Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G046800 Populus trichocarpa HOM05D007492 ORTHO05D009510 1.6e-56 222.6 122 100.0
Sabra06G0032400 Salix brachista HOM05D007492 ORTHO05D009510 6.0e-43 177.6 104 93.3
Manes.08G052300 Manihot esculenta HOM05D007492 ORTHO05D009510 2.5e-33 145.6 127 66.1
Gorai.006G135800 Gossypium raimondii HOM05D007492 ORTHO05D009510 8.4e-29 130.6 113 64.6
Gohir.D09G117400 Gossypium hirsutum HOM05D007492 ORTHO05D009510 2.4e-28 129.0 113 63.7
Cfa016781 Carpinus fangiana HOM05D007492 ORTHO05D009510 7.1e-28 127.5 101 66.3
Gohir.A09G121300 Gossypium hirsutum HOM05D007492 ORTHO05D009510 9.3e-28 127.1 113 63.7
arahy.Tifrunner.gnm1.ann1.BXP26X Arachis hypogaea HOM05D007492 ORTHO05D009510 4.6e-27 124.8 121 57.0
TWI77G0158 Tripterygium wilfordii HOM05D007492 ORTHO05D009510 7.8e-27 124.0 103 68.0
arahy.Tifrunner.gnm1.ann1.7L65TE Arachis hypogaea HOM05D007492 ORTHO05D009510 1.3e-26 123.2 121 56.2
QL07p003630 Quercus lobata HOM05D007492 ORTHO05D009510 1.3e-26 123.2 121 56.2
Thecc.05G151900 Theobroma cacao HOM05D007492 ORTHO05D009510 3.0e-26 122.1 113 63.7
CiPaw.10G035300 Carya illinoinensis HOM05D007492 ORTHO05D009510 3.9e-26 121.7 103 62.1
Duzib106G1025 Durio zibethinus HOM05D007492 ORTHO05D009510 8.7e-26 120.6 108 62.0
CANSAT80G1179 Cannabis sativa HOM05D007492 ORTHO05D009510 9.6e-25 117.1 96 66.7
CANSAT80G0939 Cannabis sativa HOM05D007492 ORTHO05D009510 2.1e-24 115.9 96 66.7
Lj5g0022766 Lotus japonicus HOM05D007492 ORTHO05D009510 3.6e-24 115.2 122 54.9
TAR636G3489 Trochodendron aralioides HOM05D007492 ORTHO05D009510 3.6e-24 115.2 105 62.9
MD12G1082300 Malus domestica HOM05D007492 ORTHO05D009510 1.1e-23 113.6 103 59.2
Ca_12247_v3 Cicer arietinum L. HOM05D007492 ORTHO05D009510 1.8e-23 112.8 121 52.1
Psat0s33g0080 Pisum sativum HOM05D007492 ORTHO05D009510 2.4e-23 112.5 121 51.2
Phvul.007G250800 Phaseolus vulgaris HOM05D007492 ORTHO05D009510 3.1e-23 112.1 92 60.9
Glyma.10G107400 Glycine max HOM05D007492 ORTHO05D009510 4.0e-23 111.7 100 60.0
Medtr1g052270 Medicago truncatula HOM05D007492 ORTHO05D009510 9.0e-23 110.5 121 52.9
MSTRG.19841 Avicennia marina HOM05D007492 ORTHO05D009510 1.5e-22 109.8 95 64.2
Lalb_Chr21g0316561 Lupinus albus HOM05D007492 ORTHO05D009510 2.0e-22 109.4 92 57.6
SalBow6G0030 Salvia bowleyana HOM05D007492 ORTHO05D009510 4.4e-22 108.2 95 60.0
SalBow6G0474 Salvia bowleyana HOM05D007492 ORTHO05D009510 4.4e-22 108.2 95 60.0
Dinv39655 Davidia involucrata HOM05D007492 ORTHO05D009510 1.7e-21 106.3 94 60.6
Sed0027371 Sechium edule HOM05D007492 ORTHO05D009510 2.9e-21 105.5 92 62.0
PGR004G0419 Punica granatum HOM05D007492 ORTHO05D009510 6.4e-21 104.4 107 56.1
Cc06_g18080 Coffea canephora HOM05D007492 ORTHO05D009510 1.9e-20 102.8 99 56.6
