Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G077100 Populus trichocarpa HOM05D004681 ORTHO05D005541 7.3e-165 583.9 324 100.0
Sabra06G0058400 Salix brachista HOM05D004681 ORTHO05D005541 1.8e-150 536.2 348 87.4
Potri.018G145508 Populus trichocarpa HOM05D004681 ORTHO05D005541 9.1e-123 444.1 289 76.5
Manes.04G060300 Manihot esculenta HOM05D004681 ORTHO05D005541 5.5e-120 434.9 328 72.9
Manes.14G161401 Manihot esculenta HOM05D004681 ORTHO05D005541 7.2e-120 434.5 328 72.9
Thecc.09G181200 Theobroma cacao HOM05D004681 ORTHO05D005541 2.0e-114 416.4 325 64.6
Cpa.g.sc95.29 Carica papaya HOM05D004681 ORTHO05D005541 1.2e-111 407.1 325 63.7
Atru.chr7.819 Acer truncatum HOM05D004681 ORTHO05D005541 4.0e-110 402.1 318 62.6
Gohir.D08G028500 Gossypium hirsutum HOM05D004681 ORTHO05D005541 1.5e-109 400.2 323 62.8
Cfa013431 Carpinus fangiana HOM05D004681 ORTHO05D005541 5.7e-109 398.3 323 63.8
TWI63G0533 Tripterygium wilfordii HOM05D004681 ORTHO05D005541 7.5e-109 397.9 322 65.5
Gohir.A08G017900 Gossypium hirsutum HOM05D004681 ORTHO05D005541 9.7e-109 397.5 323 62.5
CiPaw.07G195100 Carya illinoinensis HOM05D004681 ORTHO05D005541 2.2e-108 396.4 321 63.6
Duzib168G0714 Durio zibethinus HOM05D004681 ORTHO05D005541 1.1e-107 394.0 319 63.3
Duzib170G0205 Durio zibethinus HOM05D004681 ORTHO05D005541 1.8e-107 393.3 323 62.2
Ciclev10008916m.g Citrus clementina HOM05D004681 ORTHO05D005541 5.3e-107 391.7 326 62.3
Gorai.004G025600 Gossypium raimondii HOM05D004681 ORTHO05D005541 5.3e-107 391.7 334 60.8
CiPaw.08G033800 Carya illinoinensis HOM05D004681 ORTHO05D005541 1.7e-105 386.7 316 64.2
Actinidia06358 Actinidia chinensis HOM05D004681 ORTHO05D005541 2.9e-105 386.0 319 61.4
Actinidia22469 Actinidia chinensis HOM05D004681 ORTHO05D005541 8.5e-105 384.4 318 60.7
Eucgr.C00132 Eucalyptus grandis HOM05D004681 ORTHO05D005541 2.5e-104 382.9 318 60.7
Dinv25404 Davidia involucrata HOM05D004681 ORTHO05D005541 1.2e-103 380.6 324 60.5
GSVIVG01010902001 Vitis vinifera HOM05D004681 ORTHO05D005541 1.6e-103 380.2 323 61.3
QL12p032381 Quercus lobata HOM05D004681 ORTHO05D005541 6.1e-103 378.3 322 61.2
Solyc07g009320.3 Solanum lycopersicum HOM05D004681 ORTHO05D005541 8.0e-103 377.9 327 60.9
Sopen07g005070 Solanum pennellii HOM05D004681 ORTHO05D005541 1.4e-102 377.1 327 60.9
RcHm_v2.0_Chr4g0400191 Rosa chinensis HOM05D004681 ORTHO05D005541 8.8e-102 374.4 318 61.3
CANSAT11G1051 Cannabis sativa HOM05D004681 ORTHO05D005541 2.6e-101 372.9 314 64.3
PGR044G2653 Punica granatum HOM05D004681 ORTHO05D005541 2.6e-101 372.9 326 58.3
PGSC0003DMG400008514 Solanum tuberosum HOM05D004681 ORTHO05D005541 7.5e-101 371.3 327 59.6
CSS0025965 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 1.3e-100 370.5 316 68.7
