Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 1.0e-114 416.8 219 100.0
Sabra06G0035600 Salix brachista HOM05D007490 ORTHO05D008750 1.8e-66 256.5 213 71.8
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 8.8e-37 157.9 217 49.8
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 8.2e-35 151.4 215 47.4
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 5.3e-34 148.7 214 47.7
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 2.9e-32 142.9 203 47.8
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 1.9e-31 140.2 184 49.5
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 9.4e-31 137.9 196 48.0
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 6.1e-30 135.2 193 46.1
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 6.1e-30 135.2 193 46.1
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 1.0e-29 134.4 193 44.6
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 1.4e-29 134.0 210 45.7
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 8.8e-29 131.3 207 49.3
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 8.8e-29 131.3 183 44.3
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 7.5e-28 128.3 206 41.3
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 1.1e-26 124.4 179 46.9
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 2.0e-25 120.2 197 42.1
MD12G1073500 Malus domestica HOM05D007490 ORTHO05D008750 2.7e-25 119.8 212 42.0
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 7.7e-25 118.2 223 37.2
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 4.2e-23 112.5 220 44.5
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 7.2e-23 111.7 119 55.5
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 8.0e-22 108.2 204 41.2
FvH4_6g23771 Fragaria vesca HOM05D007490 ORTHO05D008750 1.0e-21 107.8 202 41.6
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 1.4e-21 107.5 169 41.4
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 4.0e-21 105.9 177 43.5
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 4.0e-21 105.9 197 42.1
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 2.0e-20 103.6 235 37.9
arahy.Tifrunner.gnm1.ann1.QGQ977 Arachis hypogaea HOM05D007490 ORTHO05D008750 7.5e-20 101.7 169 40.8
Actinidia39227 Actinidia chinensis HOM05D007490 ORTHO05D008750 1.3e-19 100.9 173 43.4
AUR62024445 Chenopodium quinoa HOM05D007490 ORTHO05D008750 2.8e-19 99.8 208 39.4
TAR636G1914 Trochodendron aralioides HOM05D007490 ORTHO05D008750 2.8e-19 99.8 176 46.6
SHI15744 Sapria himalayana HOM05D007490 ORTHO05D008750 4.8e-19 99.0 211 37.9
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 6.3e-19 98.6 121 51.2
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 6.3e-19 98.6 152 42.8
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 1.4e-18 97.4 211 37.9
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 1.8e-18 97.1 200 39.0
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 2.4e-18 96.7 220 40.9
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 2.4e-18 96.7 196 39.3
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 4.1e-18 95.9 145 42.8
TWI74G0148 Tripterygium wilfordii HOM05D007490 ORTHO05D008750 7.0e-18 95.1 116 52.6
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 1.6e-17 94.0 205 38.5
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 2.7e-17 93.2 205 38.0
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 4.5e-17 92.4 187 37.4
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 5.9e-17 92.0 200 39.5
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 7.7e-17 91.7 193 38.9
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 7.7e-17 91.7 127 48.8
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 1.7e-16 90.5 189 38.1
Actinidia09331 Actinidia chinensis HOM05D007490 ORTHO05D008750 2.2e-16 90.1 169 40.2
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 2.2e-16 90.1 219 34.7
BcaC07g40379 Brassica carinata HOM05D007490 ORTHO05D008750 2.9e-16 89.7 192 40.1
