Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 0.0e+00 1095.9 571 100.0
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 6.6e-286 986.9 576 90.1
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 6.9e-251 870.5 571 79.2
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 2.8e-244 848.6 571 77.6
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 1.4e-238 829.7 571 74.8
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 3.7e-236 821.6 571 75.8
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 3.1e-235 818.5 571 75.5
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.2e-234 816.6 570 76.0
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 2.6e-234 815.5 558 75.1
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 2.6e-234 815.5 570 76.0
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 2.6e-234 815.5 570 74.2
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 3.8e-233 811.6 571 75.7
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 1.6e-231 806.2 571 74.4
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 8.0e-231 803.9 571 74.3
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 2.3e-230 802.4 571 74.6
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 3.9e-230 801.6 571 75.0
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 3.3e-229 798.5 566 74.0
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 1.7e-228 796.2 553 74.1
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 6.3e-228 794.3 571 74.4
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 6.3e-228 794.3 571 74.3
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 1.1e-227 793.5 571 72.3
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 1.8e-227 792.7 572 71.5
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.4e-227 792.3 586 72.7
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 7.0e-227 790.8 571 74.4
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 7.0e-227 790.8 568 73.2
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 4.5e-226 788.1 573 73.1
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 5.0e-225 784.6 571 71.5
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 4.7e-223 778.1 570 71.9
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 2.3e-222 775.8 575 72.5
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 1.2e-221 773.5 571 73.0
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 4.4e-221 771.5 573 70.9
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 4.4e-221 771.5 571 72.9
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 8.3e-220 767.3 571 70.9
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 2.7e-218 762.3 571 70.8
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 5.9e-218 761.1 571 69.9
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 1.0e-217 760.4 571 70.2
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 1.3e-217 760.0 571 69.4
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 6.5e-217 757.7 572 70.1
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 1.0e-214 750.4 590 66.6
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 1.0e-214 750.4 571 69.4
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 6.8e-214 747.7 567 69.0
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 1.5e-213 746.5 571 68.8
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 1.3e-212 743.4 571 69.2
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 8.3e-212 740.7 572 69.2
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 8.3e-212 740.7 571 67.6
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 4.1e-211 738.4 571 68.8
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.6e-210 736.5 571 68.3
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 2.0e-210 736.1 571 68.0
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 5.9e-210 734.6 569 67.3
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 5.9e-210 734.6 571 68.0
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 7.7e-210 734.2 571 68.3
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 1.0e-209 733.8 647 63.5
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 2.9e-209 732.3 571 67.4
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 1.9e-208 729.6 571 67.8
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 2.5e-208 729.2 571 67.8
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 5.5e-208 728.0 571 67.8
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 7.2e-208 727.6 571 68.0
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 3.0e-206 722.2 582 68.4
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 8.9e-206 720.7 571 67.8
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 2.2e-204 716.1 571 67.6
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 4.9e-204 714.9 572 66.6
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 4.9e-204 714.9 567 67.4
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 2.7e-202 709.1 567 67.0
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 1.7e-201 706.4 568 64.1
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 1.7e-201 706.4 588 63.1
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 5.2e-198 694.9 567 64.9
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 1.5e-197 693.3 568 67.1
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 2.0e-197 693.0 568 66.4
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 9.8e-197 690.6 572 64.3
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 1.3e-196 690.3 570 63.3
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 1.3e-196 690.3 566 65.7
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 2.2e-196 689.5 567 63.7
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 2.9e-196 689.1 568 63.2
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 4.1e-195 685.3 567 64.4
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 9.2e-195 684.1 566 63.8
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 6.0e-194 681.4 569 64.0
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 5.0e-193 678.3 572 64.7
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 8.6e-193 677.6 571 63.7
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 8.6e-193 677.6 571 63.7
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 8.6e-193 677.6 571 63.7
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 1.5e-192 676.8 571 63.9
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 1.5e-192 676.8 571 63.9
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 1.5e-189 666.8 529 67.3
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 4.1e-187 658.7 573 63.4
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 8.9e-182 641.0 570 60.4
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 2.2e-180 636.3 509 66.0
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 3.2e-179 632.5 567 61.2
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 1.0e-177 627.5 573 57.8
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 3.0e-177 625.9 528 62.7
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 2.1e-175 619.8 572 59.3
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 1.5e-173 613.6 567 57.1
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 2.2e-172 609.8 572 57.3
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 7.8e-170 601.3 485 66.0
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 2.1e-167 593.2 637 52.9
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 4.4e-165 585.5 527 60.0
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 4.3e-160 568.9 413 70.5
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 4.2e-123 446.0 452 56.6
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 2.3e-121 440.3 415 62.9
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 1.7e-119 434.1 588 41.8
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 8.5e-116 421.8 572 43.5
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 4.4e-104 382.9 594 39.1
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 1.3e-100 371.3 224 80.8
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 3.8e-100 369.8 301 68.4
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 1.6e-98 364.4 237 76.4
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 3.4e-96 356.7 594 37.4
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 1.3e-92 344.7 564 36.9
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 4.7e-90 336.3 296 62.8
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 1.3e-87 328.2 260 70.0
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 5.8e-72 276.2 271 55.4
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 4.1e-70 270.0 246 57.3
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 7.6e-64 249.2 378 46.8
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 5.1e-52 209.9 151 72.2
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 5.1e-52 209.9 606 26.7
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 2.4e-49 201.1 211 54.0
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 1.1e-38 165.6 157 63.7
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 3.3e-35 154.1 151 55.6
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 4.3e-27 127.1 71 80.3
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 1.4e-12 79.0 56 75.0
THA.LOC104799305 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 1.8e-09 68.6 64 53.1
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 6.9e-09 66.6 51 60.8


User provided reference genes

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