Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G051600 Populus trichocarpa HOM05D007273 ORTHO05D009230 1.6e-127 459.5 248 100.0
Sabra06G0036200 Salix brachista HOM05D007273 ORTHO05D009230 9.4e-120 433.7 245 91.0
Manes.09G022200 Manihot esculenta HOM05D007273 ORTHO05D009230 7.0e-83 311.2 234 68.8
Gohir.D09G118000 Gossypium hirsutum HOM05D007273 ORTHO05D009230 1.4e-75 287.0 243 61.7
Gorai.006G136300 Gossypium raimondii HOM05D007273 ORTHO05D009230 1.4e-75 287.0 243 61.7
Thecc.05G153100 Theobroma cacao HOM05D007273 ORTHO05D009230 1.9e-75 286.6 251 61.8
Gohir.A09G121900 Gossypium hirsutum HOM05D007273 ORTHO05D009230 1.6e-74 283.5 243 60.9
TWI74G1215 Tripterygium wilfordii HOM05D007273 ORTHO05D009230 2.7e-74 282.7 240 61.7
Cfa016813 Carpinus fangiana HOM05D007273 ORTHO05D009230 6.0e-74 281.6 255 59.6
CiPaw.09G038500 Carya illinoinensis HOM05D007273 ORTHO05D009230 8.6e-73 277.7 233 62.2
COL.COLO4_28286 Corchorus olitorius HOM05D007273 ORTHO05D009230 1.1e-72 277.3 227 63.0
Haze_19853 Corylus avellana HOM05D007273 ORTHO05D009230 7.3e-72 274.6 250 59.2
CANSAT80G2704 Cannabis sativa HOM05D007273 ORTHO05D009230 1.3e-68 263.8 227 62.1
CANSAT80G0412 Cannabis sativa HOM05D007273 ORTHO05D009230 2.9e-68 262.7 227 61.7
Ciclev10033324m.g Citrus clementina HOM05D007273 ORTHO05D009230 2.9e-68 262.7 235 60.9
BcaNung02834 Brassica carinata HOM05D007273 ORTHO05D009230 9.2e-67 257.7 232 60.3
Carub.0004s2403 Capsella rubella HOM05D007273 ORTHO05D009230 6.0e-66 255.0 252 57.1
THA.LOC104802102 Tarenaya hassleriana HOM05D007273 ORTHO05D009230 1.3e-65 253.8 231 60.6
Cpa.g.sc92.54 Carica papaya HOM05D007273 ORTHO05D009230 1.7e-65 253.4 227 63.0
Medtr7g091490 Medicago truncatula HOM05D007273 ORTHO05D009230 1.7e-65 253.4 259 56.4
C04p02970 Brassica napus HOM05D007273 ORTHO05D009230 2.3e-65 253.1 235 60.0
Psat3g072760 Pisum sativum HOM05D007273 ORTHO05D009230 2.3e-65 253.1 243 57.2
RcHm_v2.0_Chr3g0482541 Rosa chinensis HOM05D007273 ORTHO05D009230 2.3e-65 253.1 238 56.7
Thhalv10017127m.g Eutrema salsugineum HOM05D007273 ORTHO05D009230 3.0e-65 252.7 235 60.0
Prupe.7G059600 Prunus persica HOM05D007273 ORTHO05D009230 5.1e-65 251.9 244 58.2
A05p02510 Brassica napus HOM05D007273 ORTHO05D009230 8.6e-65 251.1 232 59.9
BraA05t19244Z Brassica rapa HOM05D007273 ORTHO05D009230 8.6e-65 251.1 232 59.9
FvH4_6g23860 Fragaria vesca HOM05D007273 ORTHO05D009230 8.6e-65 251.1 244 56.1
FAN05G2271 Fragaria x ananassa HOM05D007273 ORTHO05D009230 1.1e-64 250.8 246 56.1
QL07p000584 Quercus lobata HOM05D007273 ORTHO05D009230 1.1e-64 250.8 252 57.1
Lj1g0021019 Lotus japonicus HOM05D007273 ORTHO05D009230 1.9e-64 250.0 257 55.6
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 3.3e-64 249.2 235 59.1
Lalb_Chr01g0017311 Lupinus albus HOM05D007273 ORTHO05D009230 4.3e-64 248.8 254 55.1
Phvul.001G131900 Phaseolus vulgaris HOM05D007273 ORTHO05D009230 7.3e-64 248.1 249 56.2
Eucgr.A02345 Eucalyptus grandis HOM05D007273 ORTHO05D009230 9.5e-64 247.7 246 56.1
