Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G021100 Populus trichocarpa HOM05D007805 ORTHO05D009877 1.4e-25 119.0 68 100.0
Sabra06G0014500 Salix brachista HOM05D007805 ORTHO05D009877 1.5e-22 109.0 68 92.6
Duzib138G1109 Durio zibethinus HOM05D007805 ORTHO05D009877 2.8e-18 94.7 68 80.9
TWI34G1833 Tripterygium wilfordii HOM05D007805 ORTHO05D009877 8.3e-18 93.2 69 76.8
Dinv24693 Davidia involucrata HOM05D007805 ORTHO05D009877 1.4e-17 92.4 68 77.9
Duzib133G0571 Durio zibethinus HOM05D007805 ORTHO05D009877 4.1e-17 90.9 70 75.7
Manes.08G069000 Manihot esculenta HOM05D007805 ORTHO05D009877 7.0e-17 90.1 67 76.1
Gohir.A11G156100 Gossypium hirsutum HOM05D007805 ORTHO05D009877 9.1e-17 89.7 70 77.1
CSS0028935 Camellia sinensis var. sinensis HOM05D007805 ORTHO05D009877 1.2e-16 89.4 67 71.6
CSS0006336 Camellia sinensis var. sinensis HOM05D007805 ORTHO05D009877 1.6e-16 89.0 67 71.6
Gohir.D11G163200 Gossypium hirsutum HOM05D007805 ORTHO05D009877 1.6e-16 89.0 70 75.7
Gorai.007G173900 Gossypium raimondii HOM05D007805 ORTHO05D009877 1.6e-16 89.0 70 75.7
Thecc.01G172700 Theobroma cacao HOM05D007805 ORTHO05D009877 2.0e-16 88.6 70 72.9
Cc05_g00040 Coffea canephora HOM05D007805 ORTHO05D009877 2.7e-16 88.2 67 76.1
TAR624G1043 Trochodendron aralioides HOM05D007805 ORTHO05D009877 3.5e-16 87.8 67 73.1
COL.COLO4_33759 Corchorus olitorius HOM05D007805 ORTHO05D009877 1.0e-15 86.3 68 70.6
Oeu003099.1 Olea europaea HOM05D007805 ORTHO05D009877 1.3e-15 85.9 71 70.4
CSS0012461 Camellia sinensis var. sinensis HOM05D007805 ORTHO05D009877 1.7e-15 85.5 67 70.1
ClCG07G010920 Citrullus lanatus HOM05D007805 ORTHO05D009877 1.7e-15 85.5 70 70.0
Ciclev10013268m.g Citrus clementina HOM05D007805 ORTHO05D009877 1.7e-15 85.5 72 70.8
Haze_13640 Corylus avellana HOM05D007805 ORTHO05D009877 1.7e-15 85.5 68 72.1
Cpa.g.sc8.292 Carica papaya HOM05D007805 ORTHO05D009877 2.2e-15 85.1 69 68.1
MBI02_g35828_MAGBIO Magnolia biondii HOM05D007805 ORTHO05D009877 2.2e-15 85.1 66 75.8
SalBow7G2318 Salvia bowleyana HOM05D007805 ORTHO05D009877 2.2e-15 85.1 72 70.8
Atru.chr8.992 Acer truncatum HOM05D007805 ORTHO05D009877 2.9e-15 84.7 68 67.6
MSTRG.6601 Avicennia marina HOM05D007805 ORTHO05D009877 2.9e-15 84.7 72 68.1
MELO3C016236.2 Cucumis melo HOM05D007805 ORTHO05D009877 3.8e-15 84.3 70 70.0
Cfa023524 Carpinus fangiana HOM05D007805 ORTHO05D009877 5.0e-15 84.0 68 70.6
Migut.M00097 Erythranthe guttata HOM05D007805 ORTHO05D009877 6.5e-15 83.6 62 75.8
Sed0026541 Sechium edule HOM05D007805 ORTHO05D009877 6.5e-15 83.6 70 68.6
CsaV3_4G007340 Cucumis sativus L. HOM05D007805 ORTHO05D009877 8.5e-15 83.2 70 68.6
PGR142G2087 Punica granatum HOM05D007805 ORTHO05D009877 1.1e-14 82.8 64 73.4
GSVIVG01015820001 Vitis vinifera HOM05D007805 ORTHO05D009877 1.1e-14 82.8 68 75.0
CDE02G0479 Ceratophyllum demersum HOM05D000623 ORTHO05D005779 1.5e-14 82.4 67 70.1
Glyma.11G096300 Glycine max HOM05D007805 ORTHO05D009877 1.9e-14 82.0 67 73.1
Phvul.011G024400 Phaseolus vulgaris HOM05D007805 ORTHO05D009877 2.5e-14 81.6 67 76.1
QL04p061619 Quercus lobata HOM05D007805 ORTHO05D009877 2.5e-14 81.6 68 73.5
ECA233G5845 Erigeron canadensis HOM05D007805 ORTHO05D009877 7.2e-14 80.1 66 69.7
Glyma.12G022400 Glycine max HOM05D007805 ORTHO05D009877 7.2e-14 80.1 65 72.3
Lj3g0006859 Lotus japonicus HOM05D007805 ORTHO05D009877 7.2e-14 80.1 67 68.7
THA.LOC104808521 Tarenaya hassleriana HOM05D007805 ORTHO05D009877 1.2e-13 79.3 66 63.6
CiPaw.03G113200 Carya illinoinensis HOM05D007805 ORTHO05D009877 3.6e-13 77.8 70 70.0
