Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 7.6e-49 196.8 97 100.0
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 3.1e-42 174.9 97 83.5
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 9.0e-42 173.3 98 82.7
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 1.2e-41 172.9 98 81.6
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 2.0e-41 172.2 97 80.4
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 2.0e-41 172.2 98 82.7
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 2.0e-41 172.2 97 79.4
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 1.3e-40 169.5 97 80.4
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 1.7e-40 169.1 98 79.6
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 2.2e-40 168.7 97 78.4
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 3.8e-40 167.9 96 81.2
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 6.4e-40 167.2 95 81.1
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 8.4e-40 166.8 96 81.2
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 8.4e-40 166.8 96 80.2
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 1.1e-39 166.4 97 81.4
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 1.1e-39 166.4 96 77.1
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 2.4e-39 165.2 98 79.6
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 2.4e-39 165.2 98 79.6
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 3.2e-39 164.9 97 78.4
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 5.4e-39 164.1 96 80.2
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 7.1e-39 163.7 97 77.3
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 7.1e-39 163.7 96 79.2
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 7.1e-39 163.7 98 76.5
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 2.1e-38 162.2 101 78.2
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 2.7e-38 161.8 97 76.3
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 2.7e-38 161.8 98 77.6
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 2.7e-38 161.8 98 78.6
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 3.5e-38 161.4 96 74.0
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 3.5e-38 161.4 101 76.2
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 3.5e-38 161.4 79 97.5
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 4.6e-38 161.0 96 79.2
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 4.6e-38 161.0 96 79.2
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 4.6e-38 161.0 96 79.2
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 6.0e-38 160.6 101 74.3
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 6.0e-38 160.6 101 74.3
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 6.0e-38 160.6 101 74.3
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 6.0e-38 160.6 98 77.6
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 7.8e-38 160.2 98 75.5
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 7.8e-38 160.2 98 75.5
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 7.8e-38 160.2 99 77.8
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 1.3e-37 159.5 97 76.3
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 2.3e-37 158.7 96 77.1
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 2.3e-37 158.7 94 75.5
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 5.1e-37 157.5 101 73.3
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 6.6e-37 157.1 96 76.0
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 1.1e-36 156.4 97 76.3
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 1.1e-36 156.4 95 73.7
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 1.5e-36 156.0 97 76.3
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 1.5e-36 156.0 103 70.9
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 1.9e-36 155.6 96 74.0
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.9e-36 155.6 96 77.1
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 2.5e-36 155.2 98 72.4
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 4.3e-36 154.5 96 75.0
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 4.3e-36 154.5 98 74.5
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 5.6e-36 154.1 97 70.1
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 5.6e-36 154.1 92 77.2
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 5.6e-36 154.1 100 77.0
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 7.3e-36 153.7 97 71.1
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 7.3e-36 153.7 125 64.0
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 9.6e-36 153.3 97 72.2
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 1.3e-35 152.9 97 72.2
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 2.1e-35 152.1 91 78.0
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 2.8e-35 151.8 97 72.2
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 2.8e-35 151.8 95 73.7
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 4.8e-35 151.0 98 71.4
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 4.8e-35 151.0 95 72.6
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 4.8e-35 151.0 97 71.1
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 6.2e-35 150.6 97 71.1
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 6.2e-35 150.6 97 75.3
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 8.1e-35 150.2 95 71.6
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 1.1e-34 149.8 91 74.7
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 1.1e-34 149.8 95 73.7
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 1.4e-34 149.4 97 69.1
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 1.4e-34 149.4 97 69.1
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 1.4e-34 149.4 97 69.1
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 1.4e-34 149.4 97 69.1
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 1.8e-34 149.1 91 74.7
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 1.8e-34 149.1 96 71.9
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 2.4e-34 148.7 95 70.5
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 3.1e-34 148.3 97 68.0
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 5.3e-34 147.5 97 68.0
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 6.9e-34 147.1 97 68.0
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 1.5e-33 146.0 91 73.6
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 2.6e-33 145.2 96 71.9
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 2.6e-33 145.2 97 64.9
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 5.8e-33 144.1 88 72.7
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 1.3e-32 142.9 104 66.3
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 3.8e-32 141.4 95 73.7
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 3.8e-32 141.4 98 68.4
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 6.4e-32 140.6 94 69.1
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 3.2e-31 138.3 92 67.4
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 3.2e-31 138.3 92 67.4
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 4.2e-31 137.9 79 79.7
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 4.2e-31 137.9 92 67.4
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 7.1e-31 137.1 92 67.4
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 7.1e-31 137.1 92 67.4
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 7.1e-31 137.1 80 80.0
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 9.3e-31 136.7 91 67.0
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 2.7e-30 135.2 87 73.6
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 2.3e-29 132.1 90 70.0
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 1.9e-28 129.0 80 77.5
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 1.9e-28 129.0 79 74.7
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 3.7e-27 124.8 83 65.1
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 4.5e-25 117.9 81 70.4
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 7.6e-25 117.1 62 83.9
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 3.2e-23 111.7 104 56.7
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 4.2e-23 111.3 89 61.8
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 1.8e-21 105.9 85 57.6
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 4.3e-20 101.3 71 62.0
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 1.1e-18 96.7 80 55.0
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 5.3e-18 94.4 92 54.3
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 2.2e-16 89.0 112 46.4
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 7.9e-14 80.5 86 48.8
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 1.1e-12 76.6 66 59.1
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 9.7e-12 73.6 69 55.1
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.4e-10 69.7 46 67.4
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 6.5e-08 60.8 41 70.7
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 6.5e-08 60.8 38 63.2
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 7.2e-07 57.4 62 43.5


User provided reference genes

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