Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G026100 Populus trichocarpa HOM05D005510 ORTHO05D006750 2.2e-249 865.1 430 100.0
Sabra06G0019200 Salix brachista HOM05D005510 ORTHO05D006750 1.7e-230 802.4 458 89.1
Ciclev10011846m.g Citrus clementina HOM05D005510 ORTHO05D006750 1.5e-189 666.4 426 77.0
Dinv14542 Davidia involucrata HOM05D005510 ORTHO05D006750 5.3e-187 657.9 394 79.7
Manes.10G072300 Manihot esculenta HOM05D005510 ORTHO05D006750 8.5e-185 650.6 426 74.9
TWI74G1137 Tripterygium wilfordii HOM05D005510 ORTHO05D006750 1.4e-184 649.8 427 74.5
Atru.chr8.924 Acer truncatum HOM05D005510 ORTHO05D006750 1.9e-184 649.4 395 79.5
Prupe.7G023400 Prunus persica HOM05D005510 ORTHO05D006750 1.1e-181 640.2 432 72.2
Actinidia38200 Actinidia chinensis HOM05D005510 ORTHO05D006750 1.8e-179 632.9 428 71.7
QL07p015480 Quercus lobata HOM05D005510 ORTHO05D006750 2.0e-178 629.4 406 73.4
GSVIVG01025858001 Vitis vinifera HOM05D005510 ORTHO05D006750 2.6e-178 629.0 407 75.2
Medtr6g026730 Medicago truncatula HOM05D005510 ORTHO05D006750 1.3e-177 626.7 390 75.4
Cfa019896 Carpinus fangiana HOM05D005510 ORTHO05D006750 1.4e-176 623.2 432 70.6
MD14G1100100 Malus domestica HOM05D005510 ORTHO05D006750 1.9e-176 622.9 428 72.2
Ca_04447_v3 Cicer arietinum L. HOM05D002043 ORTHO05D002207 3.2e-176 622.1 393 75.1
Cpa.g.sc33.180 Carica papaya HOM05D005510 ORTHO05D006750 5.5e-176 621.3 431 70.5
CSS0010239 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 6.1e-175 617.8 395 74.7
Lj5g0015267 Lotus japonicus HOM05D005510 ORTHO05D006750 1.8e-174 616.3 395 74.2
Hma1.2p1_1327F.1_g275890 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 2.3e-174 615.9 414 71.3
Psat1g087480 Pisum sativum HOM05D005510 ORTHO05D006750 2.3e-174 615.9 438 69.2
Rhsim13G0197800 Rhododendron simsii HOM05D005510 ORTHO05D006750 3.9e-174 615.1 406 73.2
Eucgr.A02173 Eucalyptus grandis HOM05D005510 ORTHO05D006750 6.7e-174 614.4 391 74.9
Nn7g37230 Nelumbo nucifera HOM05D005510 ORTHO05D006750 6.7e-174 614.4 418 70.3
MBI13_g44207_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 8.8e-174 614.0 427 69.6
Glyma.05G079900 Glycine max HOM05D005510 ORTHO05D006750 1.5e-173 613.2 425 70.6
RcHm_v2.0_Chr3g0495031 Rosa chinensis HOM05D005510 ORTHO05D006750 7.4e-173 610.9 425 69.9
Aqoxy3G03066 Aquilegia oxysepala HOM05D005510 ORTHO05D006750 6.3e-172 607.8 424 70.0
Cc06_g18550 Coffea canephora HOM05D005510 ORTHO05D006750 1.1e-171 607.1 431 68.9
Lalb_Chr02g0157631 Lupinus albus HOM05D005510 ORTHO05D006750 1.1e-171 607.1 414 71.0
PGR042G2248 Punica granatum HOM05D005510 ORTHO05D006750 2.0e-170 602.8 392 72.4
FvH4_1g29380 Fragaria vesca HOM05D005510 ORTHO05D006750 1.3e-169 600.1 394 73.9
CsaV3_4G029010 Cucumis sativus L. HOM05D005510 ORTHO05D006750 5.0e-169 598.2 424 69.6
Phvul.004G053400 Phaseolus vulgaris HOM05D005510 ORTHO05D006750 8.5e-169 597.4 410 70.2
PSO384G1661 Papaver somniferum HOM05D005510 ORTHO05D006750 1.5e-168 596.7 422 70.6
FAN26G2114 Fragaria x ananassa HOM05D005510 ORTHO05D006750 1.9e-168 596.3 394 73.1
