Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 7.8e-123 443.7 214 100.0
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 1.8e-106 389.4 214 88.8
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 4.6e-99 364.8 213 78.4
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 8.7e-98 360.5 214 77.6
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 2.1e-96 355.9 212 78.3
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 1.1e-95 353.6 212 76.9
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 2.4e-95 352.4 213 77.5
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 4.1e-95 351.7 214 77.1
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 5.3e-95 351.3 212 76.4
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 2.0e-94 349.4 211 76.8
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 2.6e-94 349.0 211 76.8
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 2.6e-94 349.0 211 76.8
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 2.2e-93 345.9 206 75.7
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 1.1e-92 343.6 213 74.6
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 1.4e-92 343.2 214 75.2
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 3.2e-92 342.0 211 76.3
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 7.2e-92 340.9 214 74.8
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 1.2e-91 340.1 208 76.4
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 1.6e-91 339.7 213 76.1
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 2.7e-91 339.0 211 73.5
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 6.1e-91 337.8 210 73.3
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 1.0e-90 337.0 214 75.2
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 8.7e-90 334.0 214 72.0
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 1.9e-89 332.8 208 75.0
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 9.7e-89 330.5 219 72.1
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 1.8e-87 326.2 205 74.6
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 1.8e-87 326.2 215 71.2
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 2.4e-87 325.9 203 73.4
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 2.4e-87 325.9 210 72.4
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 4.1e-87 325.1 215 71.6
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 4.1e-87 325.1 214 70.6
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 5.3e-87 324.7 206 73.3
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 1.5e-86 323.2 215 70.2
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 1.5e-86 323.2 215 70.7
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 1.5e-86 323.2 213 69.5
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 4.5e-86 321.6 211 70.6
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 4.5e-86 321.6 208 73.6
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 2.2e-85 319.3 212 69.8
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 2.2e-85 319.3 213 69.0
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 2.9e-85 318.9 213 69.0
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 3.8e-85 318.5 213 70.4
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 3.8e-85 318.5 210 69.0
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 6.5e-85 317.8 219 66.7
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 6.5e-85 317.8 214 68.7
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 1.4e-84 316.6 214 69.6
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 1.9e-84 316.2 217 70.0
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 2.5e-84 315.8 213 69.0
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 2.5e-84 315.8 211 71.1
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 2.5e-84 315.8 207 68.1
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 4.2e-84 315.1 213 70.0
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 7.2e-84 314.3 210 67.6
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 7.2e-84 314.3 213 69.5
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 7.2e-84 314.3 210 70.5
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 9.4e-84 313.9 211 70.6
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 4.6e-83 311.6 210 68.1
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 1.4e-82 310.1 212 70.3
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 1.4e-82 310.1 213 68.1
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 1.8e-82 309.7 210 64.3
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 1.8e-82 309.7 212 68.9
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 3.0e-82 308.9 211 67.3
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 5.1e-82 308.1 210 63.3
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 8.8e-82 307.4 213 62.9
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 2.0e-81 306.2 210 63.3
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 9.7e-81 303.9 213 72.3
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 9.7e-81 303.9 212 68.9
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 1.3e-80 303.5 210 61.9
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 2.2e-80 302.8 210 64.3
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 3.1e-79 298.9 210 67.6
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 4.5e-78 295.0 200 69.0
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 4.5e-78 295.0 200 69.0
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 1.3e-77 293.5 224 58.9
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 1.3e-77 293.5 224 58.9
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 6.5e-77 291.2 209 66.5
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 6.5e-77 291.2 218 59.2
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 1.1e-76 290.4 195 68.7
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 9.4e-76 287.3 211 64.5
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 1.6e-75 286.6 230 56.1
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 7.9e-75 284.3 209 65.1
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 7.9e-75 284.3 212 68.9
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 5.1e-74 281.6 185 69.2
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 8.2e-72 274.2 175 73.1
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 1.6e-70 270.0 197 66.0
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 5.9e-70 268.1 196 64.8
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 6.5e-69 264.6 209 60.3
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 9.4e-68 260.8 206 62.6
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 9.4e-68 260.8 160 73.8
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 8.0e-67 257.7 229 57.2
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 8.2e-64 247.7 179 65.4
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 2.7e-62 242.7 211 54.5
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 4.5e-62 241.9 166 64.5
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 6.5e-61 238.0 171 69.6
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 8.5e-61 237.7 235 55.7
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 3.2e-60 235.7 170 62.4
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 1.2e-59 233.8 164 67.7
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 2.7e-59 232.6 202 56.4
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 6.8e-58 228.0 202 53.0
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 8.8e-50 201.1 212 49.1
FAN02G0118 Fragaria x ananassa HOM05D007137 ORTHO05D008982 7.5e-49 198.0 130 73.1
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 2.9e-45 186.0 178 50.6
Hma1.2p1_2520F.1_g323835 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 2.8e-43 179.5 108 76.9
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 1.0e-42 177.6 197 45.7
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 1.2e-41 174.1 209 44.5
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 6.8e-34 148.3 160 50.0
VMungo0720G0821 Vigna mungo HOM05D007137 ORTHO05D008982 1.6e-27 127.1 98 62.2
CSS0024811 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 2.6e-25 119.8 81 67.9
Zm00001eb286980 Zea mays HOM05D007137 ORTHO05D008982 4.4e-25 119.0 77 64.9
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 1.7e-21 107.1 88 53.4
SEGI_00420 Sequoiadendron giganteum HOM05D007137 ORTHO05D008982 1.1e-18 97.8 91 51.6
Cre04.g217912 Chlamydomonas reinhardtii HOM05D007137 ORTHO05D008982 4.0e-10 69.3 93 38.7
Rhsim03G0024500 Rhododendron simsii HOM05D007137 ORTHO05D008982 4.9e-08 62.4 58 53.4


User provided reference genes

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