Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 4.7e-89 331.3 176 100.0
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 6.5e-75 284.3 177 85.9
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 2.3e-72 275.8 176 81.2
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 1.5e-71 273.1 177 80.2
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 2.6e-71 272.3 176 80.7
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 3.4e-71 271.9 177 81.9
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 7.5e-71 270.8 177 79.7
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 7.5e-71 270.8 176 79.5
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 2.2e-70 269.2 179 82.1
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 6.3e-70 267.7 174 81.6
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 6.3e-70 267.7 178 79.2
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 8.3e-70 267.3 177 78.0
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 8.3e-70 267.3 174 81.0
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 1.1e-69 266.9 176 77.3
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 1.1e-69 266.9 176 77.3
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 1.1e-69 266.9 177 79.7
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 1.1e-69 266.9 176 81.8
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 1.8e-69 266.2 176 77.3
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 1.8e-69 266.2 176 77.3
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.8e-69 266.2 176 79.5
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 2.4e-69 265.8 176 79.0
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 3.1e-69 265.4 176 80.7
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 3.1e-69 265.4 177 79.1
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 3.1e-69 265.4 178 79.2
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 3.1e-69 265.4 177 78.0
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 4.1e-69 265.0 176 78.4
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 5.4e-69 264.6 176 77.8
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 5.4e-69 264.6 176 78.4
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 7.0e-69 264.2 176 77.8
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 7.0e-69 264.2 161 83.9
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 9.1e-69 263.8 177 76.3
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 9.1e-69 263.8 176 78.4
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 9.1e-69 263.8 178 78.1
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 9.1e-69 263.8 178 78.7
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.2e-68 263.5 176 78.4
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 1.2e-68 263.5 176 78.4
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.2e-68 263.5 176 78.4
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 1.2e-68 263.5 176 78.4
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 1.6e-68 263.1 174 79.3
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 2.0e-68 262.7 176 79.0
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 2.7e-68 262.3 176 77.3
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 3.5e-68 261.9 176 78.4
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 4.5e-68 261.5 177 75.7
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 4.5e-68 261.5 178 78.1
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 5.9e-68 261.2 176 77.3
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 7.7e-68 260.8 170 78.8
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 7.7e-68 260.8 181 75.1
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 7.7e-68 260.8 181 75.1
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 7.7e-68 260.8 181 75.1
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 1.0e-67 260.4 176 82.4
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 1.3e-67 260.0 178 74.7
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 1.3e-67 260.0 176 81.2
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 2.9e-67 258.8 176 77.3
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.9e-67 258.8 174 81.6
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.9e-67 258.8 173 80.9
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 3.8e-67 258.5 179 76.0
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 3.8e-67 258.5 166 80.1
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 5.0e-67 258.1 177 74.6
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 6.5e-67 257.7 176 77.3
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 6.5e-67 257.7 168 79.8
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 6.5e-67 257.7 154 85.1
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 8.6e-67 257.3 173 80.3
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 1.9e-66 256.1 160 82.5
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 2.5e-66 255.8 176 73.9
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 3.2e-66 255.4 176 76.1
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 3.2e-66 255.4 181 75.7
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 4.2e-66 255.0 176 76.7
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 5.5e-66 254.6 179 74.9
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 7.2e-66 254.2 180 74.4
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 9.5e-66 253.8 174 75.3
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 1.2e-65 253.4 179 74.9
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 1.2e-65 253.4 167 77.8
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 2.1e-65 252.7 165 77.6
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 3.6e-65 251.9 176 75.6
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 3.6e-65 251.9 177 75.1
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 4.7e-65 251.5 176 75.0
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 6.1e-65 251.1 158 81.0
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 6.1e-65 251.1 179 74.3
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 6.1e-65 251.1 179 74.3
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 8.0e-65 250.8 179 74.3
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 3.0e-64 248.8 153 84.3
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 6.8e-64 247.7 176 73.3
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 6.8e-64 247.7 178 74.7
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 1.5e-63 246.5 166 75.3
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 2.0e-63 246.1 167 76.6
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 2.8e-62 242.3 176 75.0
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 3.7e-62 241.9 178 71.3
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 3.7e-62 241.9 152 80.9
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 3.7e-62 241.9 151 80.1
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 4.9e-62 241.5 158 77.8
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 1.4e-61 240.0 162 74.7
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 1.4e-61 240.0 153 81.7
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 1.4e-61 240.0 153 81.7
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 2.4e-61 239.2 145 83.4
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 9.2e-61 237.3 163 75.5
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 1.2e-60 236.9 151 78.8
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 2.0e-60 236.1 155 78.7
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 5.9e-60 234.6 171 73.1
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 1.7e-59 233.0 175 71.4
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 1.7e-59 233.0 175 69.1
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 2.3e-59 232.6 169 71.6
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.5e-58 229.9 155 77.4
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 8.0e-57 224.2 155 78.1
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 1.4e-56 223.4 176 67.6
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 8.9e-56 220.7 120 97.5
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 1.2e-55 220.3 176 66.5
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.7e-54 216.5 137 78.8
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 1.4e-53 213.4 152 72.4
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 3.2e-53 212.2 169 69.8
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 2.0e-52 209.5 145 73.8
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 2.3e-51 206.1 118 89.8
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 1.5e-50 203.4 170 65.3
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 2.5e-50 202.6 129 78.3
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 2.1e-49 199.5 108 96.3
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 5.2e-48 194.9 153 62.7
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 5.2e-48 194.9 154 65.6
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 1.2e-47 193.7 120 81.7
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 1.4e-45 186.8 121 79.3
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 1.9e-45 186.4 106 87.7
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 3.5e-44 182.2 152 60.5
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 1.3e-43 180.3 129 73.6
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 5.0e-43 178.3 131 66.4
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 8.6e-43 177.6 106 84.9
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 1.1e-32 144.1 91 79.1
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 3.2e-29 132.5 123 50.4
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.6e-17 93.6 106 55.7
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 1.8e-11 73.6 120 46.7


User provided reference genes

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