Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 3.7e-216 754.6 383 100.0
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 1.6e-187 659.4 383 88.3
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 4.8e-163 578.2 385 78.7
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 1.1e-130 470.7 375 68.3
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 1.7e-120 436.8 379 63.1
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 2.2e-115 419.9 267 79.0
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 2.2e-115 419.9 377 63.4
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 2.2e-115 419.9 378 62.7
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 3.7e-115 419.1 378 60.8
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 8.2e-115 417.9 379 61.2
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 1.1e-114 417.5 379 60.9
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 7.0e-114 414.8 375 60.5
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 1.3e-112 410.6 379 59.6
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 3.8e-112 409.1 381 59.8
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 6.5e-112 408.3 374 61.0
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 8.5e-112 407.9 379 58.8
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 8.0e-110 401.4 379 58.8
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 8.8e-109 397.9 379 59.9
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 1.2e-108 397.5 369 58.3
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 1.5e-108 397.1 421 54.6
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 7.5e-108 394.8 377 57.8
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 9.8e-108 394.4 359 59.9
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 2.2e-107 393.3 374 61.0
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 8.3e-107 391.3 379 58.8
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 1.6e-105 387.1 378 56.9
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.3e-104 384.0 313 63.3
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 3.8e-104 382.5 369 57.2
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 1.9e-103 380.2 330 61.2
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 1.5e-100 370.5 282 67.7
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 1.5e-100 370.5 379 55.9
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 7.5e-100 368.2 382 55.0
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.3e-99 367.5 382 55.0
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 1.7e-99 367.1 304 64.1
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 2.8e-99 366.3 379 56.2
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 6.3e-99 365.2 377 56.2
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 3.1e-98 362.8 377 54.9
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 3.1e-98 362.8 280 64.6
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 5.4e-98 362.1 326 60.1
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 5.4e-98 362.1 364 54.4
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 2.7e-97 359.8 270 67.0
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 3.5e-97 359.4 273 66.3
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 1.7e-96 357.1 270 67.0
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 2.9e-96 356.3 313 60.4
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 1.5e-95 354.0 243 72.0
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 3.3e-95 352.8 296 61.5
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 3.3e-95 352.8 360 54.7
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 7.3e-95 351.7 267 68.5
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 9.5e-95 351.3 264 66.3
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.1e-94 350.1 360 54.4
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 2.8e-94 349.7 270 66.3
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 3.6e-94 349.4 288 63.9
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 4.7e-94 349.0 360 55.0
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 6.1e-94 348.6 365 54.0
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 1.0e-93 347.8 256 69.5
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 1.0e-93 347.8 244 70.1
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 1.4e-93 347.4 355 57.5
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 2.3e-93 346.7 356 53.9
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 6.8e-93 345.1 360 54.2
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 3.4e-92 342.8 272 65.1
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 4.4e-92 342.4 268 65.7
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 4.4e-92 342.4 243 72.0
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 7.5e-92 341.7 354 54.5
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 7.5e-92 341.7 270 65.2
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 1.7e-91 340.5 365 53.4
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 1.7e-91 340.5 270 65.6
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 4.9e-91 339.0 383 51.4
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 4.9e-91 339.0 261 67.4
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 1.1e-90 337.8 384 52.1
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 1.4e-90 337.4 321 57.9
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 3.2e-90 336.3 261 65.9
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 3.2e-90 336.3 264 65.9
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 4.1e-90 335.9 375 52.0
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 9.2e-90 334.7 322 56.5
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 9.2e-90 334.7 414 50.2
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 1.6e-89 334.0 364 53.3
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 2.0e-89 333.6 335 56.1
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 2.7e-89 333.2 272 62.5
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 3.5e-89 332.8 384 50.0
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 3.5e-89 332.8 384 50.0
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 7.8e-89 331.6 365 51.8
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 1.3e-88 330.9 264 64.8
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 1.7e-88 330.5 308 58.1
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 2.3e-88 330.1 270 63.3
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 3.0e-88 329.7 385 50.1
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 3.9e-88 329.3 323 55.7
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 5.0e-88 328.9 336 55.4
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 6.6e-88 328.6 275 64.0
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 8.6e-88 328.2 334 56.0
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 1.5e-87 327.4 305 59.3
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 2.5e-87 326.6 319 56.1
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 2.5e-87 326.6 382 50.5
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 3.3e-87 326.2 295 61.0
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 9.5e-87 324.7 319 55.2
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 6.2e-86 322.0 335 54.0
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 1.8e-85 320.5 358 53.4
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 6.8e-85 318.5 292 58.2
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 1.7e-83 313.9 257 62.3
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 4.9e-83 312.4 239 64.9
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 8.3e-83 311.6 216 71.8
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 1.9e-82 310.5 221 71.5
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 5.4e-82 308.9 205 73.7
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 2.7e-81 306.6 193 76.2
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 1.0e-80 304.7 269 59.5
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 1.9e-74 283.9 187 73.3
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 2.4e-74 283.5 238 67.6
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 5.8e-68 262.3 205 63.4
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 1.6e-65 254.2 269 48.0
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 7.8e-65 251.9 265 47.9
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 3.0e-64 250.0 260 47.3
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 6.6e-64 248.8 184 64.1
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 4.3e-63 246.1 153 79.1
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 5.8e-52 209.1 121 80.2
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 1.7e-51 207.6 216 48.6
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 2.2e-51 207.2 169 59.2
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 4.9e-51 206.1 166 59.0
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 2.7e-49 200.3 187 53.5
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 6.6e-48 195.7 296 39.5
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 1.4e-45 188.0 101 85.1
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 9.0e-29 132.1 79 73.4
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 5.9e-28 129.4 67 85.1
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 2.6e-20 104.0 187 39.0
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 1.3e-14 85.1 58 67.2
Sabra02G0004500 Salix brachista HOM05D000440 ORTHO05D000295 1.1e-13 82.0 141 43.3
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 2.7e-09 67.4 138 33.3
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 2.6e-07 60.8 43 67.4
Cpa.g.c30633.1 Carica papaya HOM05D005712 ORTHO05D120172 2.6e-07 60.8 61 60.7
Cpa.g.c35203 Carica papaya HOM05D005712 ORTHO05D007865 1.7e-06 58.2 66 48.5
C08p20390 Brassica napus HOM05D005712 ORTHO05D032168 2.8e-06 57.4 139 33.1
BcaC07g39055 Brassica carinata HOM05D005712 ORTHO05D032168 4.8e-06 56.6 155 29.7


User provided reference genes

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