Nitab4.5_0002015g0030 Nicotiana tabacum HOM05D007805 ORTHO05D009877 3.6e-13 77.8 67 68.7
MD09G1139100 Malus domestica HOM05D007805 ORTHO05D009877 4.7e-13 77.4 71 64.8
arahy.Tifrunner.gnm1.ann1.RTX0DF Arachis hypogaea HOM05D007805 ORTHO05D009877 6.1e-13 77.0 64 65.6
arahy.Tifrunner.gnm1.ann1.XU3UV1 Arachis hypogaea HOM05D007805 ORTHO05D009877 6.1e-13 77.0 64 65.6
PSO675G4353 Papaver somniferum HOM05D007805 ORTHO05D009877 6.1e-13 77.0 68 60.3
Potri.016G018650 Populus trichocarpa HOM05D007805 ORTHO05D009877 8.0e-13 76.6 72 70.8
Aa31LG8G8770 Aethionema arabicum HOM05D000023 ORTHO05D000014 1.0e-12 76.3 60 68.3
CANSAT64G2225 Cannabis sativa HOM05D007805 ORTHO05D009877 1.0e-12 76.3 68 66.2
HanXRQChr13g0396951 Helianthus annuus HOM05D007805 ORTHO05D009877 1.0e-12 76.3 67 68.7
PSO541G3237 Papaver somniferum HOM05D007805 ORTHO05D009877 1.0e-12 76.3 68 58.8
Prupe.3G186600 Prunus persica HOM05D007805 ORTHO05D009877 5.2e-12 73.9 68 61.8
FAN02G2902 Fragaria x ananassa HOM05D007805 ORTHO05D009877 8.8e-12 73.2 68 63.2
FAN09G3597 Fragaria x ananassa HOM05D007805 ORTHO05D009877 8.8e-12 73.2 68 63.2
RcHm_v2.0_Chr2g0153601 Rosa chinensis HOM05D007805 ORTHO05D009877 8.8e-12 73.2 68 63.2
FvH4_6g39540 Fragaria vesca HOM05D007805 ORTHO05D009877 1.2e-11 72.8 68 63.2
FAN14G4838 Fragaria x ananassa HOM05D007805 ORTHO05D009877 1.2e-11 72.8 68 63.2
Lsat_1_v5_gn_6_41501 Lactuca sativa HOM05D007805 ORTHO05D009877 2.6e-11 71.6 70 61.4
Medtr4g076090 Medicago truncatula HOM05D007805 ORTHO05D009877 3.4e-11 71.2 70 62.9
Rhsim12G0014500 Rhododendron simsii HOM05D007805 ORTHO05D009877 3.4e-11 71.2 71 60.6
Thhalv10021880m.g Eutrema salsugineum HOM05D007805 ORTHO05D009877 5.7e-11 70.5 67 56.7
Peaxi162Scf00047g02325 Petunia axillaris HOM05D007805 ORTHO05D009877 7.5e-11 70.1 70 60.0
Sopen12g002380 Solanum pennellii HOM05D007805 ORTHO05D009877 7.5e-11 70.1 70 60.0
CARHR098100 Cardamine hirsuta HOM05D007805 ORTHO05D009877 9.8e-11 69.7 66 56.1
PGSC0003DMG400024282 Solanum tuberosum HOM05D007805 ORTHO05D009877 9.8e-11 69.7 70 60.0
AUR62017845 Chenopodium quinoa HOM05D007805 ORTHO05D009877 1.3e-10 69.3 68 57.4
TPR.G21248 Trifolium pratense HOM05D007805 ORTHO05D009877 1.7e-10 68.9 69 63.8
Sp3g20010 Schrenkiella parvula HOM05D007805 ORTHO05D009877 2.2e-10 68.6 67 55.2
Solyc12g006440.2 Solanum lycopersicum HOM05D007805 ORTHO05D009877 2.8e-10 68.2 69 59.4
BcaB06g26324 Brassica carinata HOM05D007805 ORTHO05D009877 6.3e-10 67.0 67 53.7
BcaC05g28092 Brassica carinata HOM05D007805 ORTHO05D009877 6.3e-10 67.0 67 53.7
A05p26590 Brassica napus HOM05D007805 ORTHO05D009877 6.3e-10 67.0 67 53.7
C05p41160 Brassica napus HOM05D007805 ORTHO05D009877 6.3e-10 67.0 67 53.7
BolC5t32859H Brassica oleracea HOM05D007805 ORTHO05D009877 6.3e-10 67.0 67 53.7
BraA05t21534Z Brassica rapa HOM05D007805 ORTHO05D009877 6.3e-10 67.0 67 53.7
AL3G36420 Arabidopsis lyrata HOM05D007805 ORTHO05D009877 8.3e-10 66.6 65 55.4
Carub.0003s2238 Capsella rubella HOM05D007805 ORTHO05D009877 8.3e-10 66.6 70 52.9
Psat7g179400 Pisum sativum HOM05D007805 ORTHO05D009877 8.3e-10 66.6 72 61.1
AT3G22210 Arabidopsis thaliana HOM05D007805 ORTHO05D009877 1.8e-09 65.5 68 52.9
Hund18262 Selenicereus undatus HOM05D007805 ORTHO05D009877 7.7e-08 60.1 39 71.8
Pp3c13_11150 Physcomitrium patens HOM05D007805 ORTHO05D009877 3.8e-07 57.8 72 51.4
EL10Ac6g15349 Beta vulgaris HOM05D007805 ORTHO05D009877 5.0e-07 57.4 61 52.5
AagrBONN_evm.TU.Sc2ySwM_228.5835 Anthoceros agrestis HOM05D007805 ORTHO05D009877 5.5e-06 53.9 64 51.6


User provided reference genes

Program Settings