Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 5.6e-144 514.2 256 100.0
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 1.0e-116 423.7 257 84.4
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 4.9e-79 298.5 260 59.6
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 6.4e-79 298.1 248 63.7
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 1.4e-78 297.0 257 63.0
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 1.6e-77 293.5 202 72.3
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 3.9e-76 288.9 246 63.8
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 6.6e-76 288.1 238 62.2
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 1.1e-75 287.3 257 58.8
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.9e-75 286.6 252 62.3
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 3.3e-75 285.8 202 67.8
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 4.3e-75 285.4 199 68.8
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 4.0e-73 278.9 196 69.4
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 5.2e-73 278.5 236 62.7
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 5.2e-73 278.5 253 56.9
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 1.2e-72 277.3 254 60.2
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 1.5e-72 276.9 209 66.0
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 4.4e-72 275.4 198 68.2
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 4.4e-72 275.4 198 67.7
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 4.4e-72 275.4 198 69.7
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 5.8e-72 275.0 240 60.4
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 5.8e-72 275.0 198 67.7
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 7.5e-72 274.6 252 57.9
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 9.8e-72 274.2 249 60.2
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 2.2e-71 273.1 245 59.6
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 8.3e-71 271.2 248 58.5
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 1.4e-70 270.4 189 67.2
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 1.9e-70 270.0 203 67.0
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 1.9e-70 270.0 247 57.1
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 7.0e-70 268.1 197 65.5
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 2.1e-69 266.5 243 58.8
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 2.1e-69 266.5 223 61.0
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 2.7e-69 266.2 246 57.3
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 3.5e-69 265.8 193 65.3
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 4.6e-69 265.4 194 67.0
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 6.0e-69 265.0 262 55.3
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 7.8e-69 264.6 261 53.6
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 7.8e-69 264.6 253 56.1
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 1.0e-68 264.2 255 55.3
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 1.3e-68 263.8 199 63.8
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 3.0e-68 262.7 251 55.0
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 1.9e-67 260.0 261 53.6
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 4.3e-67 258.8 263 54.4
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 1.6e-66 256.9 261 53.3
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 1.6e-66 256.9 230 57.0
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 2.8e-66 256.1 199 62.8
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 8.1e-66 254.6 250 55.6
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 1.4e-65 253.8 187 63.1
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 2.3e-65 253.1 271 50.9
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 3.1e-65 252.7 234 54.7
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 3.1e-65 252.7 198 61.1
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 4.0e-65 252.3 175 67.4
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 5.2e-65 251.9 229 57.6
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 6.8e-65 251.5 198 60.6
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 8.9e-65 251.1 204 60.3
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 1.5e-64 250.4 263 51.0
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 2.6e-64 249.6 251 53.4
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 4.4e-64 248.8 242 51.2
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 5.8e-64 248.4 201 61.7
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 1.7e-63 246.9 244 54.1
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 8.3e-63 244.6 246 50.4
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 1.1e-62 244.2 210 57.6
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 1.4e-62 243.8 202 56.9
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 3.2e-62 242.7 247 51.8
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 3.2e-62 242.7 243 53.1
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 1.2e-61 240.7 262 47.7
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 3.5e-61 239.2 186 58.6
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 4.6e-61 238.8 251 50.6
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 6.0e-61 238.4 230 53.0
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 1.0e-60 237.7 187 60.4
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 1.3e-60 237.3 240 50.4
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 2.3e-60 236.5 249 51.8
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 3.9e-60 235.7 222 54.5
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 2.5e-59 233.0 197 55.3
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 7.3e-59 231.5 262 51.1
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 2.1e-58 229.9 252 48.8
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 3.6e-58 229.2 195 62.1
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 1.4e-54 217.2 187 58.3
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 5.1e-52 208.8 129 78.3
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 6.6e-52 208.4 200 55.5
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 1.9e-51 206.8 196 53.6
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 2.1e-50 203.4 178 58.4
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 3.8e-47 192.6 256 41.4
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 2.4e-46 189.9 197 50.8
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 1.3e-44 184.1 344 34.6
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 1.7e-44 183.7 171 49.1
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 4.8e-42 175.6 128 68.8
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 2.6e-40 169.9 182 46.2
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 1.2e-37 161.0 129 60.5
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 1.5e-32 144.1 118 56.8
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 4.2e-30 136.0 119 55.5
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 9.6e-27 124.8 119 53.8
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 1.3e-26 124.4 230 39.6
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 6.7e-20 102.1 136 47.8
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 1.4e-17 94.4 135 48.9
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 3.4e-16 89.7 85 56.5
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 3.8e-15 86.3 66 63.6
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 1.4e-14 84.3 69 58.0
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 7.9e-13 78.6 56 69.6


User provided reference genes

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