Prupe.7G053700 Prunus persica HOM05D007492 ORTHO05D009510 1.9e-20 102.8 102 55.9
Eucgr.K01714 Eucalyptus grandis HOM05D007492 ORTHO05D009510 3.2e-20 102.1 100 56.0
Eucgr.K02018 Eucalyptus grandis HOM05D007492 ORTHO05D009510 3.2e-20 102.1 100 56.0
Oeu023131.1 Olea europaea HOM05D007492 ORTHO05D009510 5.4e-20 101.3 97 54.6
Rhsim04G0106100 Rhododendron simsii HOM05D007492 ORTHO05D009510 5.4e-20 101.3 103 59.2
Atru.chr1.1236 Acer truncatum HOM05D007492 ORTHO05D009510 7.1e-20 100.9 89 60.7
RcHm_v2.0_Chr3g0483561 Rosa chinensis HOM05D007492 ORTHO05D009510 1.2e-19 100.1 100 57.0
TPR.G19665 Trifolium pratense HOM05D007492 ORTHO05D009510 1.2e-19 100.1 136 45.6
Hund19134 Selenicereus undatus HOM05D007492 ORTHO05D009510 1.6e-19 99.8 94 57.4
ClCG04G003670 Citrullus lanatus HOM05D007492 ORTHO05D009510 6.0e-19 97.8 92 58.7
SGA_v2.0_scaffold105G30374 Striga asiatica HOM05D007492 ORTHO05D009510 6.0e-19 97.8 95 55.8
Ciclev10005969m.g Citrus clementina HOM05D007492 ORTHO05D009510 7.9e-19 97.4 158 43.0
Actinidia38130 Actinidia chinensis HOM05D007492 ORTHO05D009510 1.0e-18 97.1 105 52.4
Migut.J01728 Erythranthe guttata HOM05D007492 ORTHO05D009510 1.3e-18 96.7 93 59.1
DCAR_013612 Daucus carota HOM05D007492 ORTHO05D009510 1.7e-18 96.3 106 52.8
FAN05G0111 Fragaria x ananassa HOM05D007492 ORTHO05D009510 1.7e-18 96.3 100 56.0
FAN14G3877 Fragaria x ananassa HOM05D007492 ORTHO05D009510 1.7e-18 96.3 100 56.0
FAN02G2710 Fragaria x ananassa HOM05D007492 ORTHO05D009510 3.9e-18 95.1 100 55.0
Sc19g0006630 Simmondsia chinensis HOM05D007492 ORTHO05D009510 3.9e-18 95.1 95 51.6
Haze_19797 Corylus avellana HOM05D007492 ORTHO05D009510 5.1e-18 94.7 130 47.7
AUR62026094 Chenopodium quinoa HOM05D007492 ORTHO05D009510 6.6e-18 94.4 98 55.1
Haze_19793 Corylus avellana HOM05D007492 ORTHO05D009510 1.5e-17 93.2 130 46.9
Hma1.2p1_0005F.1_g004460 Hydrangea macrophylla HOM05D007492 ORTHO05D009510 5.6e-17 91.3 108 52.8
PGSC0003DMG400012711 Solanum tuberosum HOM05D007492 ORTHO05D009510 9.6e-17 90.5 97 55.7
Peaxi162Scf00130g00832 Petunia axillaris HOM05D007492 ORTHO05D009510 1.6e-16 89.7 90 57.8
Sopen04g008400 Solanum pennellii HOM05D007492 ORTHO05D009510 3.6e-16 88.6 97 54.6
GSVIVG01033234001 Vitis vinifera HOM05D007492 ORTHO05D009510 3.6e-16 88.6 83 60.2
CDE04G0450 Ceratophyllum demersum HOM05D007492 ORTHO05D009510 6.2e-16 87.8 95 53.7
Nitab4.5_0000826g0210 Nicotiana tabacum HOM05D007492 ORTHO05D009510 6.2e-16 87.8 97 54.6
Solyc04g150113.1 Solanum lycopersicum HOM05D007492 ORTHO05D009510 6.2e-16 87.8 97 54.6
Os07g0661700 Oryza sativa ssp. japonica HOM05D007492 ORTHO05D009510 1.4e-15 86.7 101 46.5
AL5G38860 Arabidopsis lyrata HOM05D007492 ORTHO05D009510 4.0e-15 85.1 90 50.0
