Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G050800 Populus trichocarpa HOM05D003654 ORTHO05D004176 4.0e-30 134.4 85 100.0
Sabra06G0035500 Salix brachista HOM05D000131 ORTHO05D004176 1.0e-20 103.2 81 74.1
Sabra16G0058500 Salix brachista HOM05D003654 ORTHO05D004176 1.1e-16 89.7 84 73.8
Potri.016G055901 Populus trichocarpa HOM05D003654 ORTHO05D004176 1.1e-14 83.2 83 73.5
Manes.08G050800 Manihot esculenta HOM05D003654 ORTHO05D004176 3.8e-12 74.7 83 67.5
Thecc.05G154000 Theobroma cacao HOM05D003654 ORTHO05D004176 1.9e-11 72.4 85 47.1
THA.LOC109117091 Tarenaya hassleriana HOM05D003654 ORTHO05D004176 2.3e-09 65.5 101 42.6
Hma1.2p1_2266F.1_g318450 Hydrangea macrophylla HOM05D003654 ORTHO05D004176 1.1e-08 63.2 84 45.2
TAR633G1637 Trochodendron aralioides HOM05D003654 ORTHO05D004176 3.3e-08 61.6 83 47.0
Hma1.2p1_2266F.1_g318440 Hydrangea macrophylla HOM05D003654 ORTHO05D004176 4.3e-08 61.2 89 43.8
BcaB02g07603 Brassica carinata HOM05D003654 ORTHO05D004176 1.3e-07 59.7 89 53.9
Sp5g05150 Schrenkiella parvula HOM05D003654 ORTHO05D004176 2.2e-07 58.9 88 50.0
Carub.0005s2429 Capsella rubella HOM05D003654 ORTHO05D004176 3.7e-07 58.2 83 42.2
BcaC02g09939 Brassica carinata HOM05D003654 ORTHO05D004176 4.8e-07 57.8 92 40.2
C04p34970 Brassica napus HOM05D003654 ORTHO05D004176 4.8e-07 57.8 92 40.2
BolC4t25052H Brassica oleracea HOM05D003654 ORTHO05D004176 4.8e-07 57.8 92 40.2
BraA04t16034Z Brassica rapa HOM05D003654 ORTHO05D004176 4.8e-07 57.8 92 52.2
DCAR_003222 Daucus carota HOM05D003654 ORTHO05D004176 4.8e-07 57.8 84 54.8
Hma1.2p1_2266F.1_g318430 Hydrangea macrophylla HOM05D003654 ORTHO05D004176 4.8e-07 57.8 76 44.7
Atru.chr1.1086 Acer truncatum HOM05D003654 ORTHO05D004176 8.2e-07 57.0 85 41.2
Cpa.g.c30295 Carica papaya HOM05D003654 ORTHO05D004176 8.2e-07 57.0 81 59.3
BcaC07g40382 Brassica carinata HOM05D003654 ORTHO05D004176 1.1e-06 56.6 88 39.8
A04p03110 Brassica napus HOM05D003654 ORTHO05D004176 1.1e-06 56.6 92 51.1
C08p32930 Brassica napus HOM05D003654 ORTHO05D004176 1.1e-06 56.6 88 39.8
BraA07t30006Z Brassica rapa HOM05D003654 ORTHO05D004176 1.4e-06 56.2 88 48.9
BcaC08g44845 Brassica carinata HOM05D003654 ORTHO05D004176 2.4e-06 55.5 88 51.1
BolC6t37599H Brassica oleracea HOM05D003654 ORTHO05D004176 2.4e-06 55.5 88 51.1
Cfa010801 Carpinus fangiana HOM05D003654 ORTHO05D004176 2.4e-06 55.5 83 55.4
COL.COLO4_28276 Corchorus olitorius HOM05D003654 ORTHO05D004176 2.4e-06 55.5 94 57.4
AL5G39020 Arabidopsis lyrata HOM05D003654 ORTHO05D004176 4.1e-06 54.7 89 50.6
BolC8t50897H Brassica oleracea HOM05D003654 ORTHO05D004176 4.1e-06 54.7 88 38.6
Eucgr.G03361 Eucalyptus grandis HOM05D003654 ORTHO05D004176 4.1e-06 54.7 83 60.2
BcaC07g40377 Brassica carinata HOM05D003654 ORTHO05D004176 5.3e-06 54.3 85 40.0
CSS0025582 Camellia sinensis var. sinensis HOM05D003654 ORTHO05D004176 5.3e-06 54.3 85 45.9
Prupe.7G061500 Prunus persica HOM05D003654 ORTHO05D004176 5.3e-06 54.3 89 56.2
Ciclev10006321m.g Citrus clementina HOM05D003654 ORTHO05D004176 6.9e-06 53.9 95 41.1
CARHR167650 Cardamine hirsuta HOM05D003654 ORTHO05D004176 9.1e-06 53.5 86 41.9
Eucgr.A02351 Eucalyptus grandis HOM05D003654 ORTHO05D004176 9.1e-06 53.5 83 54.2
Gohir.D09G118550 Gossypium hirsutum HOM05D003654 ORTHO05D004176 9.1e-06 53.5 86 38.4


User provided reference genes

Program Settings