Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G087701 Populus trichocarpa HOM05D007348 ORTHO05D009257 5.3e-72 274.2 138 100.0
Sabra06G0067000 Salix brachista HOM05D007348 ORTHO05D009257 2.8e-65 251.9 138 91.3
CANSAT35G0511 Cannabis sativa HOM05D007348 ORTHO05D009257 2.2e-46 189.1 140 71.4
Manes.08G081300 Manihot esculenta HOM05D007348 ORTHO05D009257 3.8e-46 188.3 138 73.9
CSS0018490 Camellia sinensis var. sinensis HOM05D007348 ORTHO05D009257 3.6e-44 181.8 141 70.2
TWI77G0545 Tripterygium wilfordii HOM05D007348 ORTHO05D009257 3.6e-44 181.8 113 82.3
Dinv37151 Davidia involucrata HOM05D007348 ORTHO05D009257 1.4e-43 179.9 144 69.4
QL07p048913 Quercus lobata HOM05D007348 ORTHO05D009257 1.4e-43 179.9 138 68.8
SGA_v2.0_scaffold94G28573 Striga asiatica HOM05D007348 ORTHO05D009257 3.4e-42 175.3 138 69.6
Cc06_g02390 Coffea canephora HOM05D007348 ORTHO05D009257 4.4e-42 174.9 142 67.6
COL.COLO4_14769 Corchorus olitorius HOM05D007348 ORTHO05D009257 4.4e-42 174.9 140 70.7
Prupe.6G258300 Prunus persica HOM05D007348 ORTHO05D009257 4.4e-42 174.9 106 83.0
vmacro20175 Vaccinium macrocarpon HOM05D007348 ORTHO05D009257 5.7e-42 174.5 140 67.9
Cfa017345 Carpinus fangiana HOM05D007348 ORTHO05D009257 9.8e-42 173.7 143 69.2
Ciclev10013090m.g Citrus clementina HOM05D007348 ORTHO05D009257 2.8e-41 172.2 140 66.4
Nitab4.5_0000527g0200 Nicotiana tabacum HOM05D007348 ORTHO05D009257 4.8e-41 171.4 116 78.4
TAR636G0176 Trochodendron aralioides HOM05D007348 ORTHO05D009257 6.3e-41 171.0 138 66.7
Gorai.006G171200 Gossypium raimondii HOM05D007348 ORTHO05D009257 8.3e-41 170.6 139 66.9
Actinidia11269 Actinidia chinensis HOM05D007348 ORTHO05D009257 1.1e-40 170.2 139 66.9
CiPaw.09G195200 Carya illinoinensis HOM05D007348 ORTHO05D009257 1.4e-40 169.9 118 75.4
Migut.L01962 Erythranthe guttata HOM05D007348 ORTHO05D009257 1.4e-40 169.9 125 72.8
Gohir.A09G154300 Gossypium hirsutum HOM05D007348 ORTHO05D009257 1.4e-40 169.9 139 66.2
Oeu006894.1 Olea europaea HOM05D007348 ORTHO05D009257 1.8e-40 169.5 139 66.2
Nitab4.5_0008097g0010 Nicotiana tabacum HOM05D007348 ORTHO05D009257 2.4e-40 169.1 116 77.6
TAR636G2125 Trochodendron aralioides HOM05D007348 ORTHO05D009257 3.1e-40 168.7 138 65.9
MBI14_g08036_MAGBIO Magnolia biondii HOM05D007348 ORTHO05D009257 4.1e-40 168.3 138 67.4
PGR004G1504 Punica granatum HOM05D007348 ORTHO05D009257 4.1e-40 168.3 92 91.3
Cpa.g.sc169.14 Carica papaya HOM05D007348 ORTHO05D009257 7.0e-40 167.5 98 83.7
Gohir.D09G150000 Gossypium hirsutum HOM05D007348 ORTHO05D009257 7.0e-40 167.5 139 66.2
Thecc.05G036200 Theobroma cacao HOM05D007348 ORTHO05D009257 7.0e-40 167.5 142 65.5
PGSC0003DMG400019150 Solanum tuberosum HOM05D007348 ORTHO05D009257 9.1e-40 167.2 126 69.8
CAN.G92.20 Capsicum annuum HOM05D007348 ORTHO05D009257 2.0e-39 166.0 106 80.2
MD12G1144800 Malus domestica HOM05D007348 ORTHO05D009257 2.0e-39 166.0 92 87.0
Eucgr.K03108 Eucalyptus grandis HOM05D007348 ORTHO05D009257 2.7e-39 165.6 138 66.7
LjContig00141g0000939 Lotus japonicus HOM05D007348 ORTHO05D009257 3.5e-39 165.2 138 68.1
