Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G023801 Populus trichocarpa HOM05D006366 ORTHO05D008467 1.5e-42 175.6 81 100.0
Potri.016G022700 Populus trichocarpa HOM05D006366 ORTHO05D008467 4.9e-33 144.1 81 81.5
Sabra16G0023400 Salix brachista HOM05D006366 ORTHO05D008467 8.3e-33 143.3 81 80.2
Sabra16G0028900 Salix brachista HOM05D006366 ORTHO05D008467 8.3e-33 143.3 81 80.2
Manes.09G000100 Manihot esculenta HOM05D006366 ORTHO05D008467 2.4e-32 141.7 81 80.2
TWI60G0958 Tripterygium wilfordii HOM05D006366 ORTHO05D008467 7.0e-32 140.2 81 77.8
COL.COLO4_29916 Corchorus olitorius HOM05D006366 ORTHO05D008467 3.5e-31 137.9 81 79.0
Atru.chr8.945 Acer truncatum HOM05D006366 ORTHO05D008467 1.0e-30 136.3 81 76.5
MELO3C026394.2 Cucumis melo HOM05D006366 ORTHO05D008467 1.7e-30 135.6 81 75.3
Eucgr.K01331 Eucalyptus grandis HOM05D006366 ORTHO05D008467 2.9e-30 134.8 81 75.3
Thecc.01G164300 Theobroma cacao HOM05D006366 ORTHO05D008467 2.9e-30 134.8 81 76.5
Gohir.A12G087400 Gossypium hirsutum HOM05D006366 ORTHO05D008467 3.8e-30 134.4 81 75.3
Gohir.D12G085600 Gossypium hirsutum HOM05D006366 ORTHO05D008467 3.8e-30 134.4 81 75.3
Gorai.008G096000 Gossypium raimondii HOM05D006366 ORTHO05D008467 3.8e-30 134.4 81 75.3
ClCG11G016700 Citrullus lanatus HOM05D006366 ORTHO05D008467 5.0e-30 134.0 81 74.1
Nitab4.5_0006644g0050 Nicotiana tabacum HOM05D006366 ORTHO05D008467 5.0e-30 134.0 81 74.1
Nitab4.5_0006724g0060 Nicotiana tabacum HOM05D001798 ORTHO05D008467 5.0e-30 134.0 81 74.1
CsaV3_4G032210 Cucumis sativus L. HOM05D006366 ORTHO05D008467 6.6e-30 133.7 81 74.1
Prupe.3G191400 Prunus persica HOM05D006366 ORTHO05D008467 6.6e-30 133.7 81 76.5
Nn3g18048 Nelumbo nucifera HOM05D006366 ORTHO05D008467 1.1e-29 132.9 81 74.1
Duzib147G0458 Durio zibethinus HOM05D006366 ORTHO05D008467 1.5e-29 132.5 81 74.1
Ciclev10009311m.g Citrus clementina HOM05D006366 ORTHO05D008467 1.9e-29 132.1 81 75.3
Dinv26512 Davidia involucrata HOM05D006366 ORTHO05D008467 2.5e-29 131.7 78 75.6
Cfa017853 Carpinus fangiana HOM05D006366 ORTHO05D008467 4.3e-29 131.0 81 76.5
PGR004G2515 Punica granatum HOM05D006366 ORTHO05D008467 7.3e-29 130.2 81 71.6
Sed0019883 Sechium edule HOM05D006366 ORTHO05D008467 7.3e-29 130.2 81 72.8
PGSC0003DMG400000936 Solanum tuberosum HOM05D006366 ORTHO05D008467 7.3e-29 130.2 81 72.8
CiPaw.15G093200 Carya illinoinensis HOM05D006366 ORTHO05D008467 9.5e-29 129.8 81 75.3
Cc05_g00620 Coffea canephora HOM05D006366 ORTHO05D008467 1.6e-28 129.0 81 71.6
Peaxi162Scf00351g00618 Petunia axillaris HOM05D006366 ORTHO05D008467 1.6e-28 129.0 81 71.6
RcHm_v2.0_Chr2g0154731 Rosa chinensis HOM05D006366 ORTHO05D008467 1.6e-28 129.0 81 72.8
Solyc07g044830.3 Solanum lycopersicum HOM05D006366 ORTHO05D008467 2.1e-28 128.6 81 71.6
SalBow7G2372 Salvia bowleyana HOM05D006366 ORTHO05D008467 2.8e-28 128.3 81 70.4
CAN.G946.5 Capsicum annuum HOM05D006366 ORTHO05D008467 4.7e-28 127.5 81 71.6
Sopen07g023380 Solanum pennellii HOM05D006366 ORTHO05D008467 4.7e-28 127.5 81 71.6
Rhsim11G0024700 Rhododendron simsii HOM05D006366 ORTHO05D008467 8.0e-28 126.7 81 67.9
