Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.005G248600 Populus trichocarpa HOM05D006241 ORTHO05D007842 1.5e-38 162.2 69 100.0
Sabra05G0192000 Salix brachista HOM05D006241 ORTHO05D007842 6.2e-37 156.8 69 95.7
Potri.002G012700 Populus trichocarpa HOM05D006241 ORTHO05D007842 1.3e-34 149.1 69 91.3
arahy.Tifrunner.gnm1.ann1.1F1YZI Arachis hypogaea HOM05D006241 ORTHO05D007842 4.6e-32 140.6 69 82.6
arahy.Tifrunner.gnm1.ann1.1NSU2H Arachis hypogaea HOM05D006241 ORTHO05D007842 4.6e-32 140.6 69 82.6
arahy.Tifrunner.gnm1.ann1.4R2MNP Arachis hypogaea HOM05D006241 ORTHO05D007842 4.6e-32 140.6 69 82.6
arahy.Tifrunner.gnm1.ann1.L8CN1K Arachis hypogaea HOM05D006241 ORTHO05D007842 4.6e-32 140.6 69 82.6
Atru.chr13.161 Acer truncatum HOM05D006241 ORTHO05D007842 7.8e-32 139.8 70 82.9
Manes.18G006720 Manihot esculenta HOM05D006241 ORTHO05D007842 1.0e-31 139.4 69 85.5
FvH4_2g37630 Fragaria vesca HOM05D006241 ORTHO05D007842 1.7e-31 138.7 68 85.3
Manes.05G136000 Manihot esculenta HOM05D006241 ORTHO05D007842 1.7e-31 138.7 69 85.5
Gohir.A01G107600 Gossypium hirsutum HOM05D006241 ORTHO05D007842 2.3e-31 138.3 67 85.1
FAN15G0812 Fragaria x ananassa HOM05D006241 ORTHO05D007842 3.9e-31 137.5 71 81.7
Aa31LG4G6300 Aethionema arabicum HOM05D006241 ORTHO05D007842 5.1e-31 137.1 69 81.2
CiPaw.07G140100 Carya illinoinensis HOM05D006241 ORTHO05D007842 6.6e-31 136.7 68 80.9
Actinidia17033 Actinidia chinensis HOM05D006241 ORTHO05D007842 8.6e-31 136.3 67 82.1
SGA_v2.0_scaffold25G11191 Striga asiatica HOM05D006241 ORTHO05D007842 8.6e-31 136.3 62 88.7
THA.LOC104811457 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 8.6e-31 136.3 69 79.7
Lj3g0010530 Lotus japonicus HOM05D006241 ORTHO05D007842 1.1e-30 136.0 69 84.1
Prupe.1G355800 Prunus persica HOM05D006241 ORTHO05D007842 1.1e-30 136.0 64 82.8
CARHR069760 Cardamine hirsuta HOM05D006241 ORTHO05D007842 1.5e-30 135.6 69 78.3
CiPaw.08G071900 Carya illinoinensis HOM05D006241 ORTHO05D007842 1.5e-30 135.6 68 80.9
Cc10_g00830 Coffea canephora HOM05D006241 ORTHO05D007842 1.5e-30 135.6 66 78.8
QL02p013848 Quercus lobata HOM05D006241 ORTHO05D007842 1.5e-30 135.6 68 77.9
THA.LOC109116669 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 1.9e-30 135.2 69 78.3
AL2G36270 Arabidopsis lyrata HOM05D006241 ORTHO05D007842 2.5e-30 134.8 67 80.6
AT1G76200 Arabidopsis thaliana HOM05D006241 ORTHO05D007842 2.5e-30 134.8 67 80.6
CANSAT54G0965 Cannabis sativa HOM05D006241 ORTHO05D007842 2.5e-30 134.8 65 84.6
PGR031G1817 Punica granatum HOM05D006241 ORTHO05D007842 2.5e-30 134.8 66 84.8
Duzib116G0823 Durio zibethinus HOM05D006241 ORTHO05D007842 3.3e-30 134.4 67 82.1
Nn5g30908 Nelumbo nucifera HOM05D006241 ORTHO05D007842 7.3e-30 133.3 66 80.3
