Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G060000 Populus trichocarpa HOM05D007673 ORTHO05D009278 4.5e-75 284.6 157 100.0
Sabra06G0043300 Salix brachista HOM05D007673 ORTHO05D009278 1.2e-59 233.4 160 84.4
Potri.018G115601 Populus trichocarpa HOM05D007673 ORTHO05D009278 3.4e-43 178.7 157 69.4
Manes.06G043400 Manihot esculenta HOM05D007673 ORTHO05D009278 6.5e-34 147.9 160 59.4
Dinv41432 Davidia involucrata HOM05D007673 ORTHO05D009278 8.5e-34 147.5 159 57.2
Manes.14G120200 Manihot esculenta HOM05D007673 ORTHO05D009278 1.7e-29 133.3 154 56.5
TAR383G0338 Trochodendron aralioides HOM05D007673 ORTHO05D009278 2.9e-26 122.5 158 47.5
Thecc.09G139900 Theobroma cacao HOM05D007673 ORTHO05D009278 8.0e-24 114.4 153 47.1
CiPaw.16G118400 Carya illinoinensis HOM05D007673 ORTHO05D009278 1.8e-23 113.2 168 50.6
TAR625G1436 Trochodendron aralioides HOM05D007673 ORTHO05D009278 4.0e-23 112.1 158 47.5
COL.COLO4_24126 Corchorus olitorius HOM05D007673 ORTHO05D009278 5.2e-23 111.7 159 47.2
QL02p091069 Quercus lobata HOM05D007673 ORTHO05D009278 6.8e-23 111.3 160 53.8
Rhsim01G0051900 Rhododendron simsii HOM05D007673 ORTHO05D009278 1.3e-21 107.1 186 40.3
Actinidia04238 Actinidia chinensis HOM05D007673 ORTHO05D009278 2.2e-21 106.3 160 45.6
CSS0039366 Camellia sinensis var. sinensis HOM05D007673 ORTHO05D009278 2.8e-21 105.9 160 43.8
GSVIVG01012874001 Vitis vinifera HOM05D007673 ORTHO05D009278 2.8e-21 105.9 151 47.0
TWI32G1294 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 6.3e-21 104.8 160 43.8
Lalb_Chr07g0179441 Lupinus albus HOM05D007673 ORTHO05D009278 8.3e-21 104.4 159 45.3
CiPaw.15G183400 Carya illinoinensis HOM05D007673 ORTHO05D009278 1.1e-20 104.0 165 47.9
Nn2g12220 Nelumbo nucifera HOM05D007673 ORTHO05D009278 1.4e-20 103.6 159 47.8
TWI34G1167 Tripterygium wilfordii HOM05D007673 ORTHO05D009278 1.8e-20 103.2 160 45.0
Lalb_Chr13g0301271 Lupinus albus HOM05D007673 ORTHO05D009278 7.7e-19 97.8 164 45.1
Gohir.D05G013100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 2.9e-18 95.9 152 46.1
Gorai.009G013100 Gossypium raimondii HOM05D007673 ORTHO05D009278 2.9e-18 95.9 152 46.1
Dinv43178 Davidia involucrata HOM05D007673 ORTHO05D009278 6.5e-18 94.7 158 44.3
Actinidia21918 Actinidia chinensis HOM05D007673 ORTHO05D009278 1.5e-17 93.6 163 43.6
Peaxi162Scf00088g00016 Petunia axillaris HOM05D007673 ORTHO05D009278 3.3e-17 92.4 160 42.5
Gohir.A05G012100 Gossypium hirsutum HOM05D007673 ORTHO05D009278 7.2e-17 91.3 152 44.1
MBI14_g03622_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 3.6e-16 89.0 160 43.1
Glyma.17G106100 Glycine max HOM05D007673 ORTHO05D009278 1.4e-15 87.0 161 42.2
MD15G1160900 Malus domestica HOM05D007673 ORTHO05D009278 1.4e-15 87.0 155 43.9
Prupe.7G256100 Prunus persica HOM05D007673 ORTHO05D009278 1.8e-15 86.7 173 45.1
Glyma.13G165000 Glycine max HOM05D007673 ORTHO05D009278 8.9e-15 84.3 161 42.2
Medtr4g116360 Medicago truncatula HOM05D007673 ORTHO05D009278 2.0e-14 83.2 157 42.7
Cc06_g07510 Coffea canephora HOM05D007673 ORTHO05D009278 9.8e-14 80.9 167 37.7
Nitab4.5_0003305g0020 Nicotiana tabacum HOM05D007673 ORTHO05D009278 9.8e-14 80.9 145 42.1
Potri.006G059900 Populus trichocarpa HOM05D012006 ORTHO05D014172 9.8e-14 80.9 74 63.5
Lj6g0015094 Lotus japonicus HOM05D007673 ORTHO05D009278 1.7e-13 80.1 159 39.0
Aqoxy7G03558 Aquilegia oxysepala HOM05D007673 ORTHO05D009278 2.2e-13 79.7 169 39.6