Sp4g24020 Schrenkiella parvula HOM05D007273 ORTHO05D009230 1.6e-63 246.9 246 56.5
Glyma.03G136600 Glycine max HOM05D007273 ORTHO05D009230 2.8e-63 246.1 230 59.1
AL4G40060 Arabidopsis lyrata HOM05D007273 ORTHO05D009230 3.6e-63 245.7 237 56.5
VMungo1383G0084 Vigna mungo HOM05D007273 ORTHO05D009230 3.6e-63 245.7 248 56.9
AT2G41750 Arabidopsis thaliana HOM05D007273 ORTHO05D009230 4.7e-63 245.4 237 57.4
CsaV3_4G011670 Cucumis sativus L. HOM05D007273 ORTHO05D009230 4.7e-63 245.4 227 58.1
Aa31LG1G23760 Aethionema arabicum HOM05D007273 ORTHO05D009230 8.9e-62 241.1 246 57.3
Ca_08456_v3 Cicer arietinum L. HOM05D007273 ORTHO05D009230 2.6e-61 239.6 227 57.3
CARHR136850 Cardamine hirsuta HOM05D007273 ORTHO05D009230 3.4e-61 239.2 254 54.3
arahy.Tifrunner.gnm1.ann1.J7IQUN Arachis hypogaea HOM05D007273 ORTHO05D009230 4.4e-61 238.8 257 53.3
ClCG04G000150 Citrullus lanatus HOM05D007273 ORTHO05D009230 1.3e-60 237.3 218 57.3
Dinv12487 Davidia involucrata HOM05D007273 ORTHO05D009230 1.5e-56 223.8 238 52.9
Rhsim03G0024900 Rhododendron simsii HOM05D007273 ORTHO05D009230 8.1e-55 218.0 250 50.8
PGR004G1947 Punica granatum HOM05D007273 ORTHO05D009230 9.0e-54 214.5 200 56.5
Sed0019353 Sechium edule HOM05D007273 ORTHO05D009230 5.8e-53 211.8 244 51.6
Actinidia39224 Actinidia chinensis HOM05D007273 ORTHO05D009230 2.2e-52 209.9 228 52.6
Nn2g15217 Nelumbo nucifera HOM05D007273 ORTHO05D009230 4.9e-52 208.8 244 48.8
vmacro07848 Vaccinium macrocarpon HOM05D007273 ORTHO05D009230 7.1e-51 204.9 264 47.0
Oeu017941.1 Olea europaea HOM05D007273 ORTHO05D009230 1.3e-49 200.7 235 47.7
TAR369G0984 Trochodendron aralioides HOM05D007273 ORTHO05D009230 2.3e-49 199.9 243 46.5
Lsat_1_v5_gn_9_29100 Lactuca sativa HOM05D007273 ORTHO05D009230 3.0e-49 199.5 248 44.8
SGA_v2.0_scaffold69G23119 Striga asiatica HOM05D007273 ORTHO05D009230 3.9e-49 199.1 246 47.6
MSTRG.6428 Avicennia marina HOM05D007273 ORTHO05D009230 6.6e-49 198.4 232 45.7
Solyc02g087600.3 Solanum lycopersicum HOM05D007273 ORTHO05D009230 1.1e-48 197.6 235 46.0
SalBow6G5536 Salvia bowleyana HOM05D007273 ORTHO05D009230 1.9e-48 196.8 234 45.7
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 2.5e-48 196.4 233 45.5
ECA247G0394 Erigeron canadensis HOM05D007273 ORTHO05D009230 4.3e-48 195.7 238 45.8
HanXRQChr05g0128781 Helianthus annuus HOM05D007273 ORTHO05D009230 4.3e-48 195.7 236 48.7
PGSC0003DMG401001308 Solanum tuberosum HOM05D007273 ORTHO05D009230 4.3e-48 195.7 235 45.5
EL10Ac3g07092 Beta vulgaris HOM05D007273 ORTHO05D009230 5.6e-48 195.3 242 47.1
Migut.J01756 Erythranthe guttata HOM05D007273 ORTHO05D009230 7.3e-48 194.9 224 48.7
Sopen02g032350 Solanum pennellii HOM05D007273 ORTHO05D009230 1.3e-47 194.1 235 45.5
Cc06_g17580 Coffea canephora HOM05D007273 ORTHO05D009230 2.1e-47 193.4 243 46.5
Rhsim03G0024700 Rhododendron simsii HOM05D007273 ORTHO05D009230 8.1e-47 191.4 287 42.2
Aqoxy1G00330 Aquilegia oxysepala HOM05D007273 ORTHO05D009230 1.4e-46 190.7 237 48.9