Actinidia15484 Actinidia chinensis HOM05D006241 ORTHO05D007842 9.5e-30 132.9 67 79.1
COL.COLO4_21601 Corchorus olitorius HOM05D006241 ORTHO05D007842 9.5e-30 132.9 67 82.1
Gohir.D01G094000 Gossypium hirsutum HOM05D006241 ORTHO05D007842 9.5e-30 132.9 67 82.1
Gorai.002G119300 Gossypium raimondii HOM05D006241 ORTHO05D007842 9.5e-30 132.9 67 82.1
Gorai.009G189100 Gossypium raimondii HOM05D006241 ORTHO05D007842 9.5e-30 132.9 67 80.6
Migut.N03197 Erythranthe guttata HOM05D006241 ORTHO05D007842 1.2e-29 132.5 63 85.7
Duzib093G0667 Durio zibethinus HOM05D006241 ORTHO05D007842 1.6e-29 132.1 67 80.6
Cpa.g.sc222.6 Carica papaya HOM05D006241 ORTHO05D007842 2.1e-29 131.7 65 83.1
Duzib041G0756 Durio zibethinus HOM05D006241 ORTHO05D007842 2.1e-29 131.7 67 77.6
TWI12G0416 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 2.8e-29 131.3 65 86.2
TWI56G0163 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 2.8e-29 131.3 65 84.6
CAN.G311.105 Capsicum annuum HOM05D006241 ORTHO05D007842 3.6e-29 131.0 65 80.0
Gohir.D05G183800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 3.6e-29 131.0 67 79.1
Ca_19011_v3 Cicer arietinum L. HOM05D006241 ORTHO05D007842 4.7e-29 130.6 66 83.3
MELO3C017010.2 Cucumis melo HOM05D006241 ORTHO05D007842 4.7e-29 130.6 70 81.4
BcaB02g07055 Brassica carinata HOM05D006241 ORTHO05D007842 6.2e-29 130.2 67 77.6
Gohir.A05G180800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 8.1e-29 129.8 67 79.1
CsaV3_4G037120 Cucumis sativus L. HOM05D006241 ORTHO05D007842 1.1e-28 129.4 65 83.1
Thecc.08G056300 Theobroma cacao HOM05D006241 ORTHO05D007842 1.1e-28 129.4 67 77.6
CSS0008517 Camellia sinensis var. sinensis HOM05D006241 ORTHO05D007842 1.4e-28 129.0 66 80.3
Ciclev10010113m.g Citrus clementina HOM05D006241 ORTHO05D007842 1.4e-28 129.0 67 77.6
Thhalv10019410m.g Eutrema salsugineum HOM05D006241 ORTHO05D007842 1.8e-28 128.6 69 78.3
Glyma.11G099500 Glycine max HOM05D006241 ORTHO05D007842 1.8e-28 128.6 69 78.3
Psat7g177480 Pisum sativum HOM05D006241 ORTHO05D007842 1.8e-28 128.6 70 80.0
Carub.0002s2310 Capsella rubella HOM05D006241 ORTHO05D007842 3.1e-28 127.9 64 79.7
Sp5g31350 Schrenkiella parvula HOM05D006241 ORTHO05D007842 3.1e-28 127.9 64 79.7
PGSC0003DMG400009898 Solanum tuberosum HOM05D006241 ORTHO05D007842 4.0e-28 127.5 65 78.5
Cfa014051 Carpinus fangiana HOM05D006241 ORTHO05D007842 5.2e-28 127.1 64 78.1
CDE05G0950 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 8.9e-28 126.3 69 73.9
CDE05G1511 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 8.9e-28 126.3 69 73.9
Glyma.12G025500 Glycine max HOM05D006241 ORTHO05D007842 8.9e-28 126.3 69 76.8
TAR376G1175 Trochodendron aralioides HOM05D006241 ORTHO05D007842 1.2e-27 125.9 60 81.7