Duzib093G0795 Durio zibethinus HOM05D005510 ORTHO05D006750 5.5e-168 594.7 402 72.1
Gohir.A01G189700 Gossypium hirsutum HOM05D005510 ORTHO05D006750 9.4e-168 594.0 397 72.3
Oeu008195.1 Olea europaea HOM05D005510 ORTHO05D006750 1.2e-167 593.6 416 70.0
CANSAT11G0391 Cannabis sativa HOM05D005510 ORTHO05D006750 1.6e-167 593.2 391 71.9
Hund24472 Selenicereus undatus HOM05D005510 ORTHO05D006750 1.6e-167 593.2 434 67.5
Gorai.002G222700 Gossypium raimondii HOM05D005510 ORTHO05D006750 2.1e-167 592.8 397 72.3
Gohir.D01G179900 Gossypium hirsutum HOM05D005510 ORTHO05D006750 4.7e-167 591.7 397 72.0
Lj1C1070G2 Lonicera japonica HOM05D005510 ORTHO05D006750 4.7e-167 591.7 424 67.9
TAR623G1399 Trochodendron aralioides HOM05D005510 ORTHO05D006750 8.0e-167 590.9 418 70.3
PSO339G1815 Papaver somniferum HOM05D005510 ORTHO05D006750 1.0e-166 590.5 422 69.9
MELO3C019166.2 Cucumis melo HOM05D005510 ORTHO05D006750 1.8e-166 589.7 424 68.4
Sopen10g030080 Solanum pennellii HOM05D005510 ORTHO05D006750 2.6e-165 585.9 411 68.9
PGSC0003DMG400008133 Solanum tuberosum HOM05D005510 ORTHO05D006750 3.3e-165 585.5 430 67.4
ATR1096G068 Amborella trichopoda HOM05D005510 ORTHO05D006750 7.5e-165 584.3 394 69.5
SGA_v2.0_scaffold69G23139 Striga asiatica HOM05D005510 ORTHO05D006750 9.7e-165 583.9 403 71.0
THA.LOC104803249 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 9.7e-165 583.9 397 69.8
SalBow6G2337 Salvia bowleyana HOM05D005510 ORTHO05D006750 1.7e-164 583.2 394 70.1
SalBow6G2820 Salvia bowleyana HOM05D005510 ORTHO05D006750 6.3e-164 581.3 394 69.8
Carub.0005s2357 Capsella rubella HOM05D005510 ORTHO05D006750 1.1e-163 580.5 397 70.3
arahy.Tifrunner.gnm1.ann1.RHHN50 Arachis hypogaea HOM05D005510 ORTHO05D006750 4.1e-163 578.6 448 64.7
DCAR_020612 Daucus carota HOM05D005510 ORTHO05D006750 4.1e-163 578.6 405 68.6
Migut.J01685 Erythranthe guttata HOM05D005510 ORTHO05D006750 4.1e-163 578.6 409 69.7
arahy.Tifrunner.gnm1.ann1.VC24PE Arachis hypogaea HOM05D005510 ORTHO05D006750 5.3e-163 578.2 454 65.2
CDE08G0225 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 2.7e-162 575.9 427 65.8
Solyc10g079440.2 Solanum lycopersicum HOM05D005510 ORTHO05D006750 2.7e-162 575.9 431 65.7
AL5G38220 Arabidopsis lyrata HOM05D005510 ORTHO05D006750 2.2e-161 572.8 397 69.3
BcaC07g40115 Brassica carinata HOM05D005510 ORTHO05D006750 3.8e-161 572.0 396 70.2
Aa31LG10G11690 Aethionema arabicum HOM05D005510 ORTHO05D006750 1.1e-160 570.5 396 69.4
HPP92_018208 Vanilla planifolia HOM05D005510 ORTHO05D006750 3.2e-160 568.9 392 68.4
BolC8t50825H Brassica oleracea HOM05D005510 ORTHO05D006750 4.2e-160 568.5 395 69.6
COL.COLO4_37568 Corchorus olitorius HOM05D005510 ORTHO05D006750 4.2e-160 568.5 429 64.6
AT3G56840 Arabidopsis thaliana HOM05D005510 ORTHO05D006750 2.1e-159 566.2 397 68.5
A09p49660 Brassica napus HOM05D005510 ORTHO05D006750 2.1e-159 566.2 419 66.6
BraA09t40419Z Brassica rapa HOM05D005510 ORTHO05D006750 2.1e-159 566.2 419 66.6
