Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 4.7e-62 241.1 130 100.0
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 7.5e-60 233.8 130 97.7
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 8.6e-56 220.3 130 92.3
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 7.2e-55 217.2 130 86.9
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.0e-53 213.4 128 88.3
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 1.0e-53 213.4 130 86.2
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.4e-53 213.0 130 86.9
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.4e-53 213.0 130 86.9
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 2.3e-53 212.2 130 86.9
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 3.0e-53 211.8 130 85.4
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 3.0e-53 211.8 128 85.9
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 1.2e-52 209.9 128 85.2
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.5e-52 209.5 128 84.4
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 2.6e-52 208.8 130 85.4
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 3.4e-52 208.4 128 84.4
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 3.4e-52 208.4 128 85.2
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 4.4e-52 208.0 130 85.4
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 7.5e-52 207.2 128 85.2
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 7.5e-52 207.2 130 84.6
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 1.3e-51 206.5 126 84.9
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 1.3e-51 206.5 126 84.9
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 1.3e-51 206.5 130 83.1
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 1.7e-51 206.1 128 82.8
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 1.7e-51 206.1 130 83.1
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 2.2e-51 205.7 128 83.6
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 2.8e-51 205.3 128 84.4
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 6.3e-51 204.1 130 82.3
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 6.3e-51 204.1 130 81.5
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 8.3e-51 203.8 128 84.4
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 1.1e-50 203.4 130 83.1
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 1.4e-50 203.0 128 82.0
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 1.8e-50 202.6 130 83.1
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 1.8e-50 202.6 127 82.7
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 1.8e-50 202.6 128 82.8
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 2.4e-50 202.2 130 80.8
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 2.4e-50 202.2 128 82.8
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 4.1e-50 201.4 128 83.6
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 4.1e-50 201.4 128 83.6
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 4.1e-50 201.4 130 82.3
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 4.1e-50 201.4 130 81.5
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 5.4e-50 201.1 130 80.8
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 9.2e-50 200.3 122 84.4
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 1.6e-49 199.5 128 80.5
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 1.6e-49 199.5 130 81.5
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 2.0e-49 199.1 130 80.0
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 2.0e-49 199.1 128 81.2
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 2.7e-49 198.7 130 80.0
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 3.5e-49 198.4 130 80.0
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 4.5e-49 198.0 128 80.5
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 4.5e-49 198.0 130 79.2
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 5.9e-49 197.6 130 80.0
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 1.0e-48 196.8 128 79.7
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 1.0e-48 196.8 128 79.7
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 1.7e-48 196.1 128 79.7
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 1.7e-48 196.1 130 78.5
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 1.7e-48 196.1 130 77.7
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 2.9e-48 195.3 134 79.9
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 5.0e-48 194.5 130 80.0
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 5.0e-48 194.5 125 81.6
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 5.0e-48 194.5 126 80.2
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 5.0e-48 194.5 127 78.7
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 6.6e-48 194.1 130 74.6
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 8.6e-48 193.7 128 78.1
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.5e-47 193.0 127 78.7
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.5e-47 193.0 128 78.1
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 1.9e-47 192.6 130 81.5
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 1.9e-47 192.6 128 77.3
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 1.9e-47 192.6 130 76.9
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 4.3e-47 191.4 130 76.2
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 1.2e-46 189.9 130 76.2
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 1.6e-46 189.5 128 75.8
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 1.6e-46 189.5 130 76.2
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 2.1e-46 189.1 130 78.5
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 4.7e-46 188.0 128 77.3
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 4.7e-46 188.0 122 83.6
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 6.1e-46 187.6 128 75.0
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 8.0e-46 187.2 132 76.5
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.4e-45 186.4 127 78.7
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 5.2e-45 184.5 119 80.7
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 1.2e-44 183.3 126 74.6
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 1.2e-44 183.3 120 79.2
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 1.2e-44 183.3 121 79.3
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 4.4e-44 181.4 128 76.6
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 1.3e-43 179.9 128 75.8
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 4.9e-43 177.9 112 83.9
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 1.9e-42 176.0 131 75.6
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 2.0e-41 172.6 171 58.5
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 6.0e-41 171.0 119 76.5
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 1.0e-40 170.2 136 66.9
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 8.6e-40 167.2 124 75.8
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 1.5e-39 166.4 128 70.3
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 1.5e-39 166.4 103 85.4
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 2.5e-39 165.6 128 69.5
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 2.5e-39 165.6 128 69.5
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 5.2e-37 157.9 128 63.3
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 5.2e-37 157.9 116 72.4
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 6.8e-37 157.5 185 54.6
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 8.9e-37 157.1 104 78.8
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 2.6e-36 155.6 103 77.7
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 7.5e-36 154.1 128 60.9
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 6.4e-35 151.0 98 78.6
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.9e-34 149.4 96 79.2
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 7.0e-34 147.5 101 79.2
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 1.9e-31 139.4 92 79.3
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 9.9e-28 127.1 120 54.2
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 6.4e-27 124.4 92 70.7
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 6.0e-25 117.9 99 56.6
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 6.0e-25 117.9 94 67.0
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.3e-24 115.9 72 79.2
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 6.6e-24 114.4 92 67.4
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 4.3e-23 111.7 93 65.6
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 5.6e-23 111.3 107 62.6
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 8.1e-22 107.5 66 84.8
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 2.6e-20 102.4 63 76.2
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 9.9e-20 100.5 62 80.6
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 1.1e-18 97.1 62 77.4
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 4.2e-18 95.1 62 75.8
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 1.6e-17 93.2 62 72.6
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 1.0e-16 90.5 64 73.4
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 2.3e-16 89.4 64 73.4
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 1.5e-15 86.7 57 84.2
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 7.6e-12 74.3 117 33.3
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 4.9e-11 71.6 115 33.9
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 2.1e-09 66.2 61 50.8
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 5.1e-08 61.6 56 67.9
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 1.5e-07 60.1 42 73.8


User provided reference genes

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