BcaC08g47119 Brassica carinata HOM05D006241 ORTHO05D007842 1.5e-27 125.6 65 75.4
BcaC08g47281 Brassica carinata HOM05D006241 ORTHO05D007842 1.5e-27 125.6 65 75.4
A07p41770 Brassica napus HOM05D006241 ORTHO05D007842 1.5e-27 125.6 65 75.4
C06p50150 Brassica napus HOM05D006241 ORTHO05D007842 1.5e-27 125.6 65 75.4
BolC6t40055H Brassica oleracea HOM05D006241 ORTHO05D007842 1.5e-27 125.6 65 75.4
Eucgr.F01733 Eucalyptus grandis HOM05D006241 ORTHO05D007842 2.0e-27 125.2 60 83.3
TAR381G1678 Trochodendron aralioides HOM05D006241 ORTHO05D007842 2.0e-27 125.2 62 79.0
PSO357G0248 Papaver somniferum HOM05D006241 ORTHO05D007842 2.6e-27 124.8 77 67.5
BcaC08g47115 Brassica carinata HOM05D006241 ORTHO05D007842 3.4e-27 124.4 64 76.6
A07p28590 Brassica napus HOM05D006241 ORTHO05D007842 3.4e-27 124.4 67 74.6
PSO170G5266 Papaver somniferum HOM05D006241 ORTHO05D007842 4.4e-27 124.0 77 67.5
Lalb_Chr17g0337811 Lupinus albus HOM05D006241 ORTHO05D007842 5.8e-27 123.6 65 78.5
Phvul.011G027800 Phaseolus vulgaris HOM05D006241 ORTHO05D007842 7.6e-27 123.2 67 76.1
BraA07t31707Z Brassica rapa HOM05D006241 ORTHO05D007842 9.9e-27 122.9 66 74.2
Dinv31923 Davidia involucrata HOM05D006241 ORTHO05D007842 2.2e-26 121.7 60 78.3
Dinv39579 Davidia involucrata HOM05D006241 ORTHO05D007842 2.2e-26 121.7 60 78.3
Aqoxy6G01804 Aquilegia oxysepala HOM05D006241 ORTHO05D007842 6.4e-26 120.2 56 82.1
BraA07t30500Z Brassica rapa HOM05D006241 ORTHO05D007842 6.4e-26 120.2 61 77.0
Lalb_Chr10g0094931 Lupinus albus HOM05D006241 ORTHO05D007842 8.4e-26 119.8 73 71.2
Lsat_1_v5_gn_8_133721 Lactuca sativa HOM05D006241 ORTHO05D007842 3.2e-25 117.9 58 79.3
BcaB05g24973 Brassica carinata HOM05D006241 ORTHO05D007842 4.1e-25 117.5 59 76.3
BcaC08g45539 Brassica carinata HOM05D006241 ORTHO05D007842 5.4e-25 117.1 61 73.8
C06p32170 Brassica napus HOM05D006241 ORTHO05D007842 5.4e-25 117.1 61 73.8
BolC6t38340H Brassica oleracea HOM05D006241 ORTHO05D007842 5.4e-25 117.1 61 73.8
BraA02t07081Z Brassica rapa HOM05D006241 ORTHO05D007842 4.6e-24 114.0 57 77.2
GSVIVG01008691001 Vitis vinifera HOM05D006241 ORTHO05D007842 6.0e-24 113.6 54 81.5
ECA248G1104 Erigeron canadensis HOM05D006241 ORTHO05D007842 7.8e-24 113.2 63 74.6
ATR0661G361 Amborella trichopoda HOM05D006241 ORTHO05D007842 1.7e-23 112.1 66 69.7
AagrBONN_evm.TU.Sc2ySwM_117.850 Anthoceros agrestis HOM05D006241 ORTHO05D007842 3.3e-22 107.8 62 66.1
Os05g0122900 Oryza sativa ssp. japonica HOM05D006241 ORTHO05D007842 5.6e-22 107.1 60 73.3
MD08G1003800 Malus domestica HOM05D006241 ORTHO05D007842 9.6e-22 106.3 51 82.4
FAN20G1861 Fragaria x ananassa HOM05D006241 ORTHO05D007842 1.2e-21 105.9 50 86.0
