Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G061600 Populus trichocarpa HOM05D005541 ORTHO05D006875 1.4e-170 602.8 296 100.0
Sabra06G0044200 Salix brachista HOM05D005541 ORTHO05D006875 4.4e-156 554.7 296 91.9
Potri.018G118200 Populus trichocarpa HOM05D005541 ORTHO05D006875 2.6e-148 528.9 296 86.8
TWI63G0008 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 7.7e-129 464.2 298 76.8
TWI63G1467 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 1.0e-128 463.8 298 76.8
TWI32G1342 Tripterygium wilfordii HOM05D005541 ORTHO05D006875 2.1e-126 456.1 285 77.2
Manes.14G119600 Manihot esculenta HOM05D005541 ORTHO05D006875 1.0e-125 453.8 297 74.4
Dinv36447 Davidia involucrata HOM05D005541 ORTHO05D006875 4.0e-125 451.8 294 76.2
Thecc.09G137600 Theobroma cacao HOM05D005541 ORTHO05D006875 6.8e-125 451.1 295 74.9
GSVIVG01012859001 Vitis vinifera HOM05D005541 ORTHO05D006875 8.9e-125 450.7 299 74.2
Ciclev10009016m.g Citrus clementina HOM05D005541 ORTHO05D006875 7.5e-124 447.6 284 76.1
Duzib168G0734 Durio zibethinus HOM05D005541 ORTHO05D006875 4.9e-123 444.9 295 73.6
QL02p090804 Quercus lobata HOM05D005541 ORTHO05D006875 6.4e-123 444.5 297 74.1
Gorai.004G109500 Gossypium raimondii HOM05D005541 ORTHO05D006875 8.3e-123 444.1 296 75.0
Cfa002261 Carpinus fangiana HOM05D005541 ORTHO05D006875 7.0e-122 441.0 295 72.9
CiPaw.04G177400 Carya illinoinensis HOM05D005541 ORTHO05D006875 1.6e-121 439.9 294 74.1
Cc06_g07640 Coffea canephora HOM05D005541 ORTHO05D006875 4.6e-121 438.3 299 72.9
Gohir.D13G207800 Gossypium hirsutum HOM05D005541 ORTHO05D006875 7.8e-121 437.6 282 74.8
RcHm_v2.0_Chr2g0087061 Rosa chinensis HOM05D005541 ORTHO05D006875 1.0e-120 437.2 297 73.4
Gohir.A08G090600 Gossypium hirsutum HOM05D005541 ORTHO05D006875 2.3e-120 436.0 296 74.0
Gorai.013G236700 Gossypium raimondii HOM05D005541 ORTHO05D006875 3.9e-120 435.3 291 72.9
PGR142G4414 Punica granatum HOM05D005541 ORTHO05D006875 3.9e-120 435.3 294 71.8
Rhsim03G0253300 Rhododendron simsii HOM05D005541 ORTHO05D006875 5.0e-120 434.9 299 71.9
Gohir.A13G202000 Gossypium hirsutum HOM05D005541 ORTHO05D006875 6.6e-120 434.5 282 74.5
vmacro06115 Vaccinium macrocarpon HOM05D005541 ORTHO05D006875 6.6e-120 434.5 256 80.1
Aqoxy7G03592 Aquilegia oxysepala HOM05D005541 ORTHO05D006875 7.3e-119 431.0 281 73.3
Lsat_1_v5_gn_7_46800 Lactuca sativa HOM05D005541 ORTHO05D006875 7.3e-119 431.0 292 73.6
FvH4_1g02000 Fragaria vesca HOM05D005541 ORTHO05D006875 1.6e-118 429.9 287 72.1
ClCG06G011880 Citrullus lanatus HOM05D005541 ORTHO05D006875 2.8e-118 429.1 295 70.2
Cpa.g.sc46.69 Carica papaya HOM05D005541 ORTHO05D006875 4.7e-118 428.3 297 72.1
Atru.chr7.2014 Acer truncatum HOM05D005541 ORTHO05D006875 2.3e-117 426.0 291 70.4
HanXRQChr03g0063361 Helianthus annuus HOM05D005541 ORTHO05D006875 4.0e-117 425.2 285 73.3
FAN28G0031 Fragaria x ananassa HOM05D005541 ORTHO05D006875 6.8e-117 424.5 294 69.4
Actinidia26358 Actinidia chinensis HOM05D005541 ORTHO05D006875 1.2e-116 423.7 273 75.1