SalBow7G3904 Salvia bowleyana HOM05D004681 ORTHO05D005541 1.3e-100 370.5 321 59.5
Rhsim13G0200500 Rhododendron simsii HOM05D004681 ORTHO05D005541 4.8e-100 368.6 374 52.7
ClCG06G013520 Citrullus lanatus HOM05D004681 ORTHO05D005541 1.8e-99 366.7 314 60.5
THA.LOC104819968 Tarenaya hassleriana HOM05D004681 ORTHO05D005541 1.2e-98 364.0 320 61.6
MSTRG.10452 Avicennia marina HOM05D004681 ORTHO05D005541 2.7e-98 362.8 323 58.2
BcaB07g31622 Brassica carinata HOM05D004681 ORTHO05D005541 4.5e-98 362.1 319 55.8
FAN17G0253 Fragaria x ananassa HOM05D004681 ORTHO05D005541 5.9e-98 361.7 319 61.1
Dinv26443 Davidia involucrata HOM05D004681 ORTHO05D005541 1.0e-97 360.9 299 62.2
A09p12190 Brassica napus HOM05D004681 ORTHO05D005541 1.3e-97 360.5 319 56.1
Sp3g32480 Schrenkiella parvula HOM05D004681 ORTHO05D005541 1.3e-97 360.5 319 55.8
CAN.G1668.9 Capsicum annuum HOM05D004681 ORTHO05D005541 1.7e-97 360.1 326 58.0
Cc06_g22600 Coffea canephora HOM05D004681 ORTHO05D005541 1.7e-97 360.1 328 61.3
Thhalv10022785m.g Eutrema salsugineum HOM05D004681 ORTHO05D005541 1.7e-97 360.1 319 56.4
AL3G52840 Arabidopsis lyrata HOM05D004681 ORTHO05D005541 2.3e-97 359.8 319 56.4
BcaB03g16704 Brassica carinata HOM05D004681 ORTHO05D005541 2.9e-97 359.4 319 55.8
BraA09t36865Z Brassica rapa HOM05D004681 ORTHO05D005541 3.8e-97 359.0 319 56.1
Carub.0003s3332 Capsella rubella HOM05D004681 ORTHO05D005541 5.0e-97 358.6 319 55.8
BcaC04g22869 Brassica carinata HOM05D004681 ORTHO05D005541 1.1e-96 357.5 319 55.2
FAN22G1928 Fragaria x ananassa HOM05D004681 ORTHO05D005541 1.9e-96 356.7 320 57.5
Prupe.1G079200 Prunus persica HOM05D004681 ORTHO05D005541 2.5e-96 356.3 310 56.8
SalBow7G0268 Salvia bowleyana HOM05D004681 ORTHO05D005541 3.3e-96 355.9 341 56.6
Sc14g0001370 Simmondsia chinensis HOM05D004681 ORTHO05D005541 5.5e-96 355.1 327 56.3
BcaC06g36518 Brassica carinata HOM05D004681 ORTHO05D005541 9.5e-96 354.4 319 58.3
C09p14440 Brassica napus HOM05D004681 ORTHO05D005541 9.5e-96 354.4 319 55.8
RcHm_v2.0_Chr7g0191541 Rosa chinensis HOM05D004681 ORTHO05D005541 9.5e-96 354.4 316 56.3
AT2G19080 Arabidopsis thaliana HOM05D004681 ORTHO05D005541 1.2e-95 354.0 319 57.7
SGA_v2.0_scaffold41G15864 Striga asiatica HOM05D004681 ORTHO05D005541 1.2e-95 354.0 321 57.3
FAN12G2798 Fragaria x ananassa HOM05D004681 ORTHO05D005541 1.6e-95 353.6 320 57.2
Aa31LG8G16140 Aethionema arabicum HOM05D004681 ORTHO05D005541 2.1e-95 353.2 319 56.1
BolC9t54347H Brassica oleracea HOM05D004681 ORTHO05D005541 2.1e-95 353.2 320 54.7
Peaxi162Scf00324g00718 Petunia axillaris HOM05D004681 ORTHO05D005541 2.8e-95 352.8 327 56.6
MD13G1245600 Malus domestica HOM05D004681 ORTHO05D005541 4.7e-95 352.1 314 58.3