RcHm_v2.0_Chr6g0304101 Rosa chinensis HOM05D006241 ORTHO05D007842 2.1e-21 105.1 50 86.0
Nitab4.5_0000588g0230 Nicotiana tabacum HOM05D006241 ORTHO05D007842 2.8e-21 104.8 51 82.4
MD15G1003400 Malus domestica HOM05D006241 ORTHO05D007842 4.7e-21 104.0 50 82.0
Pp3c21_21340 Physcomitrium patens HOM05D006241 ORTHO05D007842 8.1e-21 103.2 67 65.7
VMungo1127G1075 Vigna mungo HOM05D006241 ORTHO05D007842 1.1e-20 102.8 52 80.8
Pp3c18_1920 Physcomitrium patens HOM05D006241 ORTHO05D007842 3.1e-20 101.3 67 64.2
Mapoly0108s0047 Marchantia polymorpha HOM05D006241 ORTHO05D007842 6.9e-20 100.1 63 63.5
Zm00001eb294120 Zea mays HOM05D006241 ORTHO05D007842 1.5e-19 99.0 60 70.0
Zm00001eb356460 Zea mays HOM05D006241 ORTHO05D007842 1.5e-19 99.0 60 70.0
Mapoly0103s0030 Marchantia polymorpha HOM05D006241 ORTHO05D007842 2.6e-19 98.2 60 63.3
HanXRQChr17g0555751 Helianthus annuus HOM05D006241 ORTHO05D007842 4.9e-18 94.0 51 76.5
HanXRQChr17g0554651 Helianthus annuus HOM05D006241 ORTHO05D007842 6.4e-18 93.6 51 74.5
Hund08526 Selenicereus undatus HOM05D006241 ORTHO05D007842 6.4e-18 93.6 53 77.4
Os06g0725400 Oryza sativa ssp. japonica HOM05D006241 ORTHO05D007842 1.9e-17 92.0 60 66.7
MBI19_g43741_MAGBIO Magnolia biondii HOM05D006241 ORTHO05D007842 2.1e-16 88.6 48 70.8
HPP92_021050 Vanilla planifolia HOM05D006241 ORTHO05D007842 2.1e-16 88.6 53 71.7
BolC2t09367H Brassica oleracea HOM05D006241 ORTHO05D007842 3.9e-15 84.3 45 73.3
Sabra07G0051400 Salix brachista HOM05D006241 ORTHO05D349851 3.3e-14 81.3 51 72.5
SalBow6G4847 Salvia bowleyana HOM05D006241 ORTHO05D007842 4.3e-14 80.9 47 74.5
vmacro04395 Vaccinium macrocarpon HOM05D006241 ORTHO05D007842 1.3e-10 69.3 33 81.8
unitig_746.g26818 Utricularia gibba HOM05D003604 ORTHO05D000209 4.9e-10 67.4 32 78.1
ClCG05G015200 Citrullus lanatus HOM05D006241 ORTHO05D007842 1.1e-09 66.2 32 78.1
DCAR_013903 Daucus carota HOM05D006241 ORTHO05D007842 1.9e-09 65.5 50 58.0
Ah.01g001690 Amaranthus hybridus HOM05D006241 ORTHO05D007842 3.2e-09 64.7 36 72.2
Sed0002381 Sechium edule HOM05D006241 ORTHO05D007842 5.4e-09 63.9 32 75.0
AUR62015196 Chenopodium quinoa HOM05D006241 ORTHO05D007842 7.1e-09 63.5 36 69.4
AUR62017658 Chenopodium quinoa HOM05D006241 ORTHO05D007842 7.1e-09 63.5 36 69.4
Ah.01g013010 Amaranthus hybridus HOM05D006241 ORTHO05D007842 1.2e-08 62.8 36 69.4
Nn6g31777 Nelumbo nucifera HOM05D006241 ORTHO05D007842 1.2e-08 62.8 36 63.9
Medtr4g075160 Medicago truncatula HOM05D006241 ORTHO05D007842 2.7e-08 61.6 38 68.4
DCAR_016755 Daucus carota HOM05D006241 ORTHO05D007842 1.3e-07 59.3 32 68.8
MBI19_g35281_MAGBIO Magnolia biondii HOM05D006241 ORTHO05D007842 3.9e-07 57.8 33 60.6


User provided reference genes

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