Nitab4.5_0000082g0140 Nicotiana tabacum HOM05D007273 ORTHO05D009230 1.8e-46 190.3 262 42.7
Sc25g0005300 Simmondsia chinensis HOM05D007273 ORTHO05D009230 5.3e-46 188.7 235 47.2
DCAR_003245 Daucus carota HOM05D007273 ORTHO05D009230 1.2e-45 187.6 239 48.1
PSO384G4400 Papaver somniferum HOM05D007273 ORTHO05D009230 2.6e-45 186.4 243 46.9
AUR62024452 Chenopodium quinoa HOM05D007273 ORTHO05D009230 1.3e-44 184.1 250 44.8
AUR62026041 Chenopodium quinoa HOM05D007273 ORTHO05D009230 2.2e-44 183.3 230 45.7
PSO339G1789 Papaver somniferum HOM05D007273 ORTHO05D009230 3.8e-44 182.6 256 46.1
Peaxi162Scf00002g02715 Petunia axillaris HOM05D007273 ORTHO05D009230 3.8e-44 182.6 252 42.9
Nitab4.5_0010316g0010 Nicotiana tabacum HOM05D007273 ORTHO05D009230 2.5e-40 169.9 237 43.0
HPP92_016047 Vanilla planifolia HOM05D007273 ORTHO05D009230 1.4e-38 164.1 240 42.9
FAN09G1358 Fragaria x ananassa HOM05D007273 ORTHO05D009230 4.5e-37 159.1 149 57.0
MBI17_g14625_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 9.3e-35 151.4 237 41.8
Rhsim03G0024400 Rhododendron simsii HOM05D007273 ORTHO05D009230 3.5e-34 149.4 146 54.1
Rhsim03G0024300 Rhododendron simsii HOM05D007273 ORTHO05D009230 3.9e-33 146.0 146 52.7
SEGI_31103 Sequoiadendron giganteum HOM05D007273 ORTHO05D009230 2.8e-31 139.8 244 38.1
Os12g0142600 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 6.2e-31 138.7 263 37.6
MBI17_g36895_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 1.1e-30 137.9 237 40.1
Pp3c17_17160 Physcomitrium patens HOM05D007273 ORTHO05D009230 1.4e-30 137.5 290 33.8
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 3.1e-30 136.3 288 33.7
Os11g0145100 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 5.3e-30 135.6 256 37.5
FAN02G1642 Fragaria x ananassa HOM05D007273 ORTHO05D009230 2.6e-29 133.3 141 53.9
ATR0626G250 Amborella trichopoda HOM05D007273 ORTHO05D009230 6.5e-28 128.6 317 30.9
unitig_8.g4551 Utricularia gibba HOM05D007273 ORTHO05D009230 6.5e-28 128.6 124 53.2
Zm00001eb163370 Zea mays HOM05D007273 ORTHO05D009230 1.6e-26 124.0 235 34.9
Lju124C41T6 Lonicera japonica HOM05D007273 ORTHO05D009230 4.3e-24 115.9 103 55.3
Glyma.19G139000 Glycine max HOM05D007273 ORTHO05D009230 1.6e-23 114.0 97 60.8
SMO240G0020 Selaginella moellendorffii HOM05D007273 ORTHO05D009230 3.1e-22 109.8 192 39.6
Ah.04g151620 Amaranthus hybridus HOM05D007273 ORTHO05D009230 1.4e-19 100.9 228 33.8
Hma1.2p1_1611F.1_g293550 Hydrangea macrophylla HOM05D007273 ORTHO05D009230 5.1e-17 92.4 146 39.0
Rhsim03G0023900 Rhododendron simsii HOM05D007273 ORTHO05D009230 2.8e-15 86.7 146 39.0
AagrBONN_evm.TU.Sc2ySwM_228.793 Anthoceros agrestis HOM05D007273 ORTHO05D009230 3.1e-14 83.2 178 33.1
CSS0001142 Camellia sinensis var. sinensis HOM05D007273 ORTHO05D009230 1.6e-10 70.9 63 55.6
TPR.G3731 Trifolium pratense HOM05D007273 ORTHO05D009230 7.9e-10 68.6 60 61.7
Actinidia09327 Actinidia chinensis HOM05D007273 ORTHO05D009230 1.7e-07 60.8 97 38.1


User provided reference genes

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