Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G038600 Populus trichocarpa HOM05D007488 ORTHO05D009461 1.0e-114 416.8 215 100.0
Manes.09G005400 Manihot esculenta HOM05D007488 ORTHO05D009461 1.2e-43 180.6 169 56.2
TWI74G0203 Tripterygium wilfordii HOM05D007488 ORTHO05D009461 8.1e-43 177.9 220 45.9
Rhsim03G0039700 Rhododendron simsii HOM05D007488 ORTHO05D009461 4.6e-38 162.2 169 49.7
Ciclev10006109m.g Citrus clementina HOM05D007488 ORTHO05D009461 3.0e-37 159.5 169 49.7
Haze_15889 Corylus avellana HOM05D007488 ORTHO05D009461 7.3e-36 154.8 169 49.7
Lsat_1_v5_gn_5_157940 Lactuca sativa HOM05D007488 ORTHO05D009461 2.8e-35 152.9 175 50.3
Cfa003623 Carpinus fangiana HOM05D007488 ORTHO05D009461 4.0e-34 149.1 169 46.2
Actinidia01825 Actinidia chinensis HOM05D007488 ORTHO05D009461 6.8e-34 148.3 215 43.3
MD14G1087900 Malus domestica HOM05D007488 ORTHO05D009461 3.4e-33 146.0 170 44.1
Eucgr.A02247 Eucalyptus grandis HOM05D007488 ORTHO05D009461 2.2e-32 143.3 167 44.9
Hund19096 Selenicereus undatus HOM05D007488 ORTHO05D009461 2.9e-32 142.9 215 40.0
Cc06_g19180 Coffea canephora HOM05D007488 ORTHO05D009461 4.9e-32 142.1 168 45.2
MSTRG.19810 Avicennia marina HOM05D007488 ORTHO05D009461 8.4e-32 141.4 169 45.6
HanXRQChr03g0061531 Helianthus annuus HOM05D007488 ORTHO05D009461 5.4e-31 138.7 175 45.1
AL4G39170 Arabidopsis lyrata HOM05D007488 ORTHO05D009461 7.1e-31 138.3 118 58.5
Psat3g078680 Pisum sativum HOM05D007488 ORTHO05D009461 7.1e-31 138.3 215 39.1
Ca_08393_v3 Cicer arietinum L. HOM05D007488 ORTHO05D009461 9.2e-31 137.9 215 39.1
Dinv09710 Davidia involucrata HOM05D007488 ORTHO05D009461 9.2e-31 137.9 169 47.9
ECA248G2641 Erigeron canadensis HOM05D007488 ORTHO05D009461 1.2e-30 137.5 149 51.0
PGR142G4416 Punica granatum HOM05D007488 ORTHO05D009461 1.6e-30 137.1 169 42.0
AT2G41200 Arabidopsis thaliana HOM05D007488 ORTHO05D009461 2.1e-30 136.7 118 57.6
BcaB01g03485 Brassica carinata HOM05D007488 ORTHO05D009461 2.7e-30 136.3 118 55.9
Medtr7g089940 Medicago truncatula HOM05D007488 ORTHO05D009461 4.6e-30 135.6 215 38.6
BcaC01g05355 Brassica carinata HOM05D007488 ORTHO05D009461 6.0e-30 135.2 118 55.9
A03p23120 Brassica napus HOM05D007488 ORTHO05D009461 6.0e-30 135.2 118 55.9
C03p27550 Brassica napus HOM05D007488 ORTHO05D009461 6.0e-30 135.2 118 55.9
BolC3t15128H Brassica oleracea HOM05D007488 ORTHO05D009461 6.0e-30 135.2 118 55.9
BraA03t11533Z Brassica rapa HOM05D007488 ORTHO05D009461 6.0e-30 135.2 118 55.9
CARHR136300 Cardamine hirsuta HOM05D007488 ORTHO05D009461 6.0e-30 135.2 118 56.8
Thhalv10017345m.g Eutrema salsugineum HOM05D007488 ORTHO05D009461 6.0e-30 135.2 118 57.6
Sp4g23500 Schrenkiella parvula HOM05D007488 ORTHO05D009461 1.0e-29 134.4 118 56.8
Peaxi162Scf00076g00524 Petunia axillaris HOM05D007488 ORTHO05D009461 1.3e-29 134.0 117 50.4