vmacro09057 Vaccinium macrocarpon HOM05D007492 ORTHO05D009510 5.3e-15 84.7 88 54.5
Lsat_1_v5_gn_5_160860 Lactuca sativa HOM05D007492 ORTHO05D009510 9.0e-15 84.0 117 43.6
BcaB02g07611 Brassica carinata HOM05D007492 ORTHO05D009510 2.0e-14 82.8 94 46.8
BraA07t29999Z Brassica rapa HOM05D007492 ORTHO05D009510 2.6e-14 82.4 94 46.8
CARHR167510 Cardamine hirsuta HOM05D007492 ORTHO05D009510 2.6e-14 82.4 90 50.0
A07p23340 Brassica napus HOM05D007492 ORTHO05D009510 3.4e-14 82.0 103 45.6
THA.LOC104802018 Tarenaya hassleriana HOM05D007492 ORTHO05D009510 3.4e-14 82.0 95 48.4
BcaC08g44833 Brassica carinata HOM05D007492 ORTHO05D009510 4.5e-14 81.6 103 45.6
C06p24390 Brassica napus HOM05D007492 ORTHO05D009510 4.5e-14 81.6 103 45.6
Cpa.g.sc1210.1 Carica papaya HOM05D007492 ORTHO05D009510 4.5e-14 81.6 99 46.5
Carub.0005s2417 Capsella rubella HOM05D007492 ORTHO05D009510 5.8e-14 81.3 99 43.4
BolC6t37587H Brassica oleracea HOM05D007492 ORTHO05D009510 9.9e-14 80.5 103 44.7
Sp5g05280 Schrenkiella parvula HOM05D007492 ORTHO05D009510 9.9e-14 80.5 93 46.2
ATR0721G123 Amborella trichopoda HOM05D007492 ORTHO05D009510 4.9e-13 78.2 99 49.5
MELO3C026338.2 Cucumis melo HOM05D007492 ORTHO05D009510 4.9e-13 78.2 63 66.7
HPP92_012476 Vanilla planifolia HOM05D007492 ORTHO05D009510 4.9e-13 78.2 110 45.5
Zm00001eb329920 Zea mays HOM05D007492 ORTHO05D009510 8.4e-13 77.4 92 48.9
HPP92_012551 Vanilla planifolia HOM05D007492 ORTHO05D009510 1.4e-12 76.6 110 44.5
ECA248G1814 Erigeron canadensis HOM05D007492 ORTHO05D009510 2.4e-12 75.9 92 44.6
EL10Ac3g07135 Beta vulgaris HOM05D007492 ORTHO05D009510 1.2e-11 73.6 98 48.0
HanXRQChr13g0395971 Helianthus annuus HOM05D007492 ORTHO05D009510 1.2e-11 73.6 92 46.7
Aqoxy2G00252 Aquilegia oxysepala HOM05D007492 ORTHO05D009510 2.1e-11 72.8 100 45.0
Pp3c18_6860 Physcomitrium patens HOM05D007492 ORTHO05D009510 6.0e-11 71.2 109 44.0
Aa31LG10G12190 Aethionema arabicum HOM05D007492 ORTHO05D009510 5.6e-09 64.7 98 41.8
Mapoly0061s0071 Marchantia polymorpha HOM05D007492 ORTHO05D009510 4.8e-08 61.6 105 40.0
AagrBONN_evm.TU.Sc2ySwM_228.377 Anthoceros agrestis HOM05D007492 ORTHO05D009510 6.2e-08 61.2 91 42.9
MBI13_g15315_MAGBIO Magnolia biondii HOM05D007492 ORTHO05D009510 1.1e-07 60.5 150 34.0
Nitab4.5_0001618g0280 Nicotiana tabacum HOM05D007492 ORTHO05D009510 1.1e-07 60.5 81 45.7
Zm00001eb195500 Zea mays HOM05D007492 ORTHO05D009510 2.6e-06 55.8 88 39.8
MBI13_g30326_MAGBIO Magnolia biondii HOM05D007492 ORTHO05D009510 3.4e-06 55.5 81 45.7
Zm00001eb380160 Zea mays HOM05D007492 ORTHO05D009510 3.4e-06 55.5 84 42.9
AUR62024507 Chenopodium quinoa HOM05D007492 ORTHO05D009510 5.8e-06 54.7 106 37.7


User provided reference genes

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