Peaxi162Scf00002g00419 Petunia axillaris HOM05D005510 ORTHO05D006750 2.7e-159 565.8 432 64.8
Lsat_1_v5_gn_5_40140 Lactuca sativa HOM05D005510 ORTHO05D006750 3.6e-159 565.5 392 68.1
AUR62020963 Chenopodium quinoa HOM05D005510 ORTHO05D006750 4.7e-159 565.1 426 65.5
Thhalv10005964m.g Eutrema salsugineum HOM05D005510 ORTHO05D006750 2.3e-158 562.8 443 63.9
HanXRQChr02g0047171 Helianthus annuus HOM05D005510 ORTHO05D006750 2.3e-158 562.8 389 67.9
EL10Ac3g07380 Beta vulgaris HOM05D005510 ORTHO05D006750 1.7e-156 556.6 426 64.8
Sp5g05750 Schrenkiella parvula HOM05D005510 ORTHO05D006750 3.7e-156 555.4 426 64.3
EL10Ac3g07382 Beta vulgaris HOM05D005510 ORTHO05D006750 2.4e-155 552.7 464 60.6
Haze_20353 Corylus avellana HOM05D005510 ORTHO05D006750 5.9e-154 548.1 383 70.0
Os01g0809900 Oryza sativa ssp. japonica HOM05D005510 ORTHO05D006750 5.9e-154 548.1 395 67.3
Sc13g0000690 Simmondsia chinensis HOM05D005510 ORTHO05D006750 1.2e-151 540.4 398 67.1
Nitab4.5_0000646g0280 Nicotiana tabacum HOM05D005510 ORTHO05D006750 2.8e-151 539.3 444 63.3
BcaC07g39994 Brassica carinata HOM05D005510 ORTHO05D006750 1.3e-148 530.4 395 66.3
unitig_749.g14152 Utricularia gibba HOM05D005510 ORTHO05D006750 2.8e-148 529.3 429 62.2
VMungo0464G0325 Vigna mungo HOM05D005510 ORTHO05D006750 1.7e-145 520.0 448 58.9
arahy.Tifrunner.gnm1.ann1.T4STFC Arachis hypogaea HOM05D005510 ORTHO05D006750 2.5e-144 516.2 394 65.2
CSS0036939 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 1.5e-141 506.9 328 72.6
ClCG04G005050 Citrullus lanatus HOM05D005510 ORTHO05D006750 1.5e-136 490.3 354 67.2
CAN.G641.38 Capsicum annuum HOM05D005510 ORTHO05D006750 3.7e-132 475.7 332 68.4
Hma1.2p1_1327F.1_g275900 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 7.0e-131 471.5 328 70.1
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 7.8e-130 468.0 392 60.7
AUR62018456 Chenopodium quinoa HOM05D005510 ORTHO05D006750 2.3e-129 466.5 329 65.7
Thecc.05G124100 Theobroma cacao HOM05D005510 ORTHO05D006750 2.5e-128 463.0 328 69.5
Sed0017548 Sechium edule HOM05D005510 ORTHO05D006750 8.3e-124 448.0 302 70.2
CiPaw.09G161300 Carya illinoinensis HOM05D005510 ORTHO05D006750 6.0e-122 441.8 282 73.4
Nitab4.5_0002805g0080 Nicotiana tabacum HOM05D005510 ORTHO05D006750 7.3e-120 434.9 352 64.8
Pp3c12_4730 Physcomitrium patens HOM05D005510 ORTHO05D006750 9.5e-120 434.5 397 53.7
AagrBONN_evm.TU.Sc2ySwM_344.4799 Anthoceros agrestis HOM05D005510 ORTHO05D000746 6.4e-116 421.8 387 54.0
C08p32070 Brassica napus HOM05D005510 ORTHO05D006750 1.9e-112 410.2 330 62.7
MBI13_g43864_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 2.1e-111 406.8 347 59.9
Zm00001eb150290 Zea mays HOM05D005510 ORTHO05D006750 5.3e-110 402.1 289 66.4
BraA09t40424Z Brassica rapa HOM05D005510 ORTHO05D006750 4.4e-109 399.1 287 67.2
A09p49680 Brassica napus HOM05D005510 ORTHO05D006750 5.8e-109 398.7 287 67.2
Mapoly0011s0121 Marchantia polymorpha HOM05D005510 ORTHO05D006750 1.4e-107 394.0 358 53.6
SMO116G0325 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 1.7e-105 387.1 409 50.1