MD09G1135300 Malus domestica HOM05D006366 ORTHO05D008467 1.0e-27 126.3 81 67.9
EL10Ac9g22887 Beta vulgaris HOM05D006366 ORTHO05D008467 1.8e-27 125.6 81 67.9
Migut.C00287 Erythranthe guttata HOM05D006366 ORTHO05D008467 1.8e-27 125.6 81 67.9
GSVIVG01012987001 Vitis vinifera HOM05D006366 ORTHO05D008467 1.8e-27 125.6 81 69.1
Glyma.13G004000 Glycine max HOM05D006366 ORTHO05D008467 2.3e-27 125.2 81 70.4
Glyma.20G065200 Glycine max HOM05D006366 ORTHO05D008467 2.3e-27 125.2 81 70.4
Aqoxy1G01337 Aquilegia oxysepala HOM05D006366 ORTHO05D008467 4.0e-27 124.4 81 66.7
Cpa.g.sc8.298 Carica papaya HOM05D006366 ORTHO05D008467 4.0e-27 124.4 81 70.4
Phvul.006G002200 Phaseolus vulgaris HOM05D006366 ORTHO05D008467 4.0e-27 124.4 81 69.1
CANSAT64G1607 Cannabis sativa HOM05D006366 ORTHO05D008467 5.2e-27 124.0 81 67.9
Hma1.2p1_0451F.1_g155730 Hydrangea macrophylla HOM05D006366 ORTHO05D008467 5.2e-27 124.0 81 70.4
THA.LOC104803019 Tarenaya hassleriana HOM05D006366 ORTHO05D008467 5.2e-27 124.0 81 70.4
Actinidia01262 Actinidia chinensis HOM05D006366 ORTHO05D008467 6.8e-27 123.6 81 66.7
arahy.Tifrunner.gnm1.ann1.Q8HZUY Arachis hypogaea HOM05D006366 ORTHO05D008467 6.8e-27 123.6 81 69.1
arahy.Tifrunner.gnm1.ann1.ZW16GX Arachis hypogaea HOM05D006366 ORTHO05D008467 6.8e-27 123.6 81 69.1
FAN14G5422 Fragaria x ananassa HOM05D006366 ORTHO05D008467 8.9e-27 123.2 81 71.6
AUR62015180 Chenopodium quinoa HOM05D006366 ORTHO05D008467 1.2e-26 122.9 81 66.7
Medtr3g081290 Medicago truncatula HOM05D006366 ORTHO05D008467 1.2e-26 122.9 81 67.9
vmacro00060 Vaccinium macrocarpon HOM05D006366 ORTHO05D008467 1.2e-26 122.9 81 66.7
Aa31LG9G2360 Aethionema arabicum HOM05D006366 ORTHO05D008467 1.5e-26 122.5 81 66.7
CSS0005885 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 1.5e-26 122.5 81 64.2
CSS0048073 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 1.5e-26 122.5 81 64.2
Hund24327 Selenicereus undatus HOM05D006366 ORTHO05D008467 1.5e-26 122.5 80 65.0
Actinidia32776 Actinidia chinensis HOM05D006366 ORTHO05D008467 2.0e-26 122.1 81 65.4
MSTRG.24998 Avicennia marina HOM05D006366 ORTHO05D008467 2.6e-26 121.7 80 66.2
FAN05G0502 Fragaria x ananassa HOM05D006366 ORTHO05D008467 2.6e-26 121.7 81 70.4
FAN09G0641 Fragaria x ananassa HOM05D006366 ORTHO05D008467 2.6e-26 121.7 81 70.4
Peaxi162Scf01158g00018 Petunia axillaris HOM05D006366 ORTHO05D008467 2.6e-26 121.7 81 67.9
CSS0012855 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 3.4e-26 121.3 81 64.2
CSS0020773 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 3.4e-26 121.3 81 64.2
AT4G14965 Arabidopsis thaliana HOM05D006366 ORTHO05D008467 4.4e-26 120.9 81 67.9
AUR62017635 Chenopodium quinoa HOM05D006366 ORTHO05D008467 4.4e-26 120.9 81 65.4
Lj6g0003976 Lotus japonicus HOM05D006366 ORTHO05D008467 4.4e-26 120.9 81 65.4
Sc06g0005840 Simmondsia chinensis HOM05D006366 ORTHO05D008467 4.4e-26 120.9 81 64.2
Carub.0007s2713 Capsella rubella HOM05D006366 ORTHO05D008467 5.7e-26 120.6 81 69.1
MBI07_g10945_MAGBIO Magnolia biondii HOM05D006366 ORTHO05D008467 5.7e-26 120.6 81 65.4
Thhalv10026107m.g Eutrema salsugineum HOM05D006366 ORTHO05D008467 9.8e-26 119.8 81 66.7
