Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 5.6e-101 370.9 185 100.0
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 1.2e-92 343.2 185 91.4
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 2.3e-78 295.8 185 78.4
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 3.0e-78 295.4 185 76.8
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 2.5e-77 292.4 186 77.4
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 2.1e-76 289.3 185 75.7
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 3.6e-76 288.5 186 75.3
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 2.4e-75 285.8 186 72.0
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 6.9e-75 284.3 179 73.2
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 9.0e-75 283.9 183 74.9
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 1.2e-74 283.5 185 75.1
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 9.9e-74 280.4 184 73.4
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 1.3e-73 280.0 186 71.5
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 2.9e-73 278.9 181 74.6
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 1.1e-72 276.9 180 75.6
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.1e-72 276.9 173 75.1
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 1.4e-72 276.6 171 76.6
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 1.9e-72 276.2 175 76.0
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 3.2e-72 275.4 173 74.0
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 5.4e-72 274.6 175 74.3
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 9.3e-72 273.9 185 69.2
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 1.6e-71 273.1 173 74.0
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 1.6e-71 273.1 169 76.9
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 2.1e-71 272.7 160 80.0
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 2.1e-71 272.7 183 72.7
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 2.7e-71 272.3 177 70.6
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 3.5e-71 271.9 184 69.0
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 4.6e-71 271.6 185 69.7
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 6.0e-71 271.2 184 69.6
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 7.9e-71 270.8 162 78.4
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 1.0e-70 270.4 185 72.4
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 1.3e-70 270.0 184 72.8
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 1.3e-70 270.0 184 69.0
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 1.8e-70 269.6 181 72.4
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 2.3e-70 269.2 184 69.0
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 3.0e-70 268.9 184 69.0
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 3.9e-70 268.5 171 76.6
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 5.1e-70 268.1 182 71.4
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 6.7e-70 267.7 181 71.8
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 6.7e-70 267.7 183 69.9
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 6.7e-70 267.7 182 68.7
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 8.7e-70 267.3 182 68.7
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 8.7e-70 267.3 183 70.5
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 8.7e-70 267.3 161 79.5
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 1.1e-69 266.9 181 72.4
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 1.1e-69 266.9 181 72.4
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 1.1e-69 266.9 172 75.0
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 1.5e-69 266.5 181 68.5
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 1.5e-69 266.5 183 72.1
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 1.5e-69 266.5 176 72.7
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 1.9e-69 266.2 182 68.7
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 3.3e-69 265.4 181 71.8
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 3.3e-69 265.4 186 67.7
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 7.4e-69 264.2 182 68.1
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 9.6e-69 263.8 184 66.8
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 9.6e-69 263.8 183 71.6
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 1.3e-68 263.5 183 71.6
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 2.1e-68 262.7 185 68.6
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 2.1e-68 262.7 185 69.2
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 2.8e-68 262.3 174 72.4
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 3.6e-68 261.9 183 67.8
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 4.8e-68 261.5 183 71.0
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 8.1e-68 260.8 184 69.0
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 1.1e-67 260.4 188 66.0
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 1.1e-67 260.4 173 68.2
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 1.1e-67 260.4 176 68.8
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 1.1e-67 260.4 162 74.7
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 1.4e-67 260.0 186 65.1
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 2.4e-67 259.2 184 69.6
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 2.4e-67 259.2 184 71.2
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 3.1e-67 258.8 185 67.6
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 3.1e-67 258.8 185 70.8
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 3.1e-67 258.8 190 67.9
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 4.0e-67 258.5 179 66.5
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 1.2e-66 256.9 184 70.7
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 1.2e-66 256.9 174 70.7
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 1.5e-66 256.5 169 69.2
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 1.7e-65 253.1 163 70.6
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 2.2e-65 252.7 185 64.3
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 2.9e-65 252.3 179 67.0
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 1.9e-64 249.6 182 64.3
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 1.9e-64 249.6 182 66.5
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 3.2e-64 248.8 181 69.1
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 5.5e-64 248.1 183 63.4
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 7.1e-64 247.7 176 64.8
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 1.2e-63 246.9 179 66.5
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 2.7e-63 245.7 182 65.9
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 1.9e-61 239.6 168 67.9
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 2.8e-60 235.7 182 61.0
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 2.8e-60 235.7 190 66.8
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 6.2e-60 234.6 183 65.6
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 4.0e-59 231.9 183 62.8
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 2.6e-58 229.2 142 74.6
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 1.0e-57 227.3 288 46.5
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.3e-57 226.9 143 76.2
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 1.4e-56 223.4 181 57.5
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 5.1e-54 214.9 119 84.9
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 6.3e-52 208.0 174 61.5
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 2.1e-47 193.0 183 50.8
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 1.0e-46 190.7 181 50.3
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 6.9e-43 177.9 156 53.8
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 2.0e-42 176.4 132 67.4
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 5.7e-37 158.3 127 66.9
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 9.7e-37 157.5 172 42.4
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 2.4e-35 152.9 158 46.2
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.9e-24 116.7 89 66.3
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 1.0e-22 110.9 66 71.2
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.0e-22 110.9 93 62.4
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 8.8e-22 107.8 174 36.8
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 1.2e-21 107.5 180 33.9
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 3.3e-21 105.9 169 36.1
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-18 97.1 77 62.3
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 8.3e-12 74.7 105 39.0
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 4.2e-08 62.4 49 55.1
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 1.2e-07 60.8 38 68.4
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 6.1e-07 58.5 32 75.0


User provided reference genes

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