09 68.6 165 30.3
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 3.0e-07 60.5 146 35.6
Eucgr.E03158 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.0e-06 57.8 87 46.0
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 5.7e-06 56.2 116 37.9


User provided reference genes

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