Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G034375 Populus trichocarpa HOM05D009287 ORTHO05D008136 1.5e-115 419.5 209 100.0
Sabra06G0022800 Salix brachista HOM05D008848 ORTHO05D008136 3.2e-44 182.6 190 52.6
Potri.006G034450 Populus trichocarpa HOM05D008848 ORTHO05D008136 5.3e-39 165.2 175 51.4
Potri.016G032783 Populus trichocarpa HOM05D008848 ORTHO05D008136 5.4e-28 128.6 143 51.0
Manes.17G056250 Manihot esculenta HOM05D008848 ORTHO05D008136 4.5e-22 109.0 155 50.3
QL07p012914 Quercus lobata HOM05D008848 ORTHO05D008136 1.2e-19 100.9 207 35.3
QL07p012771 Quercus lobata HOM05D008848 ORTHO05D008136 1.0e-18 97.8 207 33.3
QL01p050041 Quercus lobata HOM05D008848 ORTHO05D008136 1.1e-17 94.4 175 35.4
Rhsim03G0062000 Rhododendron simsii HOM05D009287 ORTHO05D008136 4.3e-17 92.4 191 35.6
Rhsim07G0111400 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.4e-15 87.4 151 37.7
Dinv21660 Davidia involucrata HOM05D008848 ORTHO05D008136 2.4e-15 86.7 138 45.7
Rhsim07G0111700 Rhododendron simsii HOM05D008848 ORTHO05D008136 3.1e-15 86.3 142 38.7
Actinidia14403 Actinidia chinensis HOM05D009466 ORTHO05D008136 4.0e-15 85.9 181 35.9
Dinv21661 Davidia involucrata HOM05D008848 ORTHO05D008136 4.0e-15 85.9 132 46.2
Rhsim07G0111800 Rhododendron simsii HOM05D008848 ORTHO05D008136 4.0e-15 85.9 156 37.2
Rhsim07G0110900 Rhododendron simsii HOM05D008848 ORTHO05D008136 5.3e-15 85.5 179 35.8
Rhsim03G0061900 Rhododendron simsii HOM05D009287 ORTHO05D008136 9.0e-15 84.7 202 36.6
Rhsim07G0111200 Rhododendron simsii HOM05D008848 ORTHO05D008136 9.0e-15 84.7 154 37.0
Rhsim07G0111900 Rhododendron simsii HOM05D008848 ORTHO05D008136 1.5e-14 84.0 155 34.8
Rhsim07G0114600 Rhododendron simsii HOM05D009466 ORTHO05D010516 1.5e-14 84.0 150 33.3
Rhsim07G0111500 Rhododendron simsii HOM05D008848 ORTHO05D008136 2.6e-14 83.2 133 39.1
Rhsim07G0113000 Rhododendron simsii HOM05D009466 ORTHO05D008136 2.6e-14 83.2 183 31.7
Manes.12G004101 Manihot esculenta HOM05D008848 ORTHO05D008136 4.5e-14 82.4 145 36.6
Rhsim07G0112300 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.8e-14 82.0 149 34.2
Nitab4.5_0001381g0030 Nicotiana tabacum HOM05D008848 ORTHO05D008136 1.7e-13 80.5 124 42.7
Rhsim07G0111000 Rhododendron simsii HOM05D009466 ORTHO05D008136 8.4e-13 78.2 149 34.9
vmacro14065 Vaccinium macrocarpon HOM05D009466 ORTHO05D008136 1.4e-12 77.4 143 35.7
QL01p050108 Quercus lobata HOM05D008848 ORTHO05D008136 1.9e-12 77.0 160 35.0
Rhsim07G0114900 Rhododendron simsii HOM05D009466 ORTHO05D008136 3.2e-12 76.3 146 35.6
Rhsim07G0111100 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.5e-12 75.5 124 37.1
Nitab4.5_0001590g0010 Nicotiana tabacum HOM05D008848 ORTHO05D008136 9.3e-12 74.7 127 41.7
Solyc08g078360.1 Solanum lycopersicum HOM05D008848 ORTHO05D008136 9.3e-12 74.7 127 40.2
Oeu036307.1 Olea europaea HOM05D009287 ORTHO05D008136 1.2e-11 74.3 129 38.8