FAN26G0160 Fragaria x ananassa HOM05D005541 ORTHO05D006875 9.8e-116 420.6 297 68.7
Psat1g021320 Pisum sativum HOM05D005541 ORTHO05D006875 9.8e-116 420.6 280 73.6
Medtr2g450740 Medicago truncatula HOM05D005541 ORTHO05D006875 2.2e-115 419.5 305 69.5
TAR100G0002 Trochodendron aralioides HOM05D005541 ORTHO05D006875 4.9e-115 418.3 297 69.4
TAR170G0003 Trochodendron aralioides HOM05D005541 ORTHO05D006875 4.9e-115 418.3 297 69.4
Lj6g0025347 Lotus japonicus HOM05D005541 ORTHO05D006875 6.4e-115 417.9 286 71.0
Peaxi162Scf00088g00520 Petunia axillaris HOM05D005541 ORTHO05D006875 1.4e-114 416.8 298 68.1
Sed0021107 Sechium edule HOM05D005541 ORTHO05D006875 1.4e-114 416.8 295 68.5
MELO3C010277.2 Cucumis melo HOM05D005541 ORTHO05D006875 2.4e-114 416.0 297 70.0
Actinidia14228 Actinidia chinensis HOM05D005541 ORTHO05D006875 3.2e-114 415.6 270 75.2
ECA240G1064 Erigeron canadensis HOM05D005541 ORTHO05D006875 3.2e-114 415.6 285 71.9
Glyma.15G198100 Glycine max HOM05D005541 ORTHO05D006875 3.2e-114 415.6 300 68.7
HanXRQChr09g0241861 Helianthus annuus HOM05D005541 ORTHO05D006875 3.2e-114 415.6 286 70.6
CsaV3_1G028340 Cucumis sativus L. HOM05D005541 ORTHO05D006875 1.2e-113 413.7 297 69.4
arahy.Tifrunner.gnm1.ann1.9T6TW9 Arachis hypogaea HOM05D005541 ORTHO05D006875 2.0e-113 412.9 290 69.3
CANSAT11G2438 Cannabis sativa HOM05D005541 ORTHO05D006875 2.7e-113 412.5 291 68.4
Glyma.09G091600 Glycine max HOM05D005541 ORTHO05D006875 2.7e-113 412.5 294 69.0
MD15G1162200 Malus domestica HOM05D005541 ORTHO05D006875 6.0e-113 411.4 296 69.6
Sed0001591 Sechium edule HOM05D005541 ORTHO05D006875 6.0e-113 411.4 294 70.4
Solyc07g007380.4 Solanum lycopersicum HOM05D005541 ORTHO05D006875 1.0e-112 410.6 303 68.0
Sopen07g003450 Solanum pennellii HOM05D005541 ORTHO05D006875 1.3e-112 410.2 307 67.8
arahy.Tifrunner.gnm1.ann1.H1LUDS Arachis hypogaea HOM05D005541 ORTHO05D006875 1.7e-112 409.8 290 69.3
Lalb_Chr11g0073101 Lupinus albus HOM05D005541 ORTHO05D006875 3.0e-112 409.1 298 68.1
Lalb_Chr08g0233581 Lupinus albus HOM05D005541 ORTHO05D006875 3.3e-111 405.6 298 67.1
SGA_v2.0_scaffold45G17077 Striga asiatica HOM05D005541 ORTHO05D006875 3.3e-111 405.6 283 72.4
PGSC0003DMG400030689 Solanum tuberosum HOM05D005541 ORTHO05D006875 5.6e-111 404.8 299 67.2
Prupe.7G257600 Prunus persica HOM05D005541 ORTHO05D006875 7.3e-111 404.4 302 66.6
Migut.J01236 Erythranthe guttata HOM05D005541 ORTHO05D006875 9.5e-111 404.1 292 68.8
MD02G1018200 Malus domestica HOM05D005541 ORTHO05D006875 1.6e-110 403.3 293 68.3
Nitab4.5_0002286g0050 Nicotiana tabacum HOM05D005541 ORTHO05D006875 1.6e-110 403.3 302 67.9
Nitab4.5_0002845g0020 Nicotiana tabacum HOM05D005541 ORTHO05D006875 2.8e-110 402.5 299 67.6
Ca_03100_v3 Cicer arietinum L. HOM05D005541 ORTHO05D006875 4.7e-110 401.7 305 67.9
Duzib187G1717 Durio zibethinus HOM05D005541 ORTHO05D006875 1.1e-109 400.6 243 78.6
Nn8g39653 Nelumbo nucifera HOM05D005541 ORTHO05D006875 3.1e-109 399.1 293 68.9
CAN.G1281.6 Capsicum annuum HOM05D005541 ORTHO05D006875 6.8e-109 397.9 291 68.4
