Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G056000 Populus trichocarpa HOM05D008758 ORTHO05D009412 9.9e-27 122.9 69 100.0
Sabra06G0039600 Salix brachista HOM05D008758 ORTHO05D009412 5.2e-20 100.5 68 80.9
Potri.016G052200 Populus trichocarpa HOM05D008758 ORTHO05D009412 1.4e-17 92.4 68 82.4
Potri.016G052400 Populus trichocarpa HOM05D008758 ORTHO05D009412 6.0e-16 87.0 69 76.8
Potri.006G055800 Populus trichocarpa HOM05D008758 ORTHO05D009412 1.5e-11 72.4 68 67.6
Potri.006G055900 Populus trichocarpa HOM05D008758 ORTHO05D009412 1.5e-11 72.4 68 67.6
TAR376G0475 Trochodendron aralioides HOM05D008758 ORTHO05D009412 3.8e-10 67.8 70 61.4
TAR376G0271 Trochodendron aralioides HOM05D003939 ORTHO05D009412 8.4e-10 66.6 70 58.6
TAR376G0113 Trochodendron aralioides HOM05D008758 ORTHO05D009412 5.4e-09 63.9 71 57.7
TAR376G0356 Trochodendron aralioides HOM05D003939 ORTHO05D009412 3.5e-08 61.2 71 54.9
TAR376G0381 Trochodendron aralioides HOM05D008758 ORTHO05D009412 3.5e-08 61.2 71 56.3
PGSC0003DMG400008180 Solanum tuberosum HOM05D008319 ORTHO05D009412 4.6e-08 60.8 67 62.7
TAR376G0225 Trochodendron aralioides HOM05D008758 ORTHO05D009412 7.9e-08 60.1 71 54.9
Cpa.g.sc85.131 Carica papaya HOM05D008319 ORTHO05D009412 1.0e-07 59.7 69 56.5
TAR291G0003 Trochodendron aralioides HOM05D008758 ORTHO05D009412 1.0e-07 59.7 70 58.6
TAR375G0878 Trochodendron aralioides HOM05D008758 ORTHO05D009412 1.0e-07 59.7 70 58.6
TAR633G0918 Trochodendron aralioides HOM05D008758 ORTHO05D009412 1.0e-07 59.7 70 55.7
Atru.chr1.1012 Acer truncatum HOM05D008758 ORTHO05D009412 1.3e-07 59.3 70 57.1
Thecc.05G164100 Theobroma cacao HOM05D014458 ORTHO05D016968 1.8e-07 58.9 67 58.2
TAR291G0001 Trochodendron aralioides HOM05D008758 ORTHO05D009412 1.8e-07 58.9 70 57.1
TAR375G0339 Trochodendron aralioides HOM05D008758 ORTHO05D009412 1.8e-07 58.9 70 57.1
Gohir.D01G122000 Gossypium hirsutum HOM05D014458 ORTHO05D016968 2.3e-07 58.5 67 61.2
Atru.chr1.1009 Acer truncatum HOM05D008758 ORTHO05D009412 3.0e-07 58.2 70 55.7
Atru.chr1.977 Acer truncatum HOM05D008758 ORTHO05D009412 3.0e-07 58.2 70 55.7
Atru.chr1.1008 Acer truncatum HOM05D008758 ORTHO05D009412 3.9e-07 57.8 58 60.3
Atru.chr1.1014 Acer truncatum HOM05D008758 ORTHO05D009412 3.9e-07 57.8 53 66.0
Peaxi162Scf00164g01135 Petunia axillaris HOM05D008319 ORTHO05D009412 3.9e-07 57.8 67 58.2
PGSC0003DMG400027225 Solanum tuberosum HOM05D008319 ORTHO05D009412 3.9e-07 57.8 67 59.7
Nitab4.5_0003074g0030 Nicotiana tabacum HOM05D008319 ORTHO05D009412 5.1e-07 57.4 67 53.7
ClCG04G000650 Citrullus lanatus HOM05D008758 ORTHO05D009412 6.7e-07 57.0 70 51.4
Atru.chr1.976 Acer truncatum HOM05D008758 ORTHO05D009412 8.7e-07 56.6 74 59.5
EL10Ac3g07002 Beta vulgaris HOM05D024890 ORTHO05D026518 1.5e-06 55.8 67 47.8
Nn2g15429 Nelumbo nucifera HOM05D008758 ORTHO05D009412 1.5e-06 55.8 71 50.7
TWI09G0015 Tripterygium wilfordii HOM05D012217 ORTHO05D013836 1.5e-06 55.8 62 56.5
CAN.G1392.9 Capsicum annuum HOM05D008319 ORTHO05D009412 1.9e-06 55.5 64 57.8
COL.COLO4_28691 Corchorus olitorius HOM05D010551 ORTHO05D012668 2.5e-06 55.1 72 52.8
Nitab4.5_0002861g0010 Nicotiana tabacum HOM05D008319 ORTHO05D009412 2.5e-06 55.1 63 57.1
Potri.016G052301 Populus trichocarpa HOM05D008758 ORTHO05D331397 4.3e-06 54.3 70 54.3
Solyc05g053060.1 Solanum lycopersicum HOM05D008319 ORTHO05D009412 4.3e-06 54.3 67 58.2
Sopen05g031580 Solanum pennellii HOM05D008319 ORTHO05D009412 4.3e-06 54.3 67 58.2
TAR623G0972 Trochodendron aralioides HOM05D020325 ORTHO05D010948 4.3e-06 54.3 67 47.8
Atru.chr1.1010 Acer truncatum HOM05D008758 ORTHO05D009412 5.6e-06 53.9 70 54.3
Atru.chr1.978 Acer truncatum HOM05D008758 ORTHO05D009412 5.6e-06 53.9 70 54.3
Atru.chr1.980 Acer truncatum HOM05D008758 ORTHO05D009412 5.6e-06 53.9 70 54.3
QL07p021867 Quercus lobata HOM05D008758 ORTHO05D009412 7.4e-06 53.5 69 53.6
Sabra16G0055600 Salix brachista HOM05D008758 ORTHO05D009412 7.4e-06 53.5 31 87.1
Atru.chr1.1011 Acer truncatum HOM05D008758 ORTHO05D009412 9.6e-06 53.1 70 52.9
Gohir.A01G134900 Gossypium hirsutum HOM05D014458 ORTHO05D016968 9.6e-06 53.1 61 57.4


User provided reference genes

Program Settings