Carub.0004s2351 Capsella rubella HOM05D007488 ORTHO05D009461 1.7e-29 133.7 130 52.3
Sc18g0003830 Simmondsia chinensis HOM05D007488 ORTHO05D009461 1.7e-29 133.7 132 47.7
THA.LOC104803261 Tarenaya hassleriana HOM05D007488 ORTHO05D009461 1.7e-29 133.7 177 42.4
DCAR_016880 Daucus carota HOM05D007488 ORTHO05D009461 2.3e-29 133.3 168 45.8
Cpa.g.sc5.171 Carica papaya HOM05D007488 ORTHO05D009461 3.9e-29 132.5 149 47.7
CiPaw.09G047600 Carya illinoinensis HOM05D007488 ORTHO05D009461 3.9e-29 132.5 169 45.0
Migut.K00133 Erythranthe guttata HOM05D007488 ORTHO05D009461 6.6e-29 131.7 168 44.0
QL07p010346 Quercus lobata HOM05D007488 ORTHO05D009461 3.3e-28 129.4 167 43.1
Aqoxy2G00394 Aquilegia oxysepala HOM05D007488 ORTHO05D009461 4.3e-28 129.0 200 39.0
Prupe.7G038600 Prunus persica HOM05D007488 ORTHO05D009461 7.3e-28 128.3 239 36.0
TPR.G30624 Trifolium pratense HOM05D007488 ORTHO05D009461 7.3e-28 128.3 215 37.7
Atru.chr1.1442 Acer truncatum HOM05D007488 ORTHO05D009461 1.2e-27 127.5 169 45.0
Lalb_Chr22g0357421 Lupinus albus HOM05D007488 ORTHO05D009461 1.2e-27 127.5 216 38.4
AUR62030320 Chenopodium quinoa HOM05D007488 ORTHO05D009461 2.1e-27 126.7 117 52.1
Nitab4.5_0000812g0120 Nicotiana tabacum HOM05D007488 ORTHO05D009461 2.8e-27 126.3 185 38.4
Lj1g0022068 Lotus japonicus HOM05D007488 ORTHO05D009461 4.7e-27 125.6 217 35.5
TAR369G0408 Trochodendron aralioides HOM05D007488 ORTHO05D009461 4.7e-27 125.6 168 47.6
Nitab4.5_0001937g0020 Nicotiana tabacum HOM05D007488 ORTHO05D009461 1.8e-26 123.6 170 38.8
Ah.04g150940 Amaranthus hybridus HOM05D007488 ORTHO05D009461 3.1e-26 122.9 106 55.7
AUR62018346 Chenopodium quinoa HOM05D007488 ORTHO05D009461 5.2e-26 122.1 117 52.1
Nn4g25823 Nelumbo nucifera HOM05D007488 ORTHO05D009461 5.2e-26 122.1 120 52.5
Sopen03g012080 Solanum pennellii HOM05D007488 ORTHO05D009461 6.9e-26 121.7 121 46.3
Nitab4.5_0000424g0040 Nicotiana tabacum HOM05D007488 ORTHO05D009461 8.9e-26 121.3 132 47.0
Nitab4.5_0006279g0050 Nicotiana tabacum HOM05D007488 ORTHO05D009461 1.2e-25 120.9 185 37.3
SalBow1G5076 Salvia bowleyana HOM05D007488 ORTHO05D009461 1.2e-25 120.9 176 39.8
SalBow1G6194 Salvia bowleyana HOM05D007488 ORTHO05D009461 1.2e-25 120.9 176 39.8
EL10Ac3g07236 Beta vulgaris HOM05D007488 ORTHO05D009461 5.8e-25 118.6 117 50.4
FAN05G4359 Fragaria x ananassa HOM05D007488 ORTHO05D009461 1.3e-24 117.5 201 37.8
VMungo1383G0792 Vigna mungo HOM05D007488 ORTHO05D009461 1.3e-24 117.5 172 40.7
Glyma.19G130600 Glycine max HOM05D007488 ORTHO05D009461 2.9e-24 116.3 151 45.7
CAN.G317.6 Capsicum annuum HOM05D007488 ORTHO05D009461 3.8e-24 115.9 127 45.7
Oeu063781.2 Olea europaea HOM05D004518 ORTHO05D005434 3.8e-24 115.9 108 50.9
arahy.Tifrunner.gnm1.ann1.Z4B7ZU Arachis hypogaea HOM05D007488 ORTHO05D009461 4.9e-24 115.5 221 34.8