Phvul.009G212200 Phaseolus vulgaris HOM05D005541 ORTHO05D006875 6.8e-109 397.9 298 66.8
DCAR_009345 Daucus carota HOM05D005541 ORTHO05D006875 1.5e-108 396.7 285 68.8
Sc08g0006020 Simmondsia chinensis HOM05D005541 ORTHO05D006875 5.8e-108 394.8 259 72.2
MSTRG.6077 Avicennia marina HOM05D005541 ORTHO05D006875 2.9e-107 392.5 293 67.9
VMungo1309G2820 Vigna mungo HOM05D005541 ORTHO05D006875 6.4e-107 391.3 301 65.4
Oeu012222.1 Olea europaea HOM05D005541 ORTHO05D006875 1.1e-106 390.6 283 66.8
Gohir.D08G101500 Gossypium hirsutum HOM05D005541 ORTHO05D006875 1.4e-106 390.2 296 69.3
AUR62011221 Chenopodium quinoa HOM05D005541 ORTHO05D006875 9.2e-106 387.5 290 64.5
AUR62020012 Chenopodium quinoa HOM05D005541 ORTHO05D006875 1.7e-104 383.3 262 69.8
Lj7A439T20 Lonicera japonica HOM05D005541 ORTHO05D006875 7.3e-103 377.9 245 75.5
Eucgr.C00480 Eucalyptus grandis HOM05D005541 ORTHO05D006875 1.2e-102 377.1 297 65.7
Dinv41444 Davidia involucrata HOM05D005541 ORTHO05D006875 4.7e-102 375.2 234 78.2
Hund09308 Selenicereus undatus HOM05D005541 ORTHO05D006875 6.2e-102 374.8 297 64.0
THA.LOC104808948 Tarenaya hassleriana HOM05D005541 ORTHO05D006875 4.9e-99 365.2 284 61.6
Haze_25444 Corylus avellana HOM05D005541 ORTHO05D006875 1.1e-98 364.0 344 56.7
Gohir.D13G208000 Gossypium hirsutum HOM05D005541 ORTHO05D006875 2.1e-97 359.8 236 75.4
THA.LOC104815290 Tarenaya hassleriana HOM05D005541 ORTHO05D006875 2.7e-97 359.4 276 62.0
COL.COLO4_33365 Corchorus olitorius HOM05D005541 ORTHO05D006875 1.7e-96 356.7 216 80.1
CSS0024399 Camellia sinensis var. sinensis HOM05D005541 ORTHO05D006875 6.6e-96 354.8 233 73.8
MBI15_g25760_MAGBIO Magnolia biondii HOM05D005541 ORTHO05D006875 1.6e-94 350.1 380 49.2
PSO478G5201 Papaver somniferum HOM05D005541 ORTHO05D006875 3.6e-94 349.0 264 63.6
PSO017G3833 Papaver somniferum HOM05D005541 ORTHO05D006875 6.9e-93 344.7 264 63.6
ATR0767G116 Amborella trichopoda HOM05D005541 ORTHO05D006875 1.3e-91 340.5 283 59.7
AT5G35080 Arabidopsis thaliana HOM05D005541 ORTHO05D006875 1.6e-89 333.6 282 58.9
CDE02G2611 Ceratophyllum demersum HOM05D005541 ORTHO05D006875 1.6e-89 333.6 289 56.1
HPP92_020539 Vanilla planifolia HOM05D005541 ORTHO05D006875 1.0e-88 330.9 276 57.6
EL10Ac8g18781 Beta vulgaris HOM05D005541 ORTHO05D006875 1.9e-87 326.6 233 67.0
BcaB02g10581 Brassica carinata HOM05D005541 ORTHO05D006875 5.6e-87 325.1 280 57.5
Sp4g15930 Schrenkiella parvula HOM05D005541 ORTHO05D006875 1.3e-86 323.9 281 57.7
Ah.09g224130 Amaranthus hybridus HOM05D005541 ORTHO05D006875 1.4e-85 320.5 226 67.7
Aa31LG10G11810 Aethionema arabicum HOM05D005541 ORTHO05D006875 5.3e-85 318.5 239 64.9
Carub.0007s3085 Capsella rubella HOM05D005541 ORTHO05D006875 1.5e-84 317.0 279 57.0
Thhalv10002066m.g Eutrema salsugineum HOM05D005541 ORTHO05D006875 2.6e-84 316.2 269 57.6
BcaC02g11442 Brassica carinata HOM05D005541 ORTHO05D006875 4.5e-84 315.5 261 59.0
C04p15500 Brassica napus HOM05D005541 ORTHO05D006875 4.5e-84 315.5 261 59.0
