Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G028500 Populus trichocarpa HOM05D005060 ORTHO05D005975 1.5e-61 239.6 142 100.0
Potri.006G029500 Populus trichocarpa HOM05D005060 ORTHO05D005975 3.7e-60 235.0 142 90.8
Sabra06G0020700 Salix brachista HOM05D005060 ORTHO05D005975 1.1e-43 180.3 175 68.0
Potri.006G028101 Populus trichocarpa HOM05D005060 ORTHO05D005975 3.5e-26 122.1 95 82.1
Manes.08G066600 Manihot esculenta HOM05D005060 ORTHO05D005975 3.5e-18 95.5 145 49.7
Manes.13G072000 Manihot esculenta HOM05D005060 ORTHO05D005975 1.3e-17 93.6 142 56.3
ClCG04G005980 Citrullus lanatus HOM05D005060 ORTHO05D005975 3.4e-13 79.0 143 41.3
Atru.chr1.1518 Acer truncatum HOM05D005060 ORTHO05D005975 4.9e-12 75.1 145 52.4
MD07G1060800 Malus domestica HOM05D005060 ORTHO05D005975 4.9e-12 75.1 114 45.6
Potri.016G027600 Populus trichocarpa HOM05D005060 ORTHO05D005975 6.3e-12 74.7 150 40.7
CsaV3_4G029150 Cucumis sativus L. HOM05D005060 ORTHO05D005975 1.1e-11 73.9 150 40.7
QL07p014517 Quercus lobata HOM05D005060 ORTHO05D005975 1.1e-11 73.9 113 46.9
Haze_20302 Corylus avellana HOM05D005060 ORTHO05D005975 1.8e-11 73.2 146 43.2
MELO3C019148.2 Cucumis melo HOM05D005060 ORTHO05D005975 2.4e-11 72.8 150 40.0
TWI53G1989 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 1.6e-10 70.1 139 45.3
Rhsim04G0118500 Rhododendron simsii HOM05D005060 ORTHO05D005975 2.0e-10 69.7 116 40.5
CiPaw.09G163900 Carya illinoinensis HOM05D005060 ORTHO05D005975 2.7e-10 69.3 106 43.4
Ca_08351_v3 Cicer arietinum L. HOM05D005060 ORTHO05D005975 3.5e-10 68.9 135 37.0
Sabra16G0032200 Salix brachista HOM05D005060 ORTHO05D005975 4.5e-10 68.6 150 39.3
Cpa.g.sc33.198 Carica papaya HOM05D005060 ORTHO05D005975 7.8e-10 67.8 149 47.7
Prupe.2G065900 Prunus persica HOM05D005060 ORTHO05D005975 1.7e-09 66.6 137 41.6
Lj1C23T21 Lonicera japonica HOM05D005060 ORTHO05D005975 2.3e-09 66.2 112 47.3
Lj1g0025022 Lotus japonicus HOM05D005060 ORTHO05D005975 2.3e-09 66.2 138 39.1
Medtr7g088520 Medicago truncatula HOM05D005060 ORTHO05D005975 3.8e-09 65.5 148 41.2
CAN.G128.101 Capsicum annuum HOM05D005060 ORTHO05D005975 5.0e-09 65.1 151 41.1
Nitab4.5_0003286g0020 Nicotiana tabacum HOM05D005060 ORTHO05D005975 8.6e-09 64.3 153 37.9
Nn7g37114 Nelumbo nucifera HOM05D005060 ORTHO05D005975 1.1e-08 63.9 145 44.1
Ciclev10013047m.g Citrus clementina HOM05D005060 ORTHO05D005975 1.5e-08 63.5 146 45.2
Sed0011991 Sechium edule HOM05D005060 ORTHO05D005975 1.5e-08 63.5 142 35.9
Atru.chr1.1520 Acer truncatum HOM05D005060 ORTHO05D005975 1.9e-08 63.2 154 42.9
Haze_20306 Corylus avellana HOM05D005060 ORTHO05D005975 2.5e-08 62.8 139 37.4
MD02G1260500 Malus domestica HOM05D005060 ORTHO05D005975 2.5e-08 62.8 114 41.2
Lsat_1_v5_gn_8_109400 Lactuca sativa HOM05D005060 ORTHO05D005975 3.3e-08 62.4 92 39.1
Lalb_Chr24g0400621 Lupinus albus HOM05D005060 ORTHO05D005975 4.3e-08 62.0 145 35.2
RcHm_v2.0_Chr1g0331611 Rosa chinensis HOM05D005060 ORTHO05D005975 5.6e-08 61.6 104 39.4