ClCG10G021280 Citrullus lanatus HOM05D007348 ORTHO05D009257 4.5e-39 164.9 122 68.9
Migut.J00309 Erythranthe guttata HOM05D007348 ORTHO05D009257 5.9e-39 164.5 95 84.2
Peaxi162Scf00330g00089 Petunia axillaris HOM05D007348 ORTHO05D009257 5.9e-39 164.5 132 68.2
Atru.chr8.2007 Acer truncatum HOM05D007348 ORTHO05D009257 1.3e-38 163.3 95 85.3
ATR0559G267 Amborella trichopoda HOM05D007348 ORTHO05D009257 1.3e-38 163.3 135 65.2
Glyma.07G134500 Glycine max HOM05D007348 ORTHO05D009257 1.3e-38 163.3 141 61.0
Sopen10g035960 Solanum pennellii HOM05D007348 ORTHO05D009257 1.3e-38 163.3 94 84.0
ECA247G0870 Erigeron canadensis HOM05D007348 ORTHO05D009257 1.7e-38 162.9 139 63.3
RcHm_v2.0_Chr3g0466241 Rosa chinensis HOM05D007348 ORTHO05D009257 1.7e-38 162.9 106 77.4
Lsat_1_v5_gn_9_32101 Lactuca sativa HOM05D007348 ORTHO05D009257 2.2e-38 162.5 138 63.8
unitig_21.g21015 Utricularia gibba HOM05D007348 ORTHO05D009257 2.9e-38 162.2 138 65.2
GSVIVG01034135001 Vitis vinifera HOM05D007348 ORTHO05D009257 2.9e-38 162.2 138 65.2
Haze_20824 Corylus avellana HOM05D007348 ORTHO05D009257 3.8e-38 161.8 160 61.2
MD04G1131700 Malus domestica HOM05D007348 ORTHO05D009257 3.8e-38 161.8 92 84.8
SEGI_32371 Sequoiadendron giganteum HOM05D007348 ORTHO05D009257 8.5e-38 160.6 109 75.2
Aqoxy1G00895 Aquilegia oxysepala HOM05D007348 ORTHO05D009257 1.1e-37 160.2 146 61.6
HanXRQChr10g0298181 Helianthus annuus HOM05D007348 ORTHO05D009257 1.1e-37 160.2 139 64.7
Hund09099 Selenicereus undatus HOM05D007348 ORTHO05D009257 1.1e-37 160.2 90 87.8
Nn2g13409 Nelumbo nucifera HOM05D007348 ORTHO05D009257 1.9e-37 159.5 146 62.3
Sed0022418 Sechium edule HOM05D007348 ORTHO05D009257 1.9e-37 159.5 92 84.8
CDE04G2102 Ceratophyllum demersum HOM05D000082 ORTHO05D001639 2.5e-37 159.1 96 80.2
MELO3C009245.2 Cucumis melo HOM05D007348 ORTHO05D009257 2.5e-37 159.1 99 77.8
CsaV3_3G034760 Cucumis sativus L. HOM05D007348 ORTHO05D009257 2.5e-37 159.1 99 78.8
FAN05G4426 Fragaria x ananassa HOM05D007348 ORTHO05D009257 2.5e-37 159.1 106 77.4
Sc01g0004470 Simmondsia chinensis HOM05D007348 ORTHO05D009257 2.5e-37 159.1 140 65.0
Ca_25900_v3 Cicer arietinum L. HOM05D007348 ORTHO05D009257 3.2e-37 158.7 140 62.1
Lalb_Chr01g0022591 Lupinus albus HOM05D007348 ORTHO05D009257 3.2e-37 158.7 95 83.2
arahy.Tifrunner.gnm1.ann1.IF8W7F Arachis hypogaea HOM05D007348 ORTHO05D009257 4.2e-37 158.3 142 63.4
Phvul.008G118700 Phaseolus vulgaris HOM05D007348 ORTHO05D009257 4.2e-37 158.3 145 58.6
Aa31LG1G22570 Aethionema arabicum HOM05D007348 ORTHO05D009257 5.5e-37 157.9 113 74.3
A10p33440 Brassica napus HOM05D007348 ORTHO05D009257 5.5e-37 157.9 115 74.8
C09p74340 Brassica napus HOM05D007348 ORTHO05D009257 5.5e-37 157.9 127 68.5
BolC9t60168H Brassica oleracea HOM05D007348 ORTHO05D009257 5.5e-37 157.9 127 68.5
BraA10t45374Z Brassica rapa HOM05D007348 ORTHO05D009257 5.5e-37 157.9 115 74.8
FvH4_6g13360 Fragaria vesca HOM05D007348 ORTHO05D009257 5.5e-37 157.9 106 76.4
FAN14G5390 Fragaria x ananassa HOM05D007348 ORTHO05D009257 5.5e-37 157.9 106 76.4
