Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G101901 Populus trichocarpa HOM05D007530 ORTHO05D009556 8.3e-32 139.8 73 100.0
Potri.016G118800 Populus trichocarpa HOM05D007530 ORTHO05D009556 1.1e-28 129.4 73 91.8
Manes.08G093800 Manihot esculenta HOM05D007530 ORTHO05D009556 7.2e-28 126.7 73 86.3
Manes.09G107300 Manihot esculenta HOM05D007530 ORTHO05D009556 1.2e-27 125.9 73 86.3
Sabra06G0078200 Salix brachista HOM05D007530 ORTHO05D009556 1.0e-26 122.9 66 93.9
TAR623G0260 Trochodendron aralioides HOM05D007530 ORTHO05D009556 1.7e-24 115.5 71 78.9
Nn2g13162 Nelumbo nucifera HOM05D007530 ORTHO05D009556 2.2e-24 115.2 71 78.9
Duzib093G1475 Durio zibethinus HOM05D007530 ORTHO05D009556 2.8e-24 114.8 71 83.1
GSVIVG01011181001 Vitis vinifera HOM05D007530 ORTHO05D009556 4.9e-24 114.0 71 80.3
CANSAT35G1517 Cannabis sativa HOM05D007530 ORTHO05D009556 1.1e-23 112.8 70 78.6
CiPaw.10G157500 Carya illinoinensis HOM05D007530 ORTHO05D009556 1.4e-23 112.5 71 76.1
Glyma.16G098900 Glycine max HOM05D007530 ORTHO05D009556 1.4e-23 112.5 72 80.6
Sed0024664 Sechium edule HOM05D007530 ORTHO05D009556 2.4e-23 111.7 71 78.9
Glyma.07G152100 Glycine max HOM05D007530 ORTHO05D009556 3.1e-23 111.3 72 80.6
Ca_07655_v3 Cicer arietinum L. HOM05D007530 ORTHO05D009556 4.1e-23 110.9 71 77.5
Glyma.18G203200 Glycine max HOM05D007530 ORTHO05D009556 5.4e-23 110.5 72 77.8
MBI15_g24380_MAGBIO Magnolia biondii HOM05D007530 ORTHO05D009556 9.1e-23 109.8 71 77.5
CsaV3_3G033590 Cucumis sativus L. HOM05D007530 ORTHO05D009556 1.2e-22 109.4 70 77.1
Duzib106G1059 Durio zibethinus HOM05D007530 ORTHO05D009556 1.2e-22 109.4 71 78.9
arahy.Tifrunner.gnm1.ann1.88RA0A Arachis hypogaea HOM05D007530 ORTHO05D009556 2.0e-22 108.6 72 76.4
Phvul.008G096700 Phaseolus vulgaris HOM05D007530 ORTHO05D009556 4.5e-22 107.5 70 78.6
CSS0025168 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 5.9e-22 107.1 66 78.8
Prupe.6G279800 Prunus persica HOM05D007530 ORTHO05D009556 5.9e-22 107.1 72 76.4
Migut.L02025 Erythranthe guttata HOM05D007530 ORTHO05D009556 7.7e-22 106.7 69 75.4
Gohir.A04G092400 Gossypium hirsutum HOM05D007530 ORTHO05D009556 7.7e-22 106.7 65 80.0
Gohir.D04G131700 Gossypium hirsutum HOM05D007530 ORTHO05D009556 7.7e-22 106.7 65 80.0
Rhsim05G0217200 Rhododendron simsii HOM05D000043 ORTHO05D005398 7.7e-22 106.7 66 78.8
Lalb_Chr01g0023151 Lupinus albus HOM05D007530 ORTHO05D009556 1.0e-21 106.3 67 76.1
ClCG10G022290 Citrullus lanatus HOM05D007530 ORTHO05D009556 1.3e-21 105.9 66 78.8
MELO3C009149.2 Cucumis melo HOM05D007530 ORTHO05D009556 1.3e-21 105.9 70 74.3
Psat3g126880 Pisum sativum HOM05D007530 ORTHO05D009556 1.3e-21 105.9 71 73.2
Medtr7g068940 Medicago truncatula HOM05D007530 ORTHO05D009556 1.7e-21 105.5 73 71.2
Sc01g0006890 Simmondsia chinensis HOM05D007530 ORTHO05D009556 1.7e-21 105.5 71 71.8
Gorai.012G115500 Gossypium raimondii HOM05D007530 ORTHO05D009556 2.3e-21 105.1 64 79.7
arahy.Tifrunner.gnm1.ann1.ZMF41F Arachis hypogaea HOM05D007530 ORTHO05D009556 3.8e-21 104.4 72 73.6