Nn8g39681 Nelumbo nucifera HOM05D007673 ORTHO05D009278 2.2e-13 79.7 156 39.7
MD02G1016300 Malus domestica HOM05D007673 ORTHO05D009278 3.7e-13 79.0 164 45.1
Phvul.003G173600 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 3.7e-13 79.0 161 41.0
CAN.G877.9 Capsicum annuum HOM05D007673 ORTHO05D009278 4.9e-13 78.6 164 39.6
Nitab4.5_0008829g0020 Nicotiana tabacum HOM05D007673 ORTHO05D009278 4.9e-13 78.6 143 44.1
PGSC0003DMG400030693 Solanum tuberosum HOM05D007673 ORTHO05D009278 4.9e-13 78.6 164 39.6
Medtr2g450420 Medicago truncatula HOM05D007673 ORTHO05D009278 8.3e-13 77.8 164 37.8
Solyc07g007270.3 Solanum lycopersicum HOM05D007673 ORTHO05D009278 8.3e-13 77.8 164 39.0
VMungo1215G2163 Vigna mungo HOM05D007673 ORTHO05D009278 2.4e-12 76.3 154 38.3
Psat0s503g0080 Pisum sativum HOM05D007673 ORTHO05D009278 4.1e-12 75.5 159 38.4
Psat0s5432g0040 Pisum sativum HOM05D007673 ORTHO05D009278 4.1e-12 75.5 159 38.4
FvH4_1g01840 Fragaria vesca HOM05D022859 ORTHO05D009278 9.2e-12 74.3 160 40.0
Sopen07g003330 Solanum pennellii HOM05D007673 ORTHO05D009278 9.2e-12 74.3 164 37.8
FAN28G1648 Fragaria x ananassa HOM05D022859 ORTHO05D009278 1.2e-11 73.9 162 41.4
Peaxi162Scf00108g00316 Petunia axillaris HOM05D007673 ORTHO05D009278 1.2e-11 73.9 160 40.0
vmacro21889 Vaccinium macrocarpon HOM05D007673 ORTHO05D009278 2.0e-11 73.2 193 32.1
Migut.J01263 Erythranthe guttata HOM05D007673 ORTHO05D009278 1.3e-10 70.5 157 39.5
TPR.G15789 Trifolium pratense HOM05D007673 ORTHO05D009278 2.3e-10 69.7 157 40.1
arahy.Tifrunner.gnm1.ann1.5L22XG Arachis hypogaea HOM05D007673 ORTHO05D009278 1.5e-09 67.0 164 36.0
Sabra06G0043200 Salix brachista HOM05D012006 ORTHO05D014172 5.6e-09 65.1 75 56.0
Oeu051709.1 Olea europaea HOM05D007673 ORTHO05D009278 7.3e-09 64.7 152 38.2
MSTRG.6086 Avicennia marina HOM05D007673 ORTHO05D009278 1.6e-08 63.5 160 36.9
Phvul.009G210216 Phaseolus vulgaris HOM05D007673 ORTHO05D009278 4.7e-08 62.0 160 35.6
Sc14g0000100 Simmondsia chinensis HOM05D052917 ORTHO05D009278 4.7e-08 62.0 159 37.7
FAN26G0562 Fragaria x ananassa HOM05D022859 ORTHO05D009278 6.1e-08 61.6 209 34.4
Eucgr.C04106 Eucalyptus grandis HOM05D007673 ORTHO05D009278 8.0e-08 61.2 96 42.7
HanXRQChr09g0243101 Helianthus annuus HOM05D007673 ORTHO05D009278 1.4e-07 60.5 159 35.2
MBI15_g28791_MAGBIO Magnolia biondii HOM05D007673 ORTHO05D009278 4.0e-07 58.9 124 32.3
Sc08g0005870 Simmondsia chinensis HOM05D052917 ORTHO05D009278 5.2e-07 58.5 164 31.7
Psat4g035400 Pisum sativum HOM05D007673 ORTHO05D009278 6.8e-07 58.2 156 34.0
VMungo1309G0908 Vigna mungo HOM05D007673 ORTHO05D009278 6.8e-07 58.2 157 32.5
CsaV3_1G028420 Cucumis sativus L. HOM05D007673 ORTHO05D009278 2.0e-06 56.6 149 35.6
Dinv42922 Davidia involucrata HOM05D012006 ORTHO05D014172 2.6e-06 56.2 76 48.7
EL10Ac8g18805 Beta vulgaris HOM05D022392 ORTHO05D009278 3.4e-06 55.8 168 36.9
arahy.Tifrunner.gnm1.ann1.L2N39S Arachis hypogaea HOM05D007673 ORTHO05D009278 4.4e-06 55.5 163 33.1
Oeu055924.1 Olea europaea HOM05D007673 ORTHO05D009278 4.4e-06 55.5 154 33.1
Atru.chr7.275 Acer truncatum HOM05D007673 ORTHO05D009278 5.8e-06 55.1 163 37.4
HPP92_017273 Vanilla planifolia HOM05D007673 ORTHO05D009278 5.8e-06 55.1 154 32.5
FAN19G1896 Fragaria x ananassa HOM05D022859 ORTHO05D009278 7.5e-06 54.7 176 31.8
Cpa.g.sc46.77 Carica papaya HOM05D007673 ORTHO05D009278 9.8e-06 54.3 91 41.8


User provided reference genes

Program Settings