MELO3C017439.2 Cucumis melo HOM05D004681 ORTHO05D005541 8.0e-95 351.3 320 59.1
FvH4_4g07590 Fragaria vesca HOM05D004681 ORTHO05D005541 1.4e-94 350.5 320 56.9
Nitab4.5_0010281g0010 Nicotiana tabacum HOM05D004681 ORTHO05D005541 6.8e-94 348.2 319 57.4
AUR62033246 Chenopodium quinoa HOM05D004681 ORTHO05D005541 1.5e-93 347.1 326 53.7
CsaV3_1G031790 Cucumis sativus L. HOM05D004681 ORTHO05D005541 5.7e-93 345.1 319 61.8
EL10Ac8g18317 Beta vulgaris HOM05D004681 ORTHO05D005541 2.8e-92 342.8 332 53.6
CARHR109600 Cardamine hirsuta HOM05D004681 ORTHO05D005541 3.7e-92 342.4 319 53.9
Ah.09g230170 Amaranthus hybridus HOM05D004681 ORTHO05D005541 4.9e-92 342.0 331 53.5
Oeu000976.1 Olea europaea HOM05D004681 ORTHO05D005541 4.9e-92 342.0 321 56.7
C07p03410 Brassica napus HOM05D004681 ORTHO05D005541 8.3e-92 341.3 319 58.9
BolC7t40740H Brassica oleracea HOM05D004681 ORTHO05D005541 8.3e-92 341.3 319 58.9
PSO079G0045 Papaver somniferum HOM05D004681 ORTHO05D005541 3.2e-91 339.3 324 56.5
A07p01650 Brassica napus HOM05D004681 ORTHO05D005541 5.4e-91 338.6 310 60.3
BraA07t27967Z Brassica rapa HOM05D004681 ORTHO05D005541 5.4e-91 338.6 310 60.3
Hund09046 Selenicereus undatus HOM05D004681 ORTHO05D005541 1.2e-90 337.4 331 52.9
CSS0001946 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 1.6e-90 337.0 231 70.1
Aqoxy7G02735 Aquilegia oxysepala HOM05D004681 ORTHO05D005541 2.0e-90 336.7 332 55.4
Migut.L01897 Erythranthe guttata HOM05D004681 ORTHO05D005541 5.9e-90 335.1 321 59.8
HanXRQChr09g0266261 Helianthus annuus HOM05D004681 ORTHO05D005541 5.9e-90 335.1 328 54.0
Lsat_1_v5_gn_4_183080 Lactuca sativa HOM05D004681 ORTHO05D005541 7.8e-90 334.7 319 55.2
PSO423G0181 Papaver somniferum HOM05D004681 ORTHO05D005541 7.8e-90 334.7 327 55.4
Glyma.13G099400 Glycine max HOM05D004681 ORTHO05D005541 2.3e-89 333.2 316 60.4
MBI13_g31546_MAGBIO Magnolia biondii HOM05D004681 ORTHO05D005541 3.9e-89 332.4 331 56.5
COL.COLO4_29315 Corchorus olitorius HOM05D004681 ORTHO05D005541 2.1e-87 326.6 274 63.1
arahy.Tifrunner.gnm1.ann1.K04ERL Arachis hypogaea HOM05D004681 ORTHO05D005541 3.6e-87 325.9 320 59.7
arahy.Tifrunner.gnm1.ann1.L4KBSE Arachis hypogaea HOM05D004681 ORTHO05D005541 6.1e-87 325.1 320 59.7
ECA232G3088 Erigeron canadensis HOM05D004681 ORTHO05D005541 3.1e-86 322.8 323 56.0
arahy.Tifrunner.gnm1.ann1.KM341F Arachis hypogaea HOM05D004681 ORTHO05D005541 6.8e-86 321.6 328 57.9
Glyma.15G164000 Glycine max HOM05D004681 ORTHO05D005541 8.9e-86 321.2 312 53.8
Nitab4.5_0000074g0040 Nicotiana tabacum HOM05D004681 ORTHO05D005541 8.9e-86 321.2 291 58.1
SGA_v2.0_scaffold21G09637 Striga asiatica HOM05D004681 ORTHO05D005541 3.4e-85 319.3 321 53.3
Glyma.17G060700 Glycine max HOM05D004681 ORTHO05D005541 4.4e-85 318.9 316 59.2