Hma1.2p1_0362F.1_g136440 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 3.8e-21 104.4 64 79.7
Sopen10g034690 Solanum pennellii HOM05D007530 ORTHO05D009556 3.8e-21 104.4 69 68.1
Thecc.05G013400 Theobroma cacao HOM05D007530 ORTHO05D009556 3.8e-21 104.4 67 74.6
SalBow4G2966 Salvia bowleyana HOM05D007530 ORTHO05D009556 5.0e-21 104.0 69 76.8
Hund10987 Selenicereus undatus HOM05D007530 ORTHO05D009556 6.6e-21 103.6 72 70.8
Nitab4.5_0003514g0010 Nicotiana tabacum HOM05D007530 ORTHO05D009556 8.6e-21 103.2 69 69.6
Solyc10g085215.1 Solanum lycopersicum HOM05D007530 ORTHO05D009556 8.6e-21 103.2 69 66.7
Nitab4.5_0000444g0050 Nicotiana tabacum HOM05D007530 ORTHO05D009556 1.5e-20 102.4 69 69.6
PGR142G0763 Punica granatum HOM05D007530 ORTHO05D009556 1.5e-20 102.4 67 71.6
Aa31LG5G18900 Aethionema arabicum HOM05D007530 ORTHO05D009556 4.2e-20 100.9 71 67.6
CDE12G0911 Ceratophyllum demersum HOM05D003492 ORTHO05D005115 5.5e-20 100.5 69 71.0
PGSC0003DMG400011024 Solanum tuberosum HOM05D007530 ORTHO05D009556 5.5e-20 100.5 69 65.2
THA.LOC109117252 Tarenaya hassleriana HOM05D007530 ORTHO05D009556 5.5e-20 100.5 69 66.7
arahy.Tifrunner.gnm1.ann1.R0LR40 Arachis hypogaea HOM05D007530 ORTHO05D009556 7.2e-20 100.1 66 72.7
unitig_37.g12653 Utricularia gibba HOM05D007530 ORTHO05D009556 7.2e-20 100.1 70 64.3
Aa31LG1G23010 Aethionema arabicum HOM05D007530 ORTHO05D009556 9.5e-20 99.8 71 70.4
PSO384G0267 Papaver somniferum HOM05D007530 ORTHO05D009556 1.2e-19 99.4 62 79.0
Thhalv10015199m.g Eutrema salsugineum HOM05D007530 ORTHO05D009556 6.1e-19 97.1 69 68.1
Lalb_Chr19g0124461 Lupinus albus HOM05D007530 ORTHO05D009556 6.1e-19 97.1 61 77.0
MD12G1171600 Malus domestica HOM05D007530 ORTHO05D009556 8.0e-19 96.7 71 73.2
PGSC0003DMG400019174 Solanum tuberosum HOM05D007530 ORTHO05D009556 1.0e-18 96.3 69 65.2
EL10Ac5g12543 Beta vulgaris HOM05D007530 ORTHO05D009556 1.8e-18 95.5 73 63.0
Nitab4.5_0004107g0030 Nicotiana tabacum HOM05D007530 ORTHO05D009556 1.8e-18 95.5 64 67.2
COL.COLO4_14508 Corchorus olitorius HOM05D002620 ORTHO05D006469 2.3e-18 95.1 62 72.6
Nitab4.5_0000770g0040 Nicotiana tabacum HOM05D007530 ORTHO05D009556 2.3e-18 95.1 64 65.6
RcHm_v2.0_Chr3g0462691 Rosa chinensis HOM05D007530 ORTHO05D009556 2.3e-18 95.1 63 68.3
Sp6g40660 Schrenkiella parvula HOM05D007530 ORTHO05D009556 2.3e-18 95.1 67 68.7
Carub.0006s0047 Capsella rubella HOM05D007530 ORTHO05D009556 4.0e-18 94.4 69 65.2
FAN02G2108 Fragaria x ananassa HOM05D007530 ORTHO05D009556 6.8e-18 93.6 70 64.3
FAN05G2692 Fragaria x ananassa HOM05D007530 ORTHO05D009556 8.9e-18 93.2 62 67.7
HanXRQChr10g0294071 Helianthus annuus HOM05D007530 ORTHO05D009556 8.9e-18 93.2 67 64.2
BcaB01g06225 Brassica carinata HOM05D007530 ORTHO05D009556 1.2e-17 92.8 67 65.7
Haze_21023 Corylus avellana HOM05D002620 ORTHO05D006469 1.5e-17 92.4 88 58.0
FvH4_6g11210 Fragaria vesca HOM05D007530 ORTHO05D009556 2.0e-17 92.0 69 63.8
FAN09G3168 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.0e-17 92.0 69 63.8