Lalb_Chr22g0360801 Lupinus albus HOM05D006366 ORTHO05D008467 1.3e-25 119.4 80 65.0
TAR624G0611 Trochodendron aralioides HOM05D006366 ORTHO05D008467 1.3e-25 119.4 81 65.4
AL7G40860 Arabidopsis lyrata HOM05D006366 ORTHO05D008467 1.7e-25 119.0 81 67.9
Ca_16310_v3 Cicer arietinum L. HOM05D006366 ORTHO05D008467 2.2e-25 118.6 80 66.2
HanXRQChr17g0540961 Helianthus annuus HOM05D006366 ORTHO05D008467 2.2e-25 118.6 81 65.4
SGA_v2.0_scaffold26G11309 Striga asiatica HOM05D006366 ORTHO05D008467 2.2e-25 118.6 81 63.0
Psat5g107960 Pisum sativum HOM05D006366 ORTHO05D008467 2.9e-25 118.2 81 64.2
ATR0737G147 Amborella trichopoda HOM05D006366 ORTHO05D008467 3.7e-25 117.9 81 64.2
DCAR_009833 Daucus carota HOM05D006366 ORTHO05D008467 6.4e-25 117.1 81 66.7
Sp7g13140 Schrenkiella parvula HOM05D006366 ORTHO05D008467 6.4e-25 117.1 81 66.7
A05p16880 Brassica napus HOM05D006366 ORTHO05D008467 8.3e-25 116.7 81 65.4
C06p16670 Brassica napus HOM05D006366 ORTHO05D008467 8.3e-25 116.7 81 65.4
BolC6t36868H Brassica oleracea HOM05D006366 ORTHO05D008467 8.3e-25 116.7 81 65.4
BraA05t20592Z Brassica rapa HOM05D006366 ORTHO05D008467 8.3e-25 116.7 81 65.4
CARHR221600 Cardamine hirsuta HOM05D006366 ORTHO05D008467 1.1e-24 116.3 81 64.2
PSO541G2638 Papaver somniferum HOM05D006366 ORTHO05D008467 1.1e-24 116.3 80 62.5
HPP92_021470 Vanilla planifolia HOM05D006366 ORTHO05D008467 1.4e-24 115.9 80 61.2
BcaB02g07847 Brassica carinata HOM05D006366 ORTHO05D008467 2.4e-24 115.2 81 64.2
PSO675G0146 Papaver somniferum HOM05D006366 ORTHO05D008467 2.4e-24 115.2 80 62.5
Lsat_1_v5_gn_3_36241 Lactuca sativa HOM05D006366 ORTHO05D008467 9.2e-24 113.2 76 65.8
Os03g0205500 Oryza sativa ssp. japonica HOM05D006366 ORTHO05D008467 2.7e-23 111.7 80 58.8
SHI11338 Sapria himalayana HOM05D006366 ORTHO05D008467 4.6e-23 110.9 74 64.9
Zm00001eb400650 Zea mays HOM05D006366 ORTHO05D008467 4.6e-23 110.9 80 57.5
SEGI_23922 Sequoiadendron giganteum HOM05D006366 ORTHO05D008467 2.3e-22 108.6 81 60.5
VMungo0540G1919 Vigna mungo HOM05D006366 ORTHO05D008467 2.5e-21 105.1 66 72.7
BcaC08g44258 Brassica carinata HOM05D006366 ORTHO05D008467 4.3e-21 104.4 74 64.9
Oeu011642.1 Olea europaea HOM05D006366 ORTHO05D008467 6.2e-20 100.5 61 73.8
ECA246G1127 Erigeron canadensis HOM05D006366 ORTHO05D008467 3.4e-18 94.7 63 68.3
TPR.G31172 Trifolium pratense HOM05D006366 ORTHO05D008467 4.4e-18 94.4 57 75.4
Haze_18340 Corylus avellana HOM05D006366 ORTHO05D008467 5.8e-18 94.0 57 73.7
Lj3A1010G53 Lonicera japonica HOM05D006366 ORTHO05D008467 4.9e-17 90.9 95 51.6
SMO367G0820 Selaginella moellendorffii HOM05D006366 ORTHO05D008467 1.1e-16 89.7 79 45.6
Pp3c21_2980 Physcomitrium patens HOM05D006366 ORTHO05D008467 7.3e-13 77.0 83 44.6
Mapoly0115s0059 Marchantia polymorpha HOM05D006366 ORTHO05D008467 1.2e-12 76.3 80 38.8
unitig_0.g1057 Utricularia gibba HOM05D001088 ORTHO05D002099 2.6e-10 68.6 45 64.4
Pp3c18_20590 Physcomitrium patens HOM05D006366 ORTHO05D008467 1.7e-09 65.9 81 34.6
CBR_g19221 Chara braunii HOM05D006366 ORTHO05D008467 8.3e-09 63.5 79 38.0


User provided reference genes

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