Sed0004411 Sechium edule HOM05D004681 ORTHO05D005541 9.8e-85 317.8 234 64.5
VMungo1215G0406 Vigna mungo HOM05D004681 ORTHO05D005541 9.8e-85 317.8 316 53.5
Lalb_Chr15g0084091 Lupinus albus HOM05D004681 ORTHO05D005541 6.4e-84 315.1 331 55.6
arahy.Tifrunner.gnm1.ann1.LX7F61 Arachis hypogaea HOM05D004681 ORTHO05D005541 8.3e-84 314.7 328 58.8
Glyma.09G057900 Glycine max HOM05D004681 ORTHO05D005541 3.2e-83 312.8 322 52.2
Phvul.003G142900 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 4.1e-83 312.4 315 53.3
Lj6g0005497 Lotus japonicus HOM05D004681 ORTHO05D005541 9.2e-83 311.2 312 57.1
unitig_578.g16069 Utricularia gibba HOM05D004681 ORTHO05D005541 1.2e-82 310.8 318 50.6
Potri.018G147625 Populus trichocarpa HOM05D004681 ORTHO05D005541 6.6e-81 305.1 330 55.2
TPR.G5388 Trifolium pratense HOM05D004681 ORTHO05D005541 4.3e-80 302.4 311 55.9
HanXRQChr10g0297571 Helianthus annuus HOM05D004681 ORTHO05D005541 5.6e-80 302.0 369 47.4
Lj7A127G13 Lonicera japonica HOM05D004681 ORTHO05D005541 2.1e-79 300.1 273 57.5
ATR0626G278 Amborella trichopoda HOM05D004681 ORTHO05D005541 4.7e-79 298.9 333 56.5
VMungo1309G2393 Vigna mungo HOM05D004681 ORTHO05D005541 6.2e-79 298.5 319 56.4
Lj4g0016729 Lotus japonicus HOM05D004681 ORTHO05D005541 1.8e-78 297.0 316 56.3
Medtr4g127630 Medicago truncatula HOM05D004681 ORTHO05D005541 5.2e-78 295.4 318 50.9
Ca_21245_v3 Cicer arietinum L. HOM05D004410 ORTHO05D006134 6.8e-78 295.0 317 54.9
Phvul.009G237800 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 8.9e-78 294.7 329 57.1
Lalb_Chr12g0199511 Lupinus albus HOM05D004681 ORTHO05D005541 2.6e-77 293.1 316 57.0
Psat0s736g0040 Pisum sativum HOM05D004681 ORTHO05D005541 5.8e-77 292.0 314 50.3
Ca_02042_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 1.3e-76 290.8 328 57.0
Medtr2g036910 Medicago truncatula HOM05D004681 ORTHO05D005541 1.3e-76 290.8 329 57.4
HPP92_004723 Vanilla planifolia HOM05D004681 ORTHO05D005541 1.2e-74 284.3 323 47.7
Os06g0168000 Oryza sativa ssp. japonica HOM05D004681 ORTHO05D005541 6.0e-74 282.0 328 53.4
TPR.G9028 Trifolium pratense HOM05D004681 ORTHO05D005541 8.1e-71 271.6 329 55.9
Nn2g12745 Nelumbo nucifera HOM05D004681 ORTHO05D005541 1.3e-68 264.2 319 52.7
AUR62021331 Chenopodium quinoa HOM05D004681 ORTHO05D005541 2.2e-68 263.5 327 45.3
DCAR_019823 Daucus carota HOM05D004410 ORTHO05D006134 5.6e-64 248.8 334 45.5
HanXRQChr04g0105751 Helianthus annuus HOM05D004681 ORTHO05D005541 2.8e-63 246.5 188 61.7
vmacro23062 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 2.4e-62 243.4 278 50.4
Psat1g145840 Pisum sativum HOM05D004681 ORTHO05D005541 6.4e-60 235.3 215 55.3
SHI02877 Sapria himalayana HOM05D004681 ORTHO05D005541 8.4e-60 235.0 304 44.4
