Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G103600 Populus trichocarpa HOM05D008779 ORTHO05D010486 1.7e-77 292.7 166 100.0
Potri.016G124000 Populus trichocarpa HOM05D008779 ORTHO05D010486 2.3e-29 132.9 146 60.3
Sabra16G0118800 Salix brachista HOM05D008779 ORTHO05D010486 1.9e-23 113.2 169 52.1
QL07p034176 Quercus lobata HOM05D008779 ORTHO05D010486 4.6e-14 82.0 193 35.8
FAN09G1051 Fragaria x ananassa HOM05D008779 ORTHO05D010486 2.3e-13 79.7 196 34.7
FAN05G2483 Fragaria x ananassa HOM05D008779 ORTHO05D010486 6.7e-13 78.2 196 34.7
CiPaw.09G213700 Carya illinoinensis HOM05D008779 ORTHO05D010486 8.8e-13 77.8 197 40.1
FAN05G1839 Fragaria x ananassa HOM05D008779 ORTHO05D010486 2.0e-12 76.6 196 34.2
Gorai.012G118400 Gossypium raimondii HOM05D020259 ORTHO05D010486 2.0e-12 76.6 180 38.3
RcHm_v2.0_Chr3g0461831 Rosa chinensis HOM05D008779 ORTHO05D010486 2.5e-12 76.3 129 41.1
FvH4_6g10791 Fragaria vesca HOM05D008779 ORTHO05D010486 1.3e-11 73.9 196 32.7
Ciclev10013473m.g Citrus clementina HOM05D008779 ORTHO05D010486 1.7e-11 73.6 191 34.6
Gohir.D04G134800 Gossypium hirsutum HOM05D020259 ORTHO05D010486 2.8e-11 72.8 180 36.7
Solyc09g015450.3 Solanum lycopersicum HOM05D020890 ORTHO05D010486 3.7e-11 72.4 146 33.6
Sopen09g009150 Solanum pennellii HOM05D020890 ORTHO05D010486 4.8e-11 72.0 146 32.2
PGSC0003DMG400029193 Solanum tuberosum HOM05D020890 ORTHO05D010486 1.1e-10 70.9 115 39.1
CSS0011066 Camellia sinensis var. sinensis HOM05D008779 ORTHO05D010486 1.4e-10 70.5 209 40.7
Lj1g0021194 Lotus japonicus HOM05D008779 ORTHO05D010486 6.9e-10 68.2 207 31.9
Duzib106G0962 Durio zibethinus HOM05D020259 ORTHO05D010486 1.5e-09 67.0 198 34.8
Manes.09G110400 Manihot esculenta HOM05D008779 ORTHO05D010486 2.6e-09 66.2 168 41.1
Thecc.05G008600 Theobroma cacao HOM05D020259 ORTHO05D010486 2.6e-09 66.2 212 35.8
Oeu038727.1 Olea europaea HOM05D008779 ORTHO05D010486 1.3e-08 63.9 183 32.8
CANSAT35G0132 Cannabis sativa HOM05D008779 ORTHO05D010486 2.2e-08 63.2 184 34.8
Gohir.A04G095028 Gossypium hirsutum HOM05D020259 ORTHO05D010486 2.2e-08 63.2 180 34.4
Psat3g124920 Pisum sativum HOM05D008779 ORTHO05D010486 2.9e-08 62.8 73 49.3
Glyma.18G205400 Glycine max HOM05D008779 ORTHO05D010486 6.5e-08 61.6 175 34.3
Sed0012464 Sechium edule HOM05D030421 ORTHO05D029000 6.5e-08 61.6 38 78.9
Nitab4.5_0000230g0080 Nicotiana tabacum HOM05D020890 ORTHO05D010486 2.5e-07 59.7 42 64.3
MSTRG.26830 Avicennia marina HOM05D008779 ORTHO05D010486 3.2e-07 59.3 102 39.2
Ca_07682_v3 Cicer arietinum L. HOM05D008779 ORTHO05D010486 4.2e-07 58.9 193 29.5
TWI53G1291 Tripterygium wilfordii HOM05D008779 ORTHO05D010486 4.2e-07 58.9 196 32.7
Glyma.07G154700 Glycine max HOM05D008779 ORTHO05D010486 5.5e-07 58.5 75 44.0
Prupe.6G283500 Prunus persica HOM05D008779 ORTHO05D010486 5.5e-07 58.5 224 31.7
SGA_v2.0_scaffold110G31193 Striga asiatica HOM05D008779 ORTHO05D010486 5.5e-07 58.5 194 30.9
MD12G1178300 Malus domestica HOM05D008779 ORTHO05D010486 9.4e-07 57.8 69 50.7
VMungo1383G2541 Vigna mungo HOM05D008779 ORTHO05D010486 1.2e-06 57.4 49 55.1
ClCG04G006770 Citrullus lanatus HOM05D030421 ORTHO05D029000 2.7e-06 56.2 35 80.0
CsaV3_4G026490 Cucumis sativus L. HOM05D030421 ORTHO05D029000 2.7e-06 56.2 99 38.4
Phvul.008G094100 Phaseolus vulgaris HOM05D008779 ORTHO05D010486 2.7e-06 56.2 75 44.0
MELO3C026015.2 Cucumis melo HOM05D030421 ORTHO05D029000 4.7e-06 55.5 99 40.4
PGR031G3087 Punica granatum HOM05D008779 ORTHO05D010486 6.1e-06 55.1 35 68.6
Cc06_g00910 Coffea canephora HOM05D008779 ORTHO05D010486 7.9e-06 54.7 174 33.9


User provided reference genes

Program Settings