BolC4t23121H Brassica oleracea HOM05D005541 ORTHO05D006875 4.5e-84 315.5 261 59.0
BolC3t14579H Brassica oleracea HOM05D005541 ORTHO05D006875 5.8e-84 315.1 254 61.0
BraA05t20138Z Brassica rapa HOM05D005541 ORTHO05D006875 5.8e-84 315.1 259 59.1
BcaB01g03929 Brassica carinata HOM05D005541 ORTHO05D006875 7.6e-84 314.7 270 57.4
A05p11950 Brassica napus HOM05D005541 ORTHO05D006875 9.9e-84 314.3 259 59.1
C03p21960 Brassica napus HOM05D005541 ORTHO05D006875 1.7e-83 313.5 254 61.0
Actinidia38706 Actinidia chinensis HOM05D005541 ORTHO05D006875 9.3e-82 307.8 219 67.1
FAN19G0623 Fragaria x ananassa HOM05D005541 ORTHO05D006875 1.2e-81 307.4 206 72.3
Zm00001eb028460 Zea mays HOM05D005541 ORTHO05D006875 1.5e-76 290.4 284 51.1
Oeu028018.1 Olea europaea HOM05D005541 ORTHO05D006875 4.2e-74 282.3 251 57.8
CARHR217140 Cardamine hirsuta HOM05D005541 ORTHO05D006875 2.5e-71 273.1 231 58.4
Pp3c2_6810 Physcomitrium patens HOM05D005541 ORTHO05D006875 1.3e-70 270.8 262 51.9
BcaC01g05834 Brassica carinata HOM05D005541 ORTHO05D006875 1.7e-67 260.4 204 61.8
Pp3c1_27810 Physcomitrium patens HOM05D005541 ORTHO05D006875 6.0e-65 251.9 234 54.7
Mapoly0020s0022 Marchantia polymorpha HOM05D005541 ORTHO05D006875 1.3e-62 244.2 262 52.7
Zm00001eb136970 Zea mays HOM05D005541 ORTHO05D006875 5.3e-61 238.8 226 52.2
SMO174G0227 Selaginella moellendorffii HOM05D005541 ORTHO05D006875 6.7e-56 221.9 265 45.7
unitig_0.g507 Utricularia gibba HOM05D005541 ORTHO05D006875 9.7e-55 218.0 151 68.9
AagrBONN_evm.TU.Sc2ySwM_228.2742 Anthoceros agrestis HOM05D005541 ORTHO05D006875 2.0e-52 210.3 279 41.2
Oeu028135.2 Olea europaea HOM05D005541 ORTHO05D006875 2.5e-50 203.4 189 58.7
SEGI_36543 Sequoiadendron giganteum HOM05D005541 ORTHO05D006875 3.4e-44 183.0 150 63.3
CBR_g45403 Chara braunii HOM05D005541 ORTHO05D006875 2.6e-36 156.8 288 35.1
Ca_27153_v3 Cicer arietinum L. HOM05D005541 ORTHO05D006875 3.6e-33 146.4 88 81.8
Os06g0644800 Oryza sativa ssp. japonica HOM05D005541 ORTHO05D006875 1.7e-30 137.5 127 52.8
MCO11G854 Micromonas commoda HOM05D005541 ORTHO05D006875 8.8e-24 115.2 216 33.8
RcHm_v2.0_Chr1g0314561 Rosa chinensis HOM05D005541 ORTHO05D006875 2.4e-21 107.1 77 66.2
Cre06.g257900 Chlamydomonas reinhardtii HOM05D005541 ORTHO05D006875 5.9e-20 102.4 178 37.6
PRCOL_00001292 Prasinoderma coloniale HOM05D005541 ORTHO05D006875 1.3e-19 101.3 160 36.2
Ca_24194_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.8e-16 90.9 120 45.8
RcHm_v2.0_Chr5g0069501 Rosa chinensis HOM05D005541 ORTHO05D006875 6.8e-16 89.0 60 66.7
HanXRQChr03g0068961 Helianthus annuus HOM05D005541 ORTHO05D006875 2.0e-15 87.4 48 83.3
unitig_0.g506 Utricularia gibba HOM05D001054 ORTHO05D007110 2.6e-15 87.0 88 53.4
RcHm_v2.0_Chr7g0241391 Rosa chinensis HOM05D005541 ORTHO05D006875 7.8e-12 75.5 43 74.4
CARHR217150 Cardamine hirsuta HOM05D005541 ORTHO05D006875 5.7e-07 59.3 50 54.0
Cfa024351 Carpinus fangiana HOM05D005541 ORTHO05D124727 5.7e-07 59.3 268 25.0


User provided reference genes

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