CDE06G1906 Ceratophyllum demersum HOM05D004681 ORTHO05D005541 7.8e-58 228.4 323 44.9
Haze_21984 Corylus avellana HOM05D004681 ORTHO05D005541 9.6e-56 221.5 209 53.6
TAR636G1425 Trochodendron aralioides HOM05D004681 ORTHO05D005541 1.1e-54 218.0 224 55.8
Pp3c12_12510 Physcomitrium patens HOM05D004681 ORTHO05D005541 2.9e-52 209.9 320 39.1
Pp3c4_10660 Physcomitrium patens HOM05D004681 ORTHO05D005541 4.6e-50 202.6 322 36.3
Potri.001G065336 Populus trichocarpa HOM05D004681 ORTHO05D005541 8.7e-49 198.4 114 86.0
RcHm_v2.0_Chr7g0191431 Rosa chinensis HOM05D004681 ORTHO05D005541 1.5e-48 197.6 295 41.7
Zm00001eb375500 Zea mays HOM05D004681 ORTHO05D005541 2.1e-47 193.7 189 51.9
Mapoly0001s0301 Marchantia polymorpha HOM05D004681 ORTHO05D005541 3.6e-47 193.0 314 40.8
CAN.G609.4 Capsicum annuum HOM05D004681 ORTHO05D005541 5.8e-45 185.7 141 61.7
AagrBONN_evm.TU.Sc2ySwM_228.4196 Anthoceros agrestis HOM05D004681 ORTHO05D005541 3.7e-39 166.4 316 32.9
SGA_v2.0_scaffold41G15854 Striga asiatica HOM05D004681 ORTHO05D005541 1.1e-38 164.9 248 43.5
Potri.018G145080 Populus trichocarpa HOM05D004681 ORTHO05D005541 2.4e-38 163.7 169 70.4
SMO358G0154 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 6.9e-38 162.2 327 38.2
Ca_02046_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 2.1e-34 150.6 225 55.6
Potri.001G064609 Populus trichocarpa HOM05D004681 ORTHO05D005541 2.1e-31 140.6 79 86.1
CAN.G497.61 Capsicum annuum HOM05D004681 ORTHO05D005541 7.1e-27 125.6 115 56.5
CAN.G266.1 Capsicum annuum HOM05D004681 ORTHO05D005541 1.0e-20 105.1 161 39.1
Potri.001G065000 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.9e-19 100.9 117 53.8
SMO367G0296 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 4.6e-18 96.3 247 32.0
vmacro04071 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 5.1e-17 92.8 113 58.4
CBR_g39348 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-16 90.9 184 33.2
Haze_21988 Corylus avellana HOM05D004681 ORTHO05D005541 4.3e-16 89.7 131 45.8
QL05p087685 Quercus lobata HOM05D004681 ORTHO05D005541 3.4e-13 80.1 219 30.1
Haze_21985 Corylus avellana HOM05D004681 ORTHO05D005541 5.0e-12 76.3 112 50.0
SMO230G0066 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 4.2e-11 73.2 234 29.9
PRCOL_00000454 Prasinoderma coloniale HOM05D004681 ORTHO05D005541 2.1e-10 70.9 249 27.3
HanXRQChr04g0105741 Helianthus annuus HOM05D004681 ORTHO05D005541 7.9e-10 68.9 115 40.0
SMO367G1182 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 3.9e-09 66.6 183 27.9
AUR62034598 Chenopodium quinoa HOM05D022644 ORTHO05D003557 1.7e-07 61.2 52 51.9
MELO3C029108.2 Cucumis melo HOM05D004681 ORTHO05D005541 7.0e-06 55.8 48 47.9


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