Sabra19G0109900 Salix brachista HOM05D007490 ORTHO05D008750 2.9e-16 89.7 50 88.0
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 2.9e-16 89.7 176 40.3
Haze_19861 Corylus avellana HOM05D007490 ORTHO05D008750 3.8e-16 89.4 163 41.7
Cpa.g.sc92.48 Carica papaya HOM05D007490 ORTHO05D008750 5.0e-16 89.0 172 40.7
ECA236G0950 Erigeron canadensis HOM05D007490 ORTHO05D008750 6.5e-16 88.6 203 37.9
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 6.5e-16 88.6 171 40.9
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 8.5e-16 88.2 193 37.3
Nitab4.5_0005611g0010 Nicotiana tabacum HOM05D007490 ORTHO05D008750 1.1e-15 87.8 163 41.7
Carub.0005s2428 Capsella rubella HOM05D007490 ORTHO05D008750 1.5e-15 87.4 205 37.1
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 5.5e-15 85.5 198 37.4
CiPaw.09G038000 Carya illinoinensis HOM05D007490 ORTHO05D008750 7.2e-15 85.1 192 38.5
Migut.K00089 Erythranthe guttata HOM05D007490 ORTHO05D008750 7.2e-15 85.1 203 37.4
Solyc04g015730.3 Solanum lycopersicum HOM05D007490 ORTHO05D008750 1.2e-14 84.3 174 40.2
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 1.6e-14 84.0 200 35.5
VMungo0720G0884 Vigna mungo HOM05D007490 ORTHO05D008750 4.7e-14 82.4 201 40.3
Aqoxy3G01571 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 1.8e-13 80.5 199 38.7
Aqoxy5G00272 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 1.8e-13 80.5 58 65.5
Phvul.007G252900 Phaseolus vulgaris HOM05D007490 ORTHO05D008750 2.3e-13 80.1 196 38.3
SalBow3G0554 Salvia bowleyana HOM05D007490 ORTHO05D008750 2.3e-13 80.1 225 34.2
SGA_v2.0_scaffold273G46437 Striga asiatica HOM05D007490 ORTHO05D008750 4.0e-13 79.3 210 33.8
Duzib205G1398 Durio zibethinus HOM05D007490 ORTHO05D008750 5.2e-13 79.0 167 38.3
BcaC07g40383 Brassica carinata HOM05D007490 ORTHO05D008750 1.5e-12 77.4 74 54.1
unitig_0.g2659 Utricularia gibba HOM05D007490 ORTHO05D008750 3.4e-12 76.3 213 34.3
Psat6g119920 Pisum sativum HOM05D007490 ORTHO05D008750 4.4e-12 75.9 201 33.8
PSO384G3220 Papaver somniferum HOM05D007490 ORTHO05D008750 2.2e-11 73.6 168 34.5
SGA_v2.0_scaffold94G28485 Striga asiatica HOM05D007490 ORTHO05D008750 2.2e-11 73.6 215 34.4
Ca_26016_v3 Cicer arietinum L. HOM05D007490 ORTHO05D008750 3.7e-11 72.8 157 36.3
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 6.3e-11 72.0 205 32.7
C03p27950 Brassica napus HOM05D007490 ORTHO05D008750 8.3e-11 71.6 205 32.7
FAN02G3575 Fragaria x ananassa HOM05D007490 ORTHO05D008750 8.3e-11 71.6 179 35.8
BraA03t11560Z Brassica rapa HOM05D007490 ORTHO05D008750 1.1e-10 71.2 205 31.2
BolC3t15167H Brassica oleracea HOM05D007490 ORTHO05D008750 1.8e-10 70.5 205 32.7
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 2.4e-10 70.1 205 32.2
PSO339G3404 Papaver somniferum HOM05D007490 ORTHO05D008750 3.1e-10 69.7 204 31.9
MD14G1067100 Malus domestica HOM05D007490 ORTHO05D008750 5.4e-10 68.9 58 62.1
THA.LOC104804865 Tarenaya hassleriana HOM05D007490 ORTHO05D008750 9.2e-10 68.2 175 35.4
Medtr0100s0190 Medicago truncatula HOM05D007490 ORTHO05D008750 1.6e-09 67.4 191 32.5
SEGI_37898 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 7.8e-09 65.1 78 39.7
Solyc10g080140.2 Solanum lycopersicum HOM05D015445 ORTHO05D008750 2.3e-08 63.5 164 34.8
SEGI_24459 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 6.6e-08 62.0 81 48.1
Oeu033005.1 Olea europaea HOM05D007490 ORTHO05D008750 1.1e-07 61.2 131 38.9
PGSC0003DMG400023724 Solanum tuberosum HOM05D015445 ORTHO05D008750 1.1e-07 61.2 175 35.4
Lj5g0014197 Lotus japonicus HOM05D007490 ORTHO05D008750 2.5e-07 60.1 184 31.5
TPR.G10631 Trifolium pratense HOM05D007490 ORTHO05D008750 9.5e-07 58.2 199 31.2
SEGI_14290 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 1.2e-06 57.8 201 28.9
Lalb_Chr21g0316471 Lupinus albus HOM05D007490 ORTHO05D008750 6.1e-06 55.5 92 47.8


User provided reference genes

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