Duzib106G1788 Durio zibethinus HOM05D007488 ORTHO05D009461 4.9e-24 115.5 172 40.7
SGA_v2.0_scaffold94G28540 Striga asiatica HOM05D007488 ORTHO05D009461 6.4e-24 115.2 159 40.3
FvH4_6g45840 Fragaria vesca HOM05D007488 ORTHO05D009461 1.1e-23 114.4 201 38.3
Thecc.05G135000 Theobroma cacao HOM05D007488 ORTHO05D009461 1.9e-23 113.6 175 40.6
Gohir.D11G322700 Gossypium hirsutum HOM05D007488 ORTHO05D009461 2.4e-23 113.2 150 42.7
Glyma.03G128000 Glycine max HOM05D007488 ORTHO05D009461 4.2e-23 112.5 120 49.2
Phvul.001G123700 Phaseolus vulgaris HOM05D007488 ORTHO05D009461 4.2e-23 112.5 174 37.9
Gorai.007G352800 Gossypium raimondii HOM05D007488 ORTHO05D009461 7.1e-23 111.7 150 41.3
RcHm_v2.0_Chr2g0164041 Rosa chinensis HOM05D007488 ORTHO05D009461 7.1e-23 111.7 117 43.6
Gohir.A11G307200 Gossypium hirsutum HOM05D007488 ORTHO05D009461 1.2e-22 110.9 150 42.0
CANSAT64G0776 Cannabis sativa HOM05D007488 ORTHO05D009461 2.7e-22 109.8 136 44.1
FAN02G3897 Fragaria x ananassa HOM05D007488 ORTHO05D009461 2.7e-22 109.8 201 35.3
Aa31LG3G800 Aethionema arabicum HOM05D007488 ORTHO05D009461 4.6e-22 109.0 84 58.3
PSO339G1058 Papaver somniferum HOM05D007488 ORTHO05D009461 1.7e-21 107.1 115 45.2
arahy.Tifrunner.gnm1.ann1.8RZU3Q Arachis hypogaea HOM05D007488 ORTHO05D009461 3.0e-21 106.3 222 34.7
BcaC02g12760 Brassica carinata HOM05D007488 ORTHO05D009461 6.6e-21 105.1 103 47.6
Peaxi162Scf00701g00057 Petunia axillaris HOM05D007488 ORTHO05D009461 1.9e-20 103.6 77 57.1
Lj1P1093T64 Lonicera japonica HOM05D007488 ORTHO05D009461 1.6e-19 100.5 83 55.4
Sopen10g029120 Solanum pennellii HOM05D000484 ORTHO05D000346 4.8e-19 99.0 174 32.8
C04p02520 Brassica napus HOM05D007488 ORTHO05D009461 8.1e-19 98.2 96 50.0
FAN14G1565 Fragaria x ananassa HOM05D007488 ORTHO05D009461 1.5e-17 94.0 78 55.1
GSVIVG01033626001 Vitis vinifera HOM05D007488 ORTHO05D009461 1.5e-17 94.0 124 39.5
BolC4t21895H Brassica oleracea HOM05D007488 ORTHO05D009461 3.4e-17 92.8 82 53.7
PSO384G4473 Papaver somniferum HOM05D007488 ORTHO05D009461 1.1e-15 87.8 83 47.0
CDE09G0800 Ceratophyllum demersum HOM05D007488 ORTHO05D009461 7.1e-15 85.1 121 41.3
A05p02110 Brassica napus HOM05D007488 ORTHO05D009461 1.0e-13 81.3 92 45.7
BraA05t19207Z Brassica rapa HOM05D007488 ORTHO05D009461 1.0e-13 81.3 92 45.7
Solyc03g058440.1 Solanum lycopersicum HOM05D007488 ORTHO05D009461 2.3e-13 80.1 66 54.5
FAN09G2471 Fragaria x ananassa HOM05D007488 ORTHO05D009461 3.1e-10 69.7 163 32.5
MBI18_g37945_MAGBIO Magnolia biondii HOM05D007488 ORTHO05D009461 6.9e-10 68.6 174 35.1
Zm00001eb347080 Zea mays HOM05D007488 ORTHO05D009461 2.4e-07 60.1 134 26.1
MBI13_g11934_MAGBIO Magnolia biondii HOM05D007488 ORTHO05D009461 2.1e-06 57.0 70 45.7


User provided reference genes

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