Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 5.5e-58 227.6 133 100.0
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 2.3e-48 195.7 126 92.1
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 5.3e-45 184.5 126 84.9
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 3.0e-32 142.1 127 70.1
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 3.0e-32 142.1 126 70.6
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 3.0e-32 142.1 126 70.6
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 2.0e-31 139.4 131 67.9
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 3.4e-31 138.7 126 69.0
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 3.4e-31 138.7 126 71.4
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 3.4e-31 138.7 124 68.5
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 2.8e-30 135.6 126 64.3
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 6.3e-30 134.4 133 57.1
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 1.1e-29 133.7 126 66.7
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 3.1e-29 132.1 126 67.5
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 3.1e-29 132.1 125 57.6
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 3.1e-29 132.1 125 57.6
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 3.1e-29 132.1 127 63.8
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 4.1e-29 131.7 126 63.5
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 4.1e-29 131.7 125 68.0
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 5.3e-29 131.3 126 68.3
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 5.3e-29 131.3 125 61.6
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 7.0e-29 131.0 125 67.2
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 1.6e-28 129.8 130 61.5
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 2.0e-28 129.4 126 62.7
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 2.7e-28 129.0 128 62.5
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 3.5e-28 128.6 127 66.1
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 3.5e-28 128.6 126 59.5
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 4.5e-28 128.3 126 67.5
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 4.5e-28 128.3 127 63.8
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 5.9e-28 127.9 129 58.1
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 7.7e-28 127.5 118 59.3
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 1.3e-27 126.7 130 61.5
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 1.7e-27 126.3 134 59.7
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 1.7e-27 126.3 128 62.5
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 2.2e-27 125.9 126 63.5
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 2.9e-27 125.6 125 60.0
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 5.0e-27 124.8 127 57.5
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 5.0e-27 124.8 126 56.3
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 1.1e-26 123.6 124 65.3
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 1.5e-26 123.2 126 65.1
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 1.9e-26 122.9 126 65.9
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 1.9e-26 122.9 124 63.7
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 2.5e-26 122.5 126 55.6
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 7.2e-26 120.9 126 54.8
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 3.6e-25 118.6 126 54.0
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 1.8e-24 116.3 126 61.9
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 3.0e-24 115.5 126 54.0
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 6.8e-24 114.4 100 62.0
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 2.6e-23 112.5 129 58.9
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 1.3e-22 110.2 97 60.8
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 6.3e-22 107.8 97 56.7
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 1.1e-21 107.1 97 55.7
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 7.0e-21 104.4 124 50.0
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 2.7e-20 102.4 127 55.1
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 2.7e-20 102.4 126 47.6
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 2.7e-20 102.4 126 47.6
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 2.7e-20 102.4 126 47.6
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 5.9e-20 101.3 125 57.6
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 1.3e-19 100.1 125 55.2
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 1.3e-19 100.1 126 48.4
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 1.7e-19 99.8 129 47.3
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 2.3e-19 99.4 127 55.1
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 5.0e-19 98.2 126 55.6
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 5.0e-19 98.2 128 54.7
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 6.6e-19 97.8 126 44.4
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 4.2e-18 95.1 131 45.8
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 4.2e-18 95.1 133 46.6
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 5.5e-18 94.7 129 52.7
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 7.2e-18 94.4 98 52.0
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 7.2e-18 94.4 98 52.0
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 1.2e-17 93.6 85 70.6
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 1.2e-17 93.6 94 53.2
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 1.6e-17 93.2 135 45.2
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 2.1e-17 92.8 97 50.5
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 2.8e-17 92.4 96 56.2
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 2.8e-17 92.4 96 56.2
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 6.1e-17 91.3 126 53.2
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 8.0e-17 90.9 128 56.2
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 1.0e-16 90.5 128 53.1
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 1.0e-16 90.5 128 53.1
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 1.0e-16 90.5 126 49.2
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 1.4e-16 90.1 97 64.9
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 2.3e-16 89.4 129 52.7
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 3.0e-16 89.0 128 53.1
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 3.0e-16 89.0 93 49.5
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 5.2e-16 88.2 98 51.0
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 2.6e-15 85.9 122 48.4
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 4.4e-15 85.1 98 49.0
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 5.7e-15 84.7 95 46.3
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 5.7e-15 84.7 102 50.0
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 1.3e-14 83.6 128 49.2
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 1.3e-14 83.6 128 49.2
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 3.7e-14 82.0 64 62.5
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 3.7e-14 82.0 126 43.7
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 8.3e-14 80.9 123 42.3
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 1.1e-13 80.5 74 52.7
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 1.8e-13 79.7 126 42.1
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 9.2e-13 77.4 96 45.8
AUR62021857 Chenopodium quinoa HOM05D007192 ORTHO05D009034 1.8e-08 63.2 74 45.9


User provided reference genes

Program Settings