Peaxi162Scf00155g00133 Petunia axillaris HOM05D008848 ORTHO05D008136 2.1e-11 73.6 127 37.8
Oeu018043.1 Olea europaea HOM05D009287 ORTHO05D008136 2.7e-11 73.2 106 47.2
Oeu020786.1 Olea europaea HOM05D009287 ORTHO05D008136 4.6e-11 72.4 152 35.5
Rhsim07G0113100 Rhododendron simsii HOM05D009466 ORTHO05D008136 4.6e-11 72.4 146 34.2
Rhsim07G0112600 Rhododendron simsii HOM05D009466 ORTHO05D008136 6.1e-11 72.0 169 31.4
Oeu034457.1 Olea europaea HOM05D009287 ORTHO05D008136 1.0e-10 71.2 149 35.6
Oeu020784.1 Olea europaea HOM05D009287 ORTHO05D008136 1.8e-10 70.5 133 36.1
Oeu020787.1 Olea europaea HOM05D009287 ORTHO05D008136 3.0e-10 69.7 149 33.6
Oeu020785.1 Olea europaea HOM05D009287 ORTHO05D008136 5.1e-10 68.9 149 34.9
Oeu026046.1 Olea europaea HOM05D009287 ORTHO05D008136 6.7e-10 68.6 140 37.9
Ciclev10006726m.g Citrus clementina HOM05D010926 ORTHO05D011735 1.1e-09 67.8 143 32.9
Oeu015942.1 Olea europaea HOM05D009287 ORTHO05D008136 1.5e-09 67.4 142 35.2
Rhsim05G0025800 Rhododendron simsii HOM05D009466 ORTHO05D008136 1.5e-09 67.4 125 35.2
Prupe.2G179900 Prunus persica HOM05D015530 ORTHO05D008136 3.3e-09 66.2 134 36.6
Oeu020788.1 Olea europaea HOM05D009287 ORTHO05D008136 4.3e-09 65.9 142 34.5
Ciclev10006601m.g Citrus clementina HOM05D010926 ORTHO05D011735 5.7e-09 65.5 103 37.9
Peaxi162Scf00102g00938 Petunia axillaris HOM05D008848 ORTHO05D008136 7.4e-09 65.1 129 34.1
Oeu015938.1 Olea europaea HOM05D009287 ORTHO05D008136 9.7e-09 64.7 105 45.7
Peaxi162Scf01083g00013 Petunia axillaris HOM05D008848 ORTHO05D008136 9.7e-09 64.7 126 33.3
Actinidia31512 Actinidia chinensis HOM05D008848 ORTHO05D008136 3.7e-08 62.8 137 38.7
Oeu034177.1 Olea europaea HOM05D009287 ORTHO05D008136 6.3e-08 62.0 97 44.3
Hma1.2p1_0316F.1_g122780 Hydrangea macrophylla HOM05D010926 ORTHO05D008136 8.2e-08 61.6 117 37.6
Oeu026050.1 Olea europaea HOM05D009287 ORTHO05D008136 1.1e-07 61.2 112 40.2
MD07G1115400 Malus domestica HOM05D010926 ORTHO05D011735 5.3e-07 58.9 105 37.1
GSVIVG01019271001 Vitis vinifera HOM05D008848 ORTHO05D008136 6.9e-07 58.5 146 29.5
Oeu010648.1 Olea europaea HOM05D009287 ORTHO05D008136 9.0e-07 58.2 104 41.3
Rhsim05G0025300 Rhododendron simsii HOM05D009466 ORTHO05D008136 9.0e-07 58.2 125 32.8
Dinv06358 Davidia involucrata HOM05D028634 ORTHO05D022500 1.5e-06 57.4 160 33.1
Oeu015646.1 Olea europaea HOM05D009287 ORTHO05D008136 1.5e-06 57.4 63 52.4
QL04p038305 Quercus lobata HOM05D010926 ORTHO05D011735 1.5e-06 57.4 107 33.6
QL04p038362 Quercus lobata HOM05D010926 ORTHO05D011735 2.0e-06 57.0 106 33.0
Nitab4.5_0000190g0220 Nicotiana tabacum HOM05D008848 ORTHO05D049370 2.6e-06 56.6 117 31.6
Oeu036304.1 Olea europaea HOM05D009287 ORTHO05D008136 3.4e-06 56.2 74 47.3
Rhsim05G0036000 Rhododendron simsii HOM05D009466 ORTHO05D008136 5.9e-06 55.5 125 32.8


User provided reference genes

Program Settings