Glyma.18G184000 Glycine max HOM05D007348 ORTHO05D009257 5.5e-37 157.9 95 80.0
Solyc10g086570.3 Solanum lycopersicum HOM05D007348 ORTHO05D009257 5.5e-37 157.9 95 82.1
arahy.Tifrunner.gnm1.ann1.HF038C Arachis hypogaea HOM05D007348 ORTHO05D009257 7.2e-37 157.5 143 62.9
FAN02G3968 Fragaria x ananassa HOM05D007348 ORTHO05D009257 7.2e-37 157.5 94 84.0
VMungo1383G1736 Vigna mungo HOM05D007348 ORTHO05D009257 9.4e-37 157.1 141 61.7
FAN09G3409 Fragaria x ananassa HOM05D007348 ORTHO05D009257 1.2e-36 156.8 100 79.0
CDE07G1011 Ceratophyllum demersum HOM05D007348 ORTHO05D009257 2.1e-36 156.0 96 78.1
THA.LOC104816258 Tarenaya hassleriana HOM05D007348 ORTHO05D009257 6.1e-36 154.5 92 81.5
Ah.12g059960 Amaranthus hybridus HOM05D007348 ORTHO05D009257 1.0e-35 153.7 92 81.5
Zm00001eb355890 Zea mays HOM05D007348 ORTHO05D009257 2.3e-35 152.5 87 85.1
AT5G02160 Arabidopsis thaliana HOM05D007348 ORTHO05D009257 4.0e-35 151.8 98 76.5
Os05g0110100 Oryza sativa ssp. japonica HOM05D007348 ORTHO05D009257 5.2e-35 151.4 109 68.8
PSO339G0488 Papaver somniferum HOM05D007348 ORTHO05D009257 5.2e-35 151.4 96 77.1
Duzib093G0801 Durio zibethinus HOM05D007348 ORTHO05D009257 8.8e-35 150.6 108 74.1
Psat3g137840 Pisum sativum HOM05D007348 ORTHO05D009257 8.8e-35 150.6 139 56.8
AUR62042385 Chenopodium quinoa HOM05D007348 ORTHO05D009257 1.2e-34 150.2 90 80.0
Thhalv10014990m.g Eutrema salsugineum HOM05D007348 ORTHO05D009257 2.6e-34 149.1 83 88.0
PSO063G2704 Papaver somniferum HOM05D007348 ORTHO05D009257 5.7e-34 147.9 96 77.1
Sp6g40280 Schrenkiella parvula HOM05D007348 ORTHO05D009257 7.5e-34 147.5 105 71.4
EL10As1g23094 Beta vulgaris HOM05D007348 ORTHO05D009257 1.7e-33 146.4 101 70.3
Medtr7g062470 Medicago truncatula HOM05D007348 ORTHO05D009257 4.9e-33 144.8 84 79.8
Duzib106G1977 Durio zibethinus HOM05D007348 ORTHO05D009257 3.1e-32 142.1 99 75.8
Carub.0006s0100 Capsella rubella HOM05D007348 ORTHO05D009257 4.1e-32 141.7 82 82.9
AL6G11390 Arabidopsis lyrata HOM05D007348 ORTHO05D009257 5.4e-32 141.4 82 82.9
HPP92_026789 Vanilla planifolia HOM05D007348 ORTHO05D009257 5.4e-32 141.4 84 82.1
CARHR211200 Cardamine hirsuta HOM05D007348 ORTHO05D009257 2.0e-31 139.4 128 58.6
Pp3c13_7350 Physcomitrium patens HOM05D007348 ORTHO05D009257 2.0e-31 139.4 93 73.1
Pp3c3_5420 Physcomitrium patens HOM05D007348 ORTHO05D009257 2.7e-31 139.0 84 76.2
Mapoly0046s0114 Marchantia polymorpha HOM05D007348 ORTHO05D009257 2.5e-29 132.5 138 54.3
SMO174G0219 Selaginella moellendorffii HOM05D007348 ORTHO05D009257 2.1e-28 129.4 87 69.0
CANSAT35G1486 Cannabis sativa HOM05D007348 ORTHO05D009257 5.2e-27 124.8 140 54.3
CBR_g52180 Chara braunii HOM05D007348 ORTHO05D009257 9.8e-26 120.6 123 55.3
TPR.G27019 Trifolium pratense HOM05D007348 ORTHO05D009257 1.9e-16 89.7 46 84.8
HPP92_000744 Vanilla planifolia HOM05D007348 ORTHO05D009257 2.4e-16 89.4 84 57.1
TPR.G1710 Trifolium pratense HOM05D007348 ORTHO05D009257 2.2e-09 66.2 50 64.0
AagrBONN_evm.TU.Sc2ySwM_117.386 Anthoceros agrestis HOM05D007348 ORTHO05D009257 5.4e-08 61.6 39 79.5


User provided reference genes

Program Settings