Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G095100 Populus trichocarpa HOM05D008789 ORTHO05D010785 7.5e-92 340.5 172 100.0
Potri.006G095200 Populus trichocarpa HOM05D008789 ORTHO05D010785 6.2e-86 320.9 172 95.3
Sabra06G0073100 Salix brachista HOM05D000076 ORTHO05D001377 2.3e-40 169.5 156 64.1
Potri.014G065600 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.2e-36 157.1 165 53.3
Potri.014G061800 Populus trichocarpa HOM05D008789 ORTHO05D010785 2.6e-36 156.0 155 56.8
Potri.014G065900 Populus trichocarpa HOM05D008789 ORTHO05D010785 5.8e-36 154.8 161 53.4
Potri.014G061500 Populus trichocarpa HOM05D008789 ORTHO05D010785 3.8e-35 152.1 130 60.0
Potri.014G065250 Populus trichocarpa HOM05D008789 ORTHO05D010785 4.9e-35 151.8 167 52.1
Potri.001G407500 Populus trichocarpa HOM05D008789 ORTHO05D010785 6.5e-35 151.4 166 53.0
Potri.001G407401 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.1e-34 150.6 166 53.0
Sabra14G0045300 Salix brachista HOM05D008789 ORTHO05D010785 1.3e-32 143.7 157 52.9
Potri.014G065700 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.8e-32 143.3 134 58.2
Sabra14G0045800 Salix brachista HOM05D008789 ORTHO05D010785 9.7e-31 137.5 133 56.4
Sabra16G0267600 Salix brachista HOM05D008789 ORTHO05D010785 3.7e-30 135.6 160 52.5
Sabra13G0031400 Salix brachista HOM05D008789 ORTHO05D010785 4.1e-29 132.1 158 50.0
Potri.014G065100 Populus trichocarpa HOM05D008789 ORTHO05D010785 5.3e-29 131.7 130 56.9
Sabra16G0269400 Salix brachista HOM05D008789 ORTHO05D010785 5.3e-29 131.7 165 50.3
Sabra13G0031000 Salix brachista HOM05D008789 ORTHO05D010785 6.9e-29 131.3 129 57.4
Sabra13G0031200 Salix brachista HOM05D008789 ORTHO05D010785 3.4e-28 129.0 158 49.4
Sabra16G0267200 Salix brachista HOM05D008789 ORTHO05D010785 1.0e-27 127.5 152 49.3
Sabra16G0269100 Salix brachista HOM05D008789 ORTHO05D010785 5.0e-27 125.2 152 48.7
Potri.014G064900 Populus trichocarpa HOM05D008789 ORTHO05D010785 5.5e-26 121.7 133 49.6
Sabra16G0268800 Salix brachista HOM05D008789 ORTHO05D010785 7.2e-26 121.3 149 47.7
Sabra16G0271000 Salix brachista HOM05D008789 ORTHO05D010785 7.2e-26 121.3 149 47.7
Potri.014G065000 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.5e-23 113.6 108 57.4
Potri.014G061700 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.9e-23 113.2 108 57.4
Potri.014G061600 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.7e-22 110.2 101 55.4
Potri.014G063350 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.7e-22 110.2 98 57.1
Potri.014G065200 Populus trichocarpa HOM05D008789 ORTHO05D010785 2.8e-22 109.4 101 56.4
Sabra14G0045600 Salix brachista HOM05D008789 ORTHO05D010785 2.4e-21 106.3 101 56.4
Potri.014G065300 Populus trichocarpa HOM05D008789 ORTHO05D010785 4.1e-21 105.5 100 55.0
Sabra14G0045400 Salix brachista HOM05D008789 ORTHO05D010785 1.2e-20 104.0 101 55.4
Potri.014G065500 Populus trichocarpa HOM05D008789 ORTHO05D010785 1.5e-20 103.6 93 58.1
Sabra14G0045500 Salix brachista HOM05D008789 ORTHO05D010785 1.5e-15 87.0 93 49.5
Sabra13G0031600 Salix brachista HOM05D008789 ORTHO05D010785 4.4e-15 85.5 82 54.9
Sabra14G0045900 Salix brachista HOM05D008789 ORTHO05D010785 4.4e-15 85.5 96 49.0
Potri.014G065951 Populus trichocarpa HOM05D008789 ORTHO05D010785 9.7e-15 84.3 89 52.8
Sabra13G0030900 Salix brachista HOM05D008789 ORTHO05D010785 4.8e-14 82.0 119 47.9
Sabra13G0031900 Salix brachista HOM05D008789 ORTHO05D010785 1.3e-11 73.9 88 47.7
Thecc.10G017000 Theobroma cacao HOM05D009631 ORTHO05D011824 3.8e-11 72.4 137 30.7
Thecc.10G017200 Theobroma cacao HOM05D009631 ORTHO05D011824 3.8e-11 72.4 137 31.4
COL.COLO4_09669 Corchorus olitorius HOM05D019273 ORTHO05D020506 5.0e-11 72.0 146 31.5
Ciclev10013523m.g Citrus clementina HOM05D019503 ORTHO05D010785 2.5e-10 69.7 130 38.5
Manes.05G049300 Manihot esculenta HOM05D008789 ORTHO05D010785 7.2e-10 68.2 124 33.1
Thecc.06G016000 Theobroma cacao HOM05D009631 ORTHO05D011824 7.2e-10 68.2 144 31.2
Thecc.10G017600 Theobroma cacao HOM05D009631 ORTHO05D011824 1.4e-08 63.9 121 33.9
Thecc.01G384000 Theobroma cacao HOM05D019503 ORTHO05D010785 2.3e-08 63.2 111 35.1
Gorai.011G287200 Gossypium raimondii HOM05D009631 ORTHO05D011824 3.9e-08 62.4 114 32.5
Gorai.011G287500 Gossypium raimondii HOM05D009631 ORTHO05D011824 5.2e-08 62.0 114 32.5
Gorai.011G287300 Gossypium raimondii HOM05D009631 ORTHO05D011824 8.8e-08 61.2 114 31.6
Thecc.10G017700 Theobroma cacao HOM05D009631 ORTHO05D011824 8.8e-08 61.2 132 31.1
Glyma.01G076700 Glycine max HOM05D019503 ORTHO05D010785 2.6e-07 59.7 111 30.6
Gorai.011G287400 Gossypium raimondii HOM05D009631 ORTHO05D011824 4.4e-07 58.9 112 33.9
QL07p007766 Quercus lobata HOM05D014023 ORTHO05D011719 9.7e-07 57.8 115 37.4
Thecc.01G384100 Theobroma cacao HOM05D019503 ORTHO05D010785 1.3e-06 57.4 112 33.0
Gohir.D10G248725 Gossypium hirsutum HOM05D009631 ORTHO05D011824 2.8e-06 56.2 117 31.6
Gorai.011G287100 Gossypium raimondii HOM05D009631 ORTHO05D011824 2.8e-06 56.2 104 36.5
Gohir.D10G248750 Gossypium hirsutum HOM05D009631 ORTHO05D011824 3.7e-06 55.8 117 31.6
Manes.10G145500 Manihot esculenta HOM05D008789 ORTHO05D010785 4.8e-06 55.5 109 29.4
Gorai.011G287000 Gossypium raimondii HOM05D009631 ORTHO05D011824 8.2e-06 54.7 107 33.6


User provided reference genes

Program Settings