FAN14G2496 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.0e-17 92.0 69 63.8
FAN14G3881 Fragaria x ananassa HOM05D007530 ORTHO05D009556 2.0e-17 92.0 69 63.8
CARHR211730 Cardamine hirsuta HOM05D007530 ORTHO05D009556 2.6e-17 91.7 67 64.2
TWI74G1090 Tripterygium wilfordii HOM05D007530 ORTHO05D009556 2.6e-17 91.7 67 65.7
AT5G01350 Arabidopsis thaliana HOM05D007530 ORTHO05D009556 7.5e-17 90.1 67 62.7
ECA247G1901 Erigeron canadensis HOM05D007530 ORTHO05D009556 7.5e-17 90.1 67 62.7
HPP92_021352 Vanilla planifolia HOM05D007530 ORTHO05D009556 7.5e-17 90.1 66 65.2
AL6G10780 Arabidopsis lyrata HOM05D007530 ORTHO05D009556 1.7e-16 89.0 67 61.2
A03p00350 Brassica napus HOM05D000406 ORTHO05D006918 2.8e-16 88.2 64 65.6
C03p00510 Brassica napus HOM05D000406 ORTHO05D006918 2.8e-16 88.2 68 63.2
BolC3t12617H Brassica oleracea HOM05D000406 ORTHO05D006918 2.8e-16 88.2 68 63.2
BraA03t09426Z Brassica rapa HOM05D000406 ORTHO05D006918 2.8e-16 88.2 64 65.6
HPP92_021347 Vanilla planifolia HOM05D007530 ORTHO05D009556 1.1e-15 86.3 66 62.1
ATR0681G213 Amborella trichopoda HOM05D007530 ORTHO05D009556 3.5e-14 81.3 70 60.0
TPR.G2527 Trifolium pratense HOM05D007530 ORTHO05D009556 1.0e-13 79.7 71 62.0
Eucgr.G03069 Eucalyptus grandis HOM05D007530 ORTHO05D009556 2.3e-13 78.6 46 73.9
Cc06_g01140 Coffea canephora HOM05D007530 ORTHO05D009556 8.6e-13 76.6 42 81.0
vmacro20294 Vaccinium macrocarpon HOM05D007530 ORTHO05D009556 5.6e-12 73.9 46 76.1
Aqoxy2G00850 Aquilegia oxysepala HOM05D007530 ORTHO05D009556 7.3e-12 73.6 71 46.5
Mapoly0015s0144 Marchantia polymorpha HOM05D007530 ORTHO05D009556 9.5e-12 73.2 69 53.6
Sabra16G0114900 Salix brachista HOM05D007530 ORTHO05D000135 1.6e-11 72.4 67 64.2
Zm00001eb426270 Zea mays HOM05D007530 ORTHO05D009556 4.7e-11 70.9 69 52.2
Os04g0508100 Oryza sativa ssp. japonica HOM05D007530 ORTHO05D009556 8.0e-11 70.1 67 50.7
CSS0006801 Camellia sinensis var. sinensis HOM05D007530 ORTHO05D009556 1.0e-10 69.7 45 75.6
Peaxi162Scf00014g00124 Petunia axillaris HOM05D007530 ORTHO05D009556 5.2e-10 67.4 46 69.6
Pp3c21_22550 Physcomitrium patens HOM05D007530 ORTHO05D009556 1.5e-09 65.9 61 50.8
Cpa.g.sc11.95 Carica papaya HOM05D007530 ORTHO05D009556 2.6e-09 65.1 42 69.0
Lsat_1_v5_gn_9_35161 Lactuca sativa HOM05D007530 ORTHO05D009556 2.6e-09 65.1 46 63.0
CAN.G243.17 Capsicum annuum HOM05D007530 ORTHO05D009556 4.4e-09 64.3 46 63.0
AagrBONN_evm.TU.Sc2ySwM_117.3278 Anthoceros agrestis HOM05D007530 ORTHO05D009556 2.9e-08 61.6 64 45.3
arahy.Tifrunner.gnm1.ann1.K2ZES1 Arachis hypogaea HOM05D008645 ORTHO05D009556 8.3e-08 60.1 46 67.4
Oeu033582.2 Olea europaea HOM05D007530 ORTHO05D009556 2.4e-07 58.5 54 57.4
Lj1g0004890 Lotus japonicus HOM05D007530 ORTHO05D009556 3.2e-07 58.2 41 65.9
Zm00001eb077870 Zea mays HOM05D007530 ORTHO05D009556 1.2e-06 56.2 37 73.0
Hma1.2p1_0024F.1_g016010 Hydrangea macrophylla HOM05D007530 ORTHO05D009556 1.6e-06 55.8 49 59.2


User provided reference genes

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