Cfa019938 Carpinus fangiana HOM05D005060 ORTHO05D005975 7.3e-08 61.2 115 40.0
Nitab4.5_0000062g0300 Nicotiana tabacum HOM05D005060 ORTHO05D005975 7.3e-08 61.2 151 43.0
Psat0s2745g0280 Pisum sativum HOM05D005060 ORTHO05D005975 7.3e-08 61.2 151 33.1
Sopen10g031600 Solanum pennellii HOM05D005060 ORTHO05D005975 7.3e-08 61.2 152 42.1
Eucgr.A02181 Eucalyptus grandis HOM05D005060 ORTHO05D005975 9.5e-08 60.8 148 42.6
VMungo1383G0657 Vigna mungo HOM05D005060 ORTHO05D005975 9.5e-08 60.8 144 34.0
Cpa.g.sc33.199 Carica papaya HOM05D005060 ORTHO05D005975 1.2e-07 60.5 148 41.2
Migut.J01559 Erythranthe guttata HOM05D005060 ORTHO05D005975 1.2e-07 60.5 147 44.9
PGR042G1122 Punica granatum HOM05D005060 ORTHO05D005975 1.6e-07 60.1 90 50.0
Sabra16G0031900 Salix brachista HOM05D005060 ORTHO05D005975 1.6e-07 60.1 108 39.8
unitig_21.g20673 Utricularia gibba HOM05D005060 ORTHO05D005975 1.6e-07 60.1 150 35.3
Solyc10g081100.3 Solanum lycopersicum HOM05D005060 ORTHO05D005975 2.1e-07 59.7 152 41.4
TPR.G27972 Trifolium pratense HOM05D005060 ORTHO05D005975 2.1e-07 59.7 135 34.8
Phvul.001G116500 Phaseolus vulgaris HOM05D005060 ORTHO05D005975 2.8e-07 59.3 145 33.1
PGSC0003DMG400028107 Solanum tuberosum HOM05D005060 ORTHO05D005975 3.6e-07 58.9 152 42.1
GSVIVG01025849001 Vitis vinifera HOM05D005060 ORTHO05D005975 3.6e-07 58.9 107 49.5
Ciclev10013042m.g Citrus clementina HOM05D005060 ORTHO05D005975 4.7e-07 58.5 151 45.7
vmacro08973 Vaccinium macrocarpon HOM05D005060 ORTHO05D005975 4.7e-07 58.5 146 36.3
PSO339G2385 Papaver somniferum HOM05D005060 ORTHO05D005975 6.1e-07 58.2 146 42.5
FAN10G4368 Fragaria x ananassa HOM05D002241 ORTHO05D002458 8.0e-07 57.8 104 40.4
Hma1.2p1_0031F.1_g018400 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 1.0e-06 57.4 86 55.8
Hma1.2p1_2089F.1_g313840 Hydrangea macrophylla HOM05D005060 ORTHO05D005975 1.0e-06 57.4 86 55.8
PSO384G0259 Papaver somniferum HOM05D005060 ORTHO05D005975 1.0e-06 57.4 141 41.8
TWI74G0004 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 1.0e-06 57.4 143 46.2
TWI74G0567 Tripterygium wilfordii HOM05D005060 ORTHO05D005975 1.0e-06 57.4 146 42.5
HanXRQChr05g0130501 Helianthus annuus HOM05D005060 ORTHO05D005975 1.8e-06 56.6 126 38.1
Glyma.19G124900 Glycine max HOM05D005060 ORTHO05D005975 2.3e-06 56.2 135 31.9
Oeu023007.1 Olea europaea HOM05D005060 ORTHO05D005975 2.3e-06 56.2 152 40.8
TAR369G0553 Trochodendron aralioides HOM05D005060 ORTHO05D005975 3.0e-06 55.8 148 43.2
Ah.04g150220 Amaranthus hybridus HOM05D005060 ORTHO05D005975 5.2e-06 55.1 73 47.9
Cc06_g22810 Coffea canephora HOM05D005060 ORTHO05D005975 5.2e-06 55.1 157 39.5
ECA236G1981 Erigeron canadensis HOM05D005060 ORTHO05D005975 5.2e-06 55.1 147 40.8
FAN01G1650 Fragaria x ananassa HOM05D005060 ORTHO05D005975 5.2e-06 55.1 65 49.2
Sc13g0000780 Simmondsia chinensis HOM05D005060 ORTHO05D005975 8.9e-06 54.3 124 41.1


User provided reference genes

Program Settings