Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 8.1e-100 367.1 187 100.0
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 4.3e-93 344.7 188 94.7
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 3.2e-88 328.6 188 89.9
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 4.1e-75 285.0 189 78.3
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 1.7e-73 279.6 188 75.5
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 3.8e-73 278.5 178 77.0
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 5.0e-73 278.1 186 75.3
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 1.4e-72 276.6 185 76.8
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 1.4e-72 276.6 181 76.2
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 1.2e-71 273.5 191 75.4
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 2.7e-71 272.3 187 73.3
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 3.6e-71 271.9 178 74.7
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 4.7e-71 271.6 185 75.1
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 6.1e-71 271.2 185 75.7
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 1.4e-70 270.0 194 71.6
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 1.4e-70 270.0 194 71.6
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 3.0e-70 268.9 185 74.6
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 3.9e-70 268.5 189 74.1
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 5.1e-70 268.1 180 75.0
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 2.6e-69 265.8 179 73.2
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 3.3e-69 265.4 183 74.3
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 4.4e-69 265.0 187 72.2
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 5.7e-69 264.6 179 72.6
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 9.7e-69 263.8 178 71.3
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 9.7e-69 263.8 179 73.2
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 1.7e-68 263.1 181 72.9
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 2.2e-68 262.7 180 74.4
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 2.8e-68 262.3 183 74.3
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 4.8e-68 261.5 180 73.9
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 1.1e-67 260.4 170 75.3
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 1.1e-67 260.4 174 74.1
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 4.1e-67 258.5 182 73.6
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 7.0e-67 257.7 175 70.9
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 9.1e-67 257.3 179 71.5
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 1.5e-66 256.5 181 72.9
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 1.5e-66 256.5 178 73.6
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 2.0e-66 256.1 188 67.6
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 2.0e-66 256.1 187 71.7
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 3.5e-66 255.4 183 70.5
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 3.5e-66 255.4 187 69.5
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 5.9e-66 254.6 188 67.0
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 1.0e-65 253.8 173 74.0
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 1.3e-65 253.4 175 70.3
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 1.3e-65 253.4 180 70.0
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 2.2e-65 252.7 181 72.4
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 2.2e-65 252.7 187 69.0
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 2.9e-65 252.3 178 68.0
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 3.8e-65 251.9 192 70.3
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 3.8e-65 251.9 187 71.7
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 5.0e-65 251.5 180 71.1
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 6.5e-65 251.1 181 71.8
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 1.5e-64 250.0 166 73.5
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 5.5e-64 248.1 182 72.0
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 5.5e-64 248.1 188 71.3
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 3.6e-63 245.4 182 67.6
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 8.0e-63 244.2 189 67.2
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 5.2e-62 241.5 173 68.8
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 6.7e-62 241.1 172 70.3
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 2.0e-61 239.6 163 69.9
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 3.3e-61 238.8 171 69.6
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 3.3e-61 238.8 162 72.2
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 1.7e-60 236.5 173 68.2
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 2.2e-60 236.1 180 66.7
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 3.7e-60 235.3 172 68.0
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 3.7e-60 235.3 172 68.0
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 4.8e-60 235.0 172 68.6
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 6.3e-60 234.6 187 64.2
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 8.2e-60 234.2 187 69.0
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 8.2e-60 234.2 187 69.0
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 8.2e-60 234.2 172 67.4
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 8.2e-60 234.2 172 67.4
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 8.2e-60 234.2 191 62.3
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 1.1e-59 233.8 172 67.4
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 1.8e-59 233.0 183 65.0
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 2.0e-58 229.6 178 64.0
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 4.5e-58 228.4 145 79.3
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 4.5e-58 228.4 175 64.0
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 5.9e-58 228.0 172 65.7
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 1.0e-57 227.3 172 66.3
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 2.9e-57 225.7 167 67.7
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 8.5e-57 224.2 184 62.5
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 1.5e-56 223.4 251 50.6
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 3.2e-56 222.2 154 73.4
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 4.2e-56 221.9 165 68.5
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 9.4e-56 220.7 136 78.7
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 4.0e-54 215.3 167 64.7
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 8.8e-54 214.2 132 77.3
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 1.3e-52 210.3 144 72.2
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 3.7e-52 208.8 172 61.6
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 6.3e-52 208.0 136 76.5
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 2.7e-50 202.6 140 72.1
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 7.7e-50 201.1 173 60.7
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 2.4e-43 179.5 193 53.4
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 7.0e-43 177.9 183 49.2
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 6.1e-39 164.9 122 65.6
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 2.3e-38 162.9 177 53.7
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 8.9e-38 161.0 170 53.5
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 4.4e-37 158.7 163 50.3
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 4.9e-36 155.2 198 47.0
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 1.4e-35 153.7 101 76.2
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 2.8e-31 139.4 81 79.0
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 7.5e-29 131.3 76 86.8
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 4.9e-28 128.6 125 53.6
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 4.1e-27 125.6 87 73.6
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 4.6e-26 122.1 170 42.4
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 6.6e-25 118.2 172 44.2
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 2.0e-21 106.7 176 36.4
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 2.6e-21 106.3 74 66.2
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 3.2e-19 99.4 139 40.3
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 3.1e-14 82.8 61 60.7
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 6.6e-09 65.1 40 72.5
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 7.3e-08 61.6 79 44.3
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 1.4e-06 57.4 36 75.0


User provided reference genes

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