arahy.Tifrunner.gnm1.ann1.MR8QPJ Arachis hypogaea HOM05D005510 ORTHO05D006750 4.5e-101 372.5 397 52.6
TPR.G23234 Trifolium pratense HOM05D005510 ORTHO05D006750 1.5e-96 357.5 213 76.5
THA.LOC104803303 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 1.8e-94 350.5 241 66.8
CSS0041188 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 1.0e-92 344.7 241 69.3
CARHR166990 Cardamine hirsuta HOM05D005510 ORTHO05D006750 2.9e-92 343.2 237 67.9
Cre13.g574150 Chlamydomonas reinhardtii HOM05D005510 ORTHO05D006750 2.3e-81 307.0 472 40.9
THA.LOC104803301 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 2.8e-79 300.1 190 71.1
CAN.G248.49 Capsicum annuum HOM05D005510 ORTHO05D006750 4.1e-78 296.2 352 47.2
Manes.07G109500 Manihot esculenta HOM05D005510 ORTHO05D006750 2.9e-60 236.9 170 71.2
MSTRG.19825 Avicennia marina HOM05D005510 ORTHO05D006750 7.2e-59 232.3 179 68.2
TPR.G942 Trifolium pratense HOM05D005510 ORTHO05D006750 8.8e-57 225.3 148 75.0
Manes.05G099066 Manihot esculenta HOM05D005510 ORTHO05D006750 5.7e-56 222.6 184 65.2
Zm00001eb093570 Zea mays HOM05D005510 ORTHO05D006750 9.1e-54 215.3 249 46.6
Cfa027308 Carpinus fangiana HOM05D005510 ORTHO05D006750 1.7e-52 211.1 403 36.5
SEGI_04748 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 3.2e-51 206.8 158 65.8
PGSC0003DMG400012053 Solanum tuberosum HOM05D005510 ORTHO05D006750 1.2e-50 204.9 145 65.5
SalBow7G3561 Salvia bowleyana HOM05D005510 ORTHO05D006750 1.0e-36 158.7 120 65.8
CBR_g4412 Chara braunii HOM05D005510 ORTHO05D006750 2.8e-34 150.6 457 27.6
AagrBONN_evm.TU.Sc2ySwM_344.567 Anthoceros agrestis HOM05D005510 ORTHO05D006750 2.3e-33 147.5 421 29.7
SMO356G0394 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 7.5e-32 142.5 416 28.4
Mapoly0085s0100 Marchantia polymorpha HOM05D005510 ORTHO05D006750 6.3e-31 139.4 426 28.2
Zm00001eb341880 Zea mays HOM05D005510 ORTHO05D006750 2.0e-29 134.4 113 56.6
Pp3c25_9310 Physcomitrium patens HOM05D005510 ORTHO05D006750 4.6e-29 133.3 416 27.4
CAN.G524.4 Capsicum annuum HOM05D005510 ORTHO05D006750 7.8e-29 132.5 91 65.9
CAN.G636.4 Capsicum annuum HOM05D005510 ORTHO05D006750 1.9e-27 127.9 235 37.0
SEGI_32136 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 1.2e-26 125.2 81 71.6
MD14G1091800 Malus domestica HOM05D005510 ORTHO05D006750 2.8e-26 124.0 73 75.3
AUR62018455 Chenopodium quinoa HOM05D005510 ORTHO05D006750 1.2e-21 108.6 98 64.3
MD14G1091600 Malus domestica HOM05D005510 ORTHO05D006750 1.3e-20 105.1 98 63.3
PRCOL_00000521 Prasinoderma coloniale HOM05D005510 ORTHO05D006750 3.0e-20 104.0 276 30.8
CAN.G641.39 Capsicum annuum HOM05D005510 ORTHO05D006750 1.9e-19 101.3 93 59.1
CAN.G524.9 Capsicum annuum HOM05D005510 ORTHO05D020273 9.2e-14 82.4 53 66.0
CDE09G0372 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 9.2e-14 82.4 91 49.5
MD14G1091700 Malus domestica HOM05D005510 ORTHO05D006750 1.3e-07 62.